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Lsi04G016760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G016760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionJacalin-related lectin 3
Genome locationchr04:24186730..24188420
RNA-Seq ExpressionLsi04G016760
SyntenyLsi04G016760
Gene Ontology termsNA
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2998027.1 Hypothetical predicted protein [Olea europaea subsp. europaea]1.8e-1940.97Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  GV W DGV+S+++Q+EI                                   V L+YP+E+L SIHG+       G + ++S+T ESNKR++GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTIIS
         E+GT F FPT+G  KIVGFHG  GWYLD+IG+ + PI+  I S
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTIIS

XP_022862434.1 pentatricopeptide repeat-containing protein At1g19720 [Olea europaea var. sylvestris]1.8e-1940.97Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  GV W DGV+S+++Q+EI                                   V L+YP+E+L SIHG+       G + ++S+T ESNKR++GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTIIS
         E+GT F FPT+G  KIVGFHG  GWYLD+IG+ + PI+  I S
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTIIS

XP_038877874.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120070094 [Benincasa hispida]1.3e-1955Show/hide
Query:  GWADGVFSSIKQVEIVVLEYPNEYLISIHGYINWCTDHGDLIQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI
        GW++    +      V LEYP+EYLISI GYI +   H  +I+S++LESNK+ +GPFG E GT F FPT+G +KIVGFHG+SG YL+SIGI V PI N +
Subjt:  GWADGVFSSIKQVEIVVLEYPNEYLISIHGYINWCTDHGDLIQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI

XP_038898849.1 jacalin-related lectin 3-like isoform X1 [Benincasa hispida]2.2e-3051.32Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI--------------------------------------VVLEYPNEYLISIHGYI--NWCTDHGDLIQSMTLESNKRSF
        GG GG  W DGVFSSIKQV+I                                      VVLEYPNEYL+SIHGY+      D   +I+S+T ESNKRSF
Subjt:  GGPGGVGWADGVFSSIKQVEI--------------------------------------VVLEYPNEYLISIHGYI--NWCTDHGDLIQSMTLESNKRSF

Query:  GPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIY-NTIISCVK
        GPFG   G  FWFPT+GL+K+VGFHGK+GW+LDSIGIKV+P++ NTIIS V+
Subjt:  GPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIY-NTIISCVK

XP_038898850.1 jacalin-related lectin 19-like isoform X2 [Benincasa hispida]3.9e-2766.67Show/hide
Query:  VVLEYPNEYLISIHGYI--NWCTDHGDLIQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIY-NTIISCVK
        VVLEYPNEYL+SIHGY+      D   +I+S+T ESNKRSFGPFG   G  FWFPT+GL+K+VGFHGK+GW+LDSIGIKV+P++ NTIIS V+
Subjt:  VVLEYPNEYLISIHGYI--NWCTDHGDLIQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIY-NTIISCVK

TrEMBL top hitse value%identityAlignment
A0A7J7D390 Uncharacterized protein1.1e-1942.03Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G+ W DGV S+++Q+ I                                   V LEYP E+L SIHGY     + G L ++S+T ESN++++GPFG
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI
         E+GT F FP TG  KIVGFHGKSGWYLD+IG+ + P+
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI

M1AF97 Uncharacterized protein1.1e-1938.73Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G+ W DGV+S+I+Q+EI                                   ++L YP+E+L S+HGY     + G + ++S+T ESNKR++GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI
         E+GT F  P +   KIVGFHGKSGWYLD+IG+ + PI+  +
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI

M1AF98 Uncharacterized protein1.1e-1938.73Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G+ W DGV+S+I+Q+EI                                   ++L YP+E+L S+HGY     + G + ++S+T ESNKR++GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI
         E+GT F  P +   KIVGFHGKSGWYLD+IG+ + PI+  +
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI

M1AF99 Uncharacterized protein1.1e-1938.73Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G+ W DGV+S+I+Q+EI                                   ++L YP+E+L S+HGY     + G + ++S+T ESNKR++GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI
         E+GT F  P +   KIVGFHGKSGWYLD+IG+ + PI+  +
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI

M1AFA0 Uncharacterized protein1.1e-1938.73Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G+ W DGV+S+I+Q+EI                                   ++L YP+E+L S+HGY     + G + ++S+T ESNKR++GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI
         E+GT F  P +   KIVGFHGKSGWYLD+IG+ + PI+  +
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTI

SwissProt top hitse value%identityAlignment
F4HQX1 Jacalin-related lectin 31.0e-1736.23Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G  W DG+++++KQ+ I                                   V  +YP+EYLIS++G        G + ++S+T ESN+R +GPFG
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI
         + GT F  P +G  KI+GFHGK+GWYLD+IG+   PI
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI

O80948 Jacalin-related lectin 235.0e-0930.99Show/hide
Query:  VGGPGGVGWADGVFSSIKQ---------VEIVVLEY--------------------------PNEYLISIHGYINWCTD-HGDLIQSMTLESNKRSFGPF
        +GG GGV W DGV+  +++         V  V  EY                            EYL +I GY +        +I  +  ++NKR   PF
Subjt:  VGGPGGVGWADGVFSSIKQ---------VEIVVLEY--------------------------PNEYLISIHGYINWCTD-HGDLIQSMTLESNKRSFGPF

Query:  GYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNT
        G + G +F     G  KIVGFHG++   + SIG+ V+PI NT
Subjt:  GYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNT

P18674 Agglutinin alpha chain8.5e-0936.84Show/hide
Query:  VVLEYPNEYLISIHGYINWCTDHGDLIQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGI
        + LE+P+EY++ + GY+     +  +I+S+T ++NK+++GP+G   GT F  P    + IVGF G  G++LD   I
Subjt:  VVLEYPNEYLISIHGYINWCTDHGDLIQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGI

P82859 Agglutinin3.8e-0930.15Show/hide
Query:  GGPGGVGWADGVFSSIKQVEIVV-------------------------------------LEYPNEYLISIHGYINWCTDHGDL--IQSMTLESNKRSFG
        GG GG+ W DGVF +I+++ + V                                     LE   E+LI I G+       G    ++S+T  +NK  +G
Subjt:  GGPGGVGWADGVFSSIKQVEIVV-------------------------------------LEYPNEYLISIHGYINWCTDHGDL--IQSMTLESNKRSFG

Query:  PFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGI
        P+G E G  F   +    ++VGFHG+SG YLD+IG+
Subjt:  PFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGI

Q9SSM3 Jacalin-related lectin 192.1e-1534.85Show/hide
Query:  GGPGGVGWADGVFSSIKQVEIVV-----------------------------------LEYPNEYLISIHGYINWCTDHG-DLIQSMTLESNKRSFGPFG
        GG GG  W DG++  ++++ +V                                    L+YP EYL  + GY     + G  +I+SMT +SNK+ +GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEIVV-----------------------------------LEYPNEYLISIHGYINWCTDHG-DLIQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIG
         E+GT F F   G  +IVG +G+SGWYLDSIG
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIG

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein7.1e-1936.23Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G  W DG+++++KQ+ I                                   V  +YP+EYLIS++G        G + ++S+T ESN+R +GPFG
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI
         + GT F  P +G  KI+GFHGK+GWYLD+IG+   PI
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI

AT1G19715.2 Mannose-binding lectin superfamily protein4.6e-1844.66Show/hide
Query:  GGPGGVGWADGVFSSIKQVEIVVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKV
        GG GG           K+ + V  +YP+EYLIS++G        G + ++S+T ESN+R +GPFG + GT F  P +G  KI+GFHGK+GWYLD+IG+  
Subjt:  GGPGGVGWADGVFSSIKQVEIVVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKV

Query:  IPI
         PI
Subjt:  IPI

AT1G19715.3 Mannose-binding lectin superfamily protein7.1e-1936.23Show/hide
Query:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG
        GG  G  W DG+++++KQ+ I                                   V  +YP+EYLIS++G        G + ++S+T ESN+R +GPFG
Subjt:  GGPGGVGWADGVFSSIKQVEI-----------------------------------VVLEYPNEYLISIHGYINWCTDHGDL-IQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI
         + GT F  P +G  KI+GFHGK+GWYLD+IG+   PI
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPI

AT1G73040.1 Mannose-binding lectin superfamily protein1.5e-1634.85Show/hide
Query:  GGPGGVGWADGVFSSIKQVEIVV-----------------------------------LEYPNEYLISIHGYINWCTDHG-DLIQSMTLESNKRSFGPFG
        GG GG  W DG++  ++++ +V                                    L+YP EYL  + GY     + G  +I+SMT +SNK+ +GP+G
Subjt:  GGPGGVGWADGVFSSIKQVEIVV-----------------------------------LEYPNEYLISIHGYINWCTDHG-DLIQSMTLESNKRSFGPFG

Query:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIG
         E+GT F F   G  +IVG +G+SGWYLDSIG
Subjt:  YERGTRFWFPTTGLIKIVGFHGKSGWYLDSIG

AT2G39330.1 jacalin-related lectin 233.5e-1030.99Show/hide
Query:  VGGPGGVGWADGVFSSIKQ---------VEIVVLEY--------------------------PNEYLISIHGYINWCTD-HGDLIQSMTLESNKRSFGPF
        +GG GGV W DGV+  +++         V  V  EY                            EYL +I GY +        +I  +  ++NKR   PF
Subjt:  VGGPGGVGWADGVFSSIKQ---------VEIVVLEY--------------------------PNEYLISIHGYINWCTD-HGDLIQSMTLESNKRSFGPF

Query:  GYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNT
        G + G +F     G  KIVGFHG++   + SIG+ V+PI NT
Subjt:  GYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGCGGCCCTGGTGGGGTCGGATGGGCCGACGGAGTTTTCTCATCCATAAAACAAGTGGAGATTGTTGTTCTTGAATATCCAAACGAATACCTTATTTCAATTCA
TGGATACATTAATTGGTGCACGGATCATGGCGATCTCATTCAATCAATGACTTTGGAAAGTAACAAAAGAAGTTTCGGACCATTTGGTTACGAAAGAGGAACAAGGTTTT
GGTTTCCAACAACCGGCCTTATAAAGATTGTTGGTTTTCATGGTAAGTCTGGTTGGTATCTCGATTCTATCGGGATTAAAGTTATTCCAATTTACAACACCATAATCTCT
TGTGTCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGCGGCCCTGGTGGGGTCGGATGGGCCGACGGAGTTTTCTCATCCATAAAACAAGTGGAGATTGTTGTTCTTGAATATCCAAACGAATACCTTATTTCAATTCA
TGGATACATTAATTGGTGCACGGATCATGGCGATCTCATTCAATCAATGACTTTGGAAAGTAACAAAAGAAGTTTCGGACCATTTGGTTACGAAAGAGGAACAAGGTTTT
GGTTTCCAACAACCGGCCTTATAAAGATTGTTGGTTTTCATGGTAAGTCTGGTTGGTATCTCGATTCTATCGGGATTAAAGTTATTCCAATTTACAACACCATAATCTCT
TGTGTCAAATAA
Protein sequenceShow/hide protein sequence
MVGGPGGVGWADGVFSSIKQVEIVVLEYPNEYLISIHGYINWCTDHGDLIQSMTLESNKRSFGPFGYERGTRFWFPTTGLIKIVGFHGKSGWYLDSIGIKVIPIYNTIIS
CVK