; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G016870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G016870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:24261717..24263009
RNA-Seq ExpressionLsi04G016870
SyntenyLsi04G016870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147861.1 uncharacterized protein LOC101222738 [Cucumis sativus]4.3e-6388.28Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSP+E+ EEK+    G NNLQRSAS+PPFN RKGL  NM+SETNLEKP+KN
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN

Query:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
         WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]3.0e-6488.97Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSP+E+ EEK+ E  G NNLQRSAS+PPFN RKGLL N++SETNLEKP+KN
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN

Query:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
         WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]4.0e-6184.25Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSP++S EE KK+E+GG NNLQRS+SVPPFN RKG L+MESE +L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]1.4e-6184.93Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSP++S EE KK+E+GG NNLQRS+SVPPFN RKGLL+MESE +L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]1.4e-6691.67Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLEKPKKNA
        MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSP+E+SEEKKME GG  NLQRSAS+PPF   KGLL MESE NLEKPKKNA
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLG GGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein2.1e-6388.28Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSP+E+ EEK+    G NNLQRSAS+PPFN RKGL  NM+SETNLEKP+KN
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN

Query:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
         WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A1S3CST6 uncharacterized protein LOC1035039301.4e-6488.97Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSP+E+ EEK+ E  G NNLQRSAS+PPFN RKGLL N++SETNLEKP+KN
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN

Query:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
         WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A1.4e-6488.97Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSP+E+ EEK+ E  G NNLQRSAS+PPFN RKGLL N++SETNLEKP+KN
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLL-NMESETNLEKPKKN

Query:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
         WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  AWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1FHE8 uncharacterized protein LOC1114457952.0e-6184.25Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSP++S EE KK+E+GG NNLQRS+SVPPFN RKG L+MESE +L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1J1T2 uncharacterized protein LOC1114810656.7e-6284.93Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSP++S EE KK+E+GG NNLQRS+SVPPFN RKGLL+MESE +L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEE-KKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein1.1e-1943.38Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAI--LSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLEKPK
        MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+   EEH++A   L   E ++ +  E    ++L  + S                      K
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAI--LSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLEKPK

Query:  KNAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA
         + WWR++ WAFLNEP E EG  N+YVSQF VA++A
Subjt:  KNAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAGAAGTGAGTCACCGGAGGAACAAGTCATTGACAAAAGAAGAAATTGAAGCGTTTTGGAAAAC
GAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGTCCATATGAGAGCTCTGAGGAAAAGAAAATGGAATATGGTGGAAATAATAATCTTCAGAGATCAGCCT
CTGTGCCTCCATTCAATGCAAGGAAGGGTTTATTGAACATGGAATCTGAAACTAACTTAGAAAAGCCCAAGAAAAATGCCTGGTGGAGAAGAAGCAACTGGGCGTTTCTA
AACGAACCACCGGAGACAGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGCGGTGGCGTCAGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
AAGATCGGAACCAAGAGATAAAGACACACTGCTCGCCAGACGCCAACTTTATTTATATATATTGTTTGCTCTTCGTACCAAGAAACCATACATATTATCATACATCTAAT
TTATCAGCATTAATTAATATTTTGAAGAGATGGGTTCTTTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAGAAGTGAGTCACCGGAGGAACAAGTCATTGACA
AAAGAAGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGTCCATATGAGAGCTCTGAGGAAAAGAAAATGGAATATGG
TGGAAATAATAATCTTCAGAGATCAGCCTCTGTGCCTCCATTCAATGCAAGGAAGGGTTTATTGAACATGGAATCTGAAACTAACTTAGAAAAGCCCAAGAAAAATGCCT
GGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTT
GGTCGCGGTGGCGTCAGTGCTTGAGAAAGGCTTAATTTTATCCTTGTTGCGTCGGTGACGGTGTGGGTGTGATCCGATGTCGTGAAGAAAAAAGAAAAAGAAAAAAAAAA
AAGGTTGTAAATGAATTTAGTTGGTATTAGAATTCTCTTCTGAATTTCAGTGGGTAGTTTGTAACTTAATATGGGGATTTTCTTTTTCCTTCTTTTGAATTCAATTTAAG
AGTCAATTTGGTTGGATTGGACTGGAAGGCCTGTGTAAAAATGTTAGATATTTTATTTTCATATGAGATCAGTTATGCTTTATTTTTATTATTATTTTTCATTATTTTAT
TTGAGTTGTTAGGAGAATATATTGAAGAAACATATTTGTGAGGAAGAAAAATTTAGATGCTGAATTACACTATTTTCGTACAACATACGGTTATCCAATAGATCAATTTA
TGCGTAATTAGATTAATTT
Protein sequenceShow/hide protein sequence
MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLEKPKKNAWWRRSNWAFL
NEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA