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Lsi04G017060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionThioredoxin
Genome locationchr04:24424625..24425783
RNA-Seq ExpressionLsi04G017060
SyntenyLsi04G017060
Gene Ontology termsGO:0006662 - glycerol ether metabolic process (biological process)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591291.1 hypothetical protein SDJN03_13637, partial [Cucurbita argyrosperma subsp. sororia]9.0e-5190.99Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +E S VITCHTVGSW QQLLKGKQS+KLIVVDFTAAWCGPCRAIAPVF ELAKKMSNVIFLKVDVDKL TVAAEWGVSALPCFMFLKNGKVV RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D LQK+VLQHA
Subjt:  DELQKLVLQHA

XP_004147847.1 thioredoxin H-type [Cucumis sativus]2.9e-4988.29Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +EKS+VI CHTV SW QQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGK+V+RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D L+KLV  HA
Subjt:  DELQKLVLQHA

XP_008466520.1 PREDICTED: thioredoxin H-type-like [Cucumis melo]5.3e-5190.99Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +EKS+VITCHTV SW QQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNG VV+RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D L+KLVL HA
Subjt:  DELQKLVLQHA

XP_022975984.1 thioredoxin H-type-like [Cucurbita maxima]7.6e-5089.19Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +E S VITCHTVGSW QQLLKGKQS+KLIVVDFTAAWCGPCRAIAP F ELAKKMSNVIFLKVDVDKL TVAAEWGV ALPCFMFLKNGKVV RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D LQK+VLQHA
Subjt:  DELQKLVLQHA

XP_038898480.1 thioredoxin H1-like [Benincasa hispida]2.1e-5293.64Show/hide
Query:  EKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKD
        +KSEVITCHTVGSW QQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVF ELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVV RFVGARKD
Subjt:  EKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKD

Query:  ELQKLVLQHA
         L+KLVLQHA
Subjt:  ELQKLVLQHA

TrEMBL top hitse value%identityAlignment
A0A0A0LGF7 Thioredoxin1.4e-4988.29Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +EKS+VI CHTV SW QQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGK+V+RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D L+KLV  HA
Subjt:  DELQKLVLQHA

A0A1S3CSR4 Thioredoxin2.5e-5190.99Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +EKS+VITCHTV SW QQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNG VV+RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D L+KLVL HA
Subjt:  DELQKLVLQHA

A0A5A7V9W3 Thioredoxin2.5e-5190.99Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +EKS+VITCHTV SW QQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNG VV+RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D L+KLVL HA
Subjt:  DELQKLVLQHA

A0A6J1IM69 thioredoxin H-type-like3.7e-5089.19Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +E S VITCHTVGSW QQLLKGKQS+KLIVVDFTAAWCGPCRAIAP F ELAKKMSNVIFLKVDVDKL TVAAEWGV ALPCFMFLKNGKVV RFVGARK
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        D LQK+VLQHA
Subjt:  DELQKLVLQHA

A0A6J1IZB4 thioredoxin H1-like2.4e-4988.07Show/hide
Query:  KSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKDE
        K EVI CHTVGSW QQLLKGKQS+KLIVVDFTAAWCGPCRA+APVF ELAKK+SNVIFLKVDVD+L  VAAEWGVSALPCFMFLKNGKVV+RFVGARKD+
Subjt:  KSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKDE

Query:  LQKLVLQHA
        LQK+VLQHA
Subjt:  LQKLVLQHA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H14.5e-3759.09Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        SE+ +VI CHTV +WN+QL K  +S  L+VVDFTA+WCGPCR IAP F +LAKK+ NV+FLKVD D+L +VA++W + A+P FMFLK GK++++ VGA+K
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQH
        DELQ  + +H
Subjt:  DELQKLVLQH

P29449 Thioredoxin H-type 15.0e-3658.56Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        SE+ +V  CH V  WN+   KG ++ KL+VVDFTA+WCGPCR IAP+  ++AKKM +VIFLKVDVD+L TV+AEW V A+P F+F+K+GK V+R VGA+K
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQHA
        +ELQ+ +++HA
Subjt:  DELQKLVLQHA

Q07090 Thioredoxin H-type 22.7e-3459.09Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +E+ +VI  HTV +WN+ L KG    KLIVVDFTA+WCGPC+ IA  + ELAKKM  V FLKVDVD+L +VA +W V A+P FMFLK GK+V++ VGA+K
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQH
        DELQ+ + +H
Subjt:  DELQKLVLQH

Q39239 Thioredoxin H41.7e-3156.76Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGAR
        +E+ +VI CHT   W  QL K K+S+KLIV+DFTA+WC PCR IAP+F +LAKK MS+ IF KVDVD+L +VA E+GV A+P F+F+K G+VV++ VGA 
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGAR

Query:  KDELQKLVLQH
        K++LQ  +++H
Subjt:  KDELQKLVLQH

Q43636 Thioredoxin H-type1.0e-3661.82Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        +E+ +VI CHTV +WN+QL KG  +  LIVVDFTA+WCGPCR IAP   ELAKK+ NV FLKVDVD+L TVA EW V ++P FMFLK GK++++ VGA+K
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQH
        DELQ+ + +H
Subjt:  DELQKLVLQH

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein1.2e-3256.76Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGAR
        +E+ +VI CHT   W  QL K K+S+KLIV+DFTA+WC PCR IAP+F +LAKK MS+ IF KVDVD+L +VA E+GV A+P F+F+K G+VV++ VGA 
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGAR

Query:  KDELQKLVLQH
        K++LQ  +++H
Subjt:  KDELQKLVLQH

AT1G45145.1 thioredoxin H-type 51.2e-3252.78Show/hide
Query:  KSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKDE
        + EVI CHT+  WN+++    +S KLIV+DFTA+WC PCR IAPVF E+AKK +NV+F K+DVD+L  VA E+ V A+P F+F+K G +++R VGA KDE
Subjt:  KSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKDE

Query:  LQKLVLQH
        + + +++H
Subjt:  LQKLVLQH

AT3G51030.1 thioredoxin H-type 13.2e-3859.09Show/hide
Query:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK
        SE+ +VI CHTV +WN+QL K  +S  L+VVDFTA+WCGPCR IAP F +LAKK+ NV+FLKVD D+L +VA++W + A+P FMFLK GK++++ VGA+K
Subjt:  SEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARK

Query:  DELQKLVLQH
        DELQ  + +H
Subjt:  DELQKLVLQH

AT5G39950.1 thioredoxin 29.0e-2545.87Show/hide
Query:  SHSEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGA
        + SE S V+   +   W     + K+S+KL+VVDF+A+WCGPCR I P    +A K ++V F+K+DVD+L  VA E+ V+A+P F+ +K GK + R +GA
Subjt:  SHSEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGA

Query:  RKDELQKLV
        +KDEL+K V
Subjt:  RKDELQKLV

AT5G42980.1 thioredoxin 32.7e-2955.45Show/hide
Query:  KSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKDE
        + EVI CHTV  W ++L    +S KLIV+DFTA WC PCR IAPVF +LAKK  +V+F KVDVD+L TVA E+ V A+P F+F+K G++    VGA K+E
Subjt:  KSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVNRFVGARKDE

Query:  L
        +
Subjt:  L


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGTGGGAGCTCTCGAAGCTTTCCGAATGGTTCGATTTCATATGCACCGCAAATGGGGCTTTCCAATTGCTTCTTCATTTCCTTATTGTCTTCTACTACTTCTA
CTATAAATGGAGCCATTCAGAAAAGAGCGAAGTGATTACGTGCCATACCGTTGGATCATGGAACCAGCAGCTCCTCAAAGGAAAACAATCCGATAAACTGATTGTTGTGG
ACTTCACTGCCGCATGGTGCGGTCCGTGCCGTGCCATCGCTCCAGTTTTTGTAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAGGTCGATGTTGATAAATTG
ACTACTGTTGCTGCGGAATGGGGAGTGAGTGCACTCCCTTGTTTCATGTTCTTGAAGAATGGGAAGGTGGTGAACAGGTTTGTAGGAGCAAGAAAAGATGAATTGCAGAA
GCTTGTATTACAACATGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATTTAGCCAAGATGGAAATGCTTACCTAGTTGCGTACCGCGTAGTGTAAACCGCATAATCTGATGCTGTTCTCTTTTCGCTTACCTTAGTTGTATTTGGTCTGTCCTAAC
GCACTTCCATCGTCAACCCTTTGCAGAAAAATTGTTCAGATTCTTGAAGATGACAAAGTGGGAGCTCTCGAAGCTTTCCGAATGGTTCGATTTCATATGCACCGCAAATG
GGGCTTTCCAATTGCTTCTTCATTTCCTTATTGTCTTCTACTACTTCTACTATAAATGGAGCCATTCAGAAAAGAGCGAAGTGATTACGTGCCATACCGTTGGATCATGG
AACCAGCAGCTCCTCAAAGGAAAACAATCCGATAAACTGATTGTTGTGGACTTCACTGCCGCATGGTGCGGTCCGTGCCGTGCCATCGCTCCAGTTTTTGTAGAGTTGGC
TAAGAAGATGAGTAATGTCATATTCTTGAAGGTCGATGTTGATAAATTGACTACTGTTGCTGCGGAATGGGGAGTGAGTGCACTCCCTTGTTTCATGTTCTTGAAGAATG
GGAAGGTGGTGAACAGGTTTGTAGGAGCAAGAAAAGATGAATTGCAGAAGCTTGTATTACAACATGCCTAATTTAAGGAGATACTAATACCATCATCTGTTTTTTTGGAT
TTCTATTAGAACTAGAAAAAGGTTTATGCAACTTTTGTGAGTTGCTATAAATTGATGCTTTTAGTTAGAACAACTTTGATTTTGCTTGTTTTGGATTGTTTTTTAATCAT
TTTTACTATTTCGAGGCTATCAGACTTGTTATGTAATGAATGAGCATCTATTCTTTTGTTGAATAAAGATGAGCACCTATTCAAAGTT
Protein sequenceShow/hide protein sequence
MTKWELSKLSEWFDFICTANGAFQLLLHFLIVFYYFYYKWSHSEKSEVITCHTVGSWNQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKL
TTVAAEWGVSALPCFMFLKNGKVVNRFVGARKDELQKLVLQHA