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Lsi04G017140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-type anion channel SLAH4-like
Genome locationchr04:24497221..24498663
RNA-Seq ExpressionLsi04G017140
SyntenyLsi04G017140
Gene Ontology termsGO:0006873 - cellular ion homeostasis (biological process)
GO:0015698 - inorganic anion transport (biological process)
GO:0034220 - ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008308 - voltage-gated anion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063257.1 S-type anion channel SLAH4-like [Cucumis melo var. makuwa]1.7e-1977.78Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MA+S SE TILQMESPGN +  Y+ENG VSSP     G+LS VETMLVKFHAGYFRIGMSVGCQTLLWKIMA
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

TYK31517.1 S-type anion channel SLAH4-like [Cucumis melo var. makuwa]1.7e-1977.78Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MA+S SE TILQMESPGN +  Y+ENG VSSP     G+LS VETMLVKFHAGYFRIGMSVGCQTLLWKIMA
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

XP_004147871.1 S-type anion channel SLAH4 [Cucumis sativus]2.9e-1977.46Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP--AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MASSASE TILQMESPGN + GY+EN   SSP    G+ S VETMLVKFHAGYFRIGMSVGCQTLLWKI+A
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP--AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

XP_008466511.1 PREDICTED: S-type anion channel SLAH4-like [Cucumis melo]1.7e-1977.78Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MA+S SE TILQMESPGN +  Y+ENG VSSP     G+LS VETMLVKFHAGYFRIGMSVGCQTLLWKIMA
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

XP_038896582.1 S-type anion channel SLAH4-like [Benincasa hispida]3.4e-2078.79Show/hide
Query:  ASETTILQMESPGNVTDGYQENGDVSSPAVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMAG
        ASE TILQMESPGN + GYQ++G VSSP  G+ SG ETML+KFHAGYFRIGMSVGCQTLLWKI+AG
Subjt:  ASETTILQMESPGNVTDGYQENGDVSSPAVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMAG

TrEMBL top hitse value%identityAlignment
A0A0A0LJ39 Uncharacterized protein1.4e-1977.46Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP--AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MASSASE TILQMESPGN + GY+EN   SSP    G+ S VETMLVKFHAGYFRIGMSVGCQTLLWKI+A
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP--AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

A0A151RQQ8 Uncharacterized protein2.4e-1936.26Show/hide
Query:  MASSASETTI-LQMESPGNVTDGYQENGDVSSPAVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA-----------------------------G
        MAS  SE+ I L +++  +           S  A   +  + ++L KFHAGYFRI +S G Q LLWK +                              G
Subjt:  MASSASETTI-LQMESPGNVTDGYQENGDVSSPAVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA-----------------------------G

Query:  IVVGICDTSSGTGRENIWPMVHKRKEIFVQCCESDEPTVGDRKLGGGSGGGPDGVEGERIVLVFAGDRSLFSAVCDALSTVL
         VVG+C    G GRE++  +VH+ +E+ ++C E  EP VGDR+LGGG+     G+EGE   +VFAGD +L   VCDALS  +
Subjt:  IVVGICDTSSGTGRENIWPMVHKRKEIFVQCCESDEPTVGDRKLGGGSGGGPDGVEGERIVLVFAGDRSLFSAVCDALSTVL

A0A1S3CRG8 S-type anion channel SLAH4-like8.2e-2077.78Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MA+S SE TILQMESPGN +  Y+ENG VSSP     G+LS VETMLVKFHAGYFRIGMSVGCQTLLWKIMA
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

A0A5A7V8D0 S-type anion channel SLAH4-like8.2e-2077.78Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MA+S SE TILQMESPGN +  Y+ENG VSSP     G+LS VETMLVKFHAGYFRIGMSVGCQTLLWKIMA
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

A0A5D3E5V8 S-type anion channel SLAH4-like8.2e-2077.78Show/hide
Query:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA
        MA+S SE TILQMESPGN +  Y+ENG VSSP     G+LS VETMLVKFHAGYFRIGMSVGCQTLLWKIMA
Subjt:  MASSASETTILQMESPGNVTDGYQENGDVSSP---AVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCTGCCTCCGAAACTACCATCCTCCAAATGGAGTCACCGGGTAACGTAACCGACGGTTACCAAGAAAACGGCGACGTTTCAAGTCCGGCGGTTGGGATGTT
ATCGGGGGTGGAGACGATGCTGGTGAAATTTCATGCAGGGTATTTCCGGATAGGAATGTCGGTGGGATGTCAAACGTTACTATGGAAAATCATGGCCGGTATTGTGGTGG
GTATTTGCGATACCAGTAGTGGTACTGGACGTGAAAATATATGGCCAATGGTTCACAAAAGGAAGGAGATTTTTGTGCAGTGTTGCGAATCCGACGAGCCAACTGTCGGT
GATCGGAAACTTGGTGGGGGCTCAGGCGGCGGGCCGGATGGGGTGGAAGGAGAGCGCATTGTGCTTGTTTTCGCTGGGGATCGTTCATTATTTAGTGCTGTTTGTGACGC
TTTATCAACGGTTCTCCGGCGTGGATCGGCTGCCGTCCATGCTCCGACCGGTGTTCTTTCTTTACATAGCAGCCCCAAGCTTCGCGAGCTTGGCTTGGGAATCCATAACT
GGGGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCATCTGCCTCCGAAACTACCATCCTCCAAATGGAGTCACCGGGTAACGTAACCGACGGTTACCAAGAAAACGGCGACGTTTCAAGTCCGGCGGTTGGGATGTT
ATCGGGGGTGGAGACGATGCTGGTGAAATTTCATGCAGGGTATTTCCGGATAGGAATGTCGGTGGGATGTCAAACGTTACTATGGAAAATCATGGCCGGTATTGTGGTGG
GTATTTGCGATACCAGTAGTGGTACTGGACGTGAAAATATATGGCCAATGGTTCACAAAAGGAAGGAGATTTTTGTGCAGTGTTGCGAATCCGACGAGCCAACTGTCGGT
GATCGGAAACTTGGTGGGGGCTCAGGCGGCGGGCCGGATGGGGTGGAAGGAGAGCGCATTGTGCTTGTTTTCGCTGGGGATCGTTCATTATTTAGTGCTGTTTGTGACGC
TTTATCAACGGTTCTCCGGCGTGGATCGGCTGCCGTCCATGCTCCGACCGGTGTTCTTTCTTTACATAGCAGCCCCAAGCTTCGCGAGCTTGGCTTGGGAATCCATAACT
GGGGCCTTTGA
Protein sequenceShow/hide protein sequence
MASSASETTILQMESPGNVTDGYQENGDVSSPAVGMLSGVETMLVKFHAGYFRIGMSVGCQTLLWKIMAGIVVGICDTSSGTGRENIWPMVHKRKEIFVQCCESDEPTVG
DRKLGGGSGGGPDGVEGERIVLVFAGDRSLFSAVCDALSTVLRRGSAAVHAPTGVLSLHSSPKLRELGLGIHNWGL