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Lsi04G016750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G016750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionJacalin-related lectin 19-like
Genome locationchr04:24171285..24173347
RNA-Seq ExpressionLsi04G016750
SyntenyLsi04G016750
Gene Ontology termsGO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041597.1 jacalin-related lectin 19-like [Cucumis melo var. makuwa]3.6e-1361.4Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        H+IRSLT E+N++S GP+G E G +F FPTTGL+KIV FHG+S W+LD+IG   +PI
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

KAG6607646.1 Jacalin-related lectin 3, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1466.67Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        H+IRSLT E+N+R+ GPFG E+G +F FPTTGL+KIV FHG+  WYLDSIG   VPI
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

XP_031738576.1 jacalin-related lectin 19-like [Cucumis sativus]1.2e-1363.16Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        H+IRSLT E+NK+S GP+G E G +F FPTTGL+KIV FHG+S W+LD+IG   +PI
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

XP_038898849.1 jacalin-related lectin 3-like isoform X1 [Benincasa hispida]3.0e-2071.43Show/hide
Query:  DHGHLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIH-NTIISRVK
        D  ++IRSLT ESNKRSFGPFG   G  FWFPT+GLVK+V FHGK+ W+LDSIGIKVVP+H NTIIS V+
Subjt:  DHGHLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIH-NTIISRVK

XP_038898850.1 jacalin-related lectin 19-like isoform X2 [Benincasa hispida]3.0e-2071.43Show/hide
Query:  DHGHLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIH-NTIISRVK
        D  ++IRSLT ESNKRSFGPFG   G  FWFPT+GLVK+V FHGK+ W+LDSIGIKVVP+H NTIIS V+
Subjt:  DHGHLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIH-NTIISRVK

TrEMBL top hitse value%identityAlignment
A0A0A0LDX5 Uncharacterized protein1.5e-1263.93Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNTI
        ++IRSL+LESNK+ +GPFG E GTRF FPT+G  KIVSFHG S  YL+SIGI V+P+ N +
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNTI

A0A0A0LG45 Jacalin-type lectin domain-containing protein6.0e-1463.16Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        H+IRSLT E+NK+S GP+G E G +F FPTTGL+KIV FHG+S W+LD+IG   +PI
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

A0A1S3CRJ0 jacalin-related lectin 19-like1.5e-1259.65Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        H+IRSLT E+N++S GP+G E   +F FPTTGL+KIV FHG+S W+LD+IG   +PI
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

A0A5A7TIX2 Jacalin-related lectin 19-like1.7e-1361.4Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        H+IRSLT E+N++S GP+G E G +F FPTTGL+KIV FHG+S W+LD+IG   +PI
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

A0A5A7TJR2 Putative Cysteine/Histidine-rich C1 domain family protein7.3e-1262.3Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNTI
        ++IRSL+LESNK+ +GPFG E G RF FPT+G  KIVSFHG S  YL+SIGI V+P+ N +
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNTI

SwissProt top hitse value%identityAlignment
F4HQX1 Jacalin-related lectin 37.0e-1256.36Show/hide
Query:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        +RSLT ESN+R +GPFG + GT F  P +G  KI+ FHGK+ WYLD+IG+   PI
Subjt:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

O80948 Jacalin-related lectin 231.7e-0545.76Show/hide
Query:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNT
        +I  L  ++NKR   PFG + G +F     G  KIV FHG++S  + SIG+ VVPI NT
Subjt:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNT

P83304 Mannose/glucose-specific lectin (Fragment)2.9e-0543.55Show/hide
Query:  LIRSLTLESNKRSFGPFG-YERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI-HNTI
        +IRSL+  +N  ++GPFG    G  F  P    V +V FHG++ +YLD++GI V P+ H TI
Subjt:  LIRSLTLESNKRSFGPFG-YERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI-HNTI

P93193 Ipomoelin7.5e-0643.14Show/hide
Query:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIG
        ++IRS+   +NK+ +GP+G   GT F        KIV F G S WY+D+IG
Subjt:  HLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIG

Q9SSM3 Jacalin-related lectin 199.5e-0954Show/hide
Query:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIG
        +IRS+T +SNK+ +GP+G E+GT F F   G  +IV  +G+S WYLDSIG
Subjt:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIG

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein5.0e-1356.36Show/hide
Query:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        +RSLT ESN+R +GPFG + GT F  P +G  KI+ FHGK+ WYLD+IG+   PI
Subjt:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

AT1G19715.2 Mannose-binding lectin superfamily protein5.0e-1356.36Show/hide
Query:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        +RSLT ESN+R +GPFG + GT F  P +G  KI+ FHGK+ WYLD+IG+   PI
Subjt:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

AT1G19715.3 Mannose-binding lectin superfamily protein5.0e-1356.36Show/hide
Query:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI
        +RSLT ESN+R +GPFG + GT F  P +G  KI+ FHGK+ WYLD+IG+   PI
Subjt:  IRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPI

AT1G73040.1 Mannose-binding lectin superfamily protein6.7e-1054Show/hide
Query:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIG
        +IRS+T +SNK+ +GP+G E+GT F F   G  +IV  +G+S WYLDSIG
Subjt:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIG

AT2G39330.1 jacalin-related lectin 231.2e-0645.76Show/hide
Query:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNT
        +I  L  ++NKR   PFG + G +F     G  KIV FHG++S  + SIG+ VVPI NT
Subjt:  LIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAAGTGCAGTGATCATGGCCATCTCATTCGATCATTGACTTTGGAAAGTAACAAAAGGAGTTTCGGACCATTTGGTTACGAAAGAGGAACAAGGTTTTGGTTTCC
AACAACCGGCCTTGTAAAGATTGTTAGTTTTCATGGTAAATCCAGTTGGTATCTTGATTCTATCGGGATTAAAGTTGTTCCAATTCACAACACCATAATCTCTAGGGTCA
AATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATAAGTGCAGTGATCATGGCCATCTCATTCGATCATTGACTTTGGAAAGTAACAAAAGGAGTTTCGGACCATTTGGTTACGAAAGAGGAACAAGGTTTTGGTTTCC
AACAACCGGCCTTGTAAAGATTGTTAGTTTTCATGGTAAATCCAGTTGGTATCTTGATTCTATCGGGATTAAAGTTGTTCCAATTCACAACACCATAATCTCTAGGGTCA
AATAA
Protein sequenceShow/hide protein sequence
MHKCSDHGHLIRSLTLESNKRSFGPFGYERGTRFWFPTTGLVKIVSFHGKSSWYLDSIGIKVVPIHNTIISRVK