; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G017450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGibberellin-regulated family protein
Genome locationchr04:24750180..24751157
RNA-Seq ExpressionLsi04G017450
SyntenyLsi04G017450
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136382.1 gibberellin-regulated protein 11 [Cucumis sativus]1.5e-3468.47Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MA+PK  II+CL  SSL VLCF + D+ +        +    ++P K QNIDCGGACASRCKLSSRPNLC RACGTCCARCSCVPPGTSG YE CPCYA 
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

XP_008466478.1 PREDICTED: gibberellin-regulated protein 11-like [Cucumis melo]7.2e-3470.27Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAIPK  II CL   SL VLCF + D+MV          GV  +P   QNI+CGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSG Y  CPCYA 
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]9.4e-3469.72Show/hide
Query:  IPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMT
        + KAL+   L   SL V+     DE      +VNSI GV  +P  IQ+IDCGGACASRCKLSSRPNLCKRACGTCCARC+CVPPGTSGGYETCPCYA++T
Subjt:  IPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMT

Query:  THGGRRKCP
        THGGRRKCP
Subjt:  THGGRRKCP

XP_038899682.1 gibberellin-regulated protein 1-like isoform X1 [Benincasa hispida]1.8e-3774.77Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        M I K LII  L ISS  V    + ++M      VNSIDGV TN  KIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGY+ CPCYA+
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        MTTHGGRRKCP
Subjt:  MTTHGGRRKCP

XP_038899683.1 gibberellin-regulated protein 11-like isoform X2 [Benincasa hispida]1.7e-3592.21Show/hide
Query:  VNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP
        VNSIDGV TN  KIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGY+ CPCYA+MTTHGGRRKCP
Subjt:  VNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LDK8 Uncharacterized protein7.0e-3568.47Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MA+PK  II+CL  SSL VLCF + D+ +        +    ++P K QNIDCGGACASRCKLSSRPNLC RACGTCCARCSCVPPGTSG YE CPCYA 
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

A0A1S3CSM7 gibberellin-regulated protein 11-like3.5e-3470.27Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAIPK  II CL   SL VLCF + D+MV          GV  +P   QNI+CGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSG Y  CPCYA 
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

A0A5D3E7E4 Gibberellin-regulated protein 11-like3.5e-3470.27Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAIPK  II CL   SL VLCF + D+MV          GV  +P   QNI+CGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSG Y  CPCYA 
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

A0A6J1FJ01 gibberellin-regulated protein 1-like4.6e-3469.72Show/hide
Query:  IPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMT
        + KAL+   L   SL V+     DE      +VNSI GV  +P  IQ+IDCGGACASRCKLSSRPNLCKRACGTCCARC+CVPPGTSGGYETCPCYA++T
Subjt:  IPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMT

Query:  THGGRRKCP
        THGGRRKCP
Subjt:  THGGRRKCP

A0A6J1J2A8 gibberellin-regulated protein 1-like3.0e-3368.81Show/hide
Query:  IPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMT
        + KAL+   L   SL V+     DE      +VNSI GV  +P  +Q+IDCGGACASRCKLSSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA+MT
Subjt:  IPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMT

Query:  THGGRRKCP
        THGGRRKCP
Subjt:  THGGRRKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 113.2e-2468.49Show/hide
Query:  DGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP
        D VT+N      IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY ++TTHGGRRKCP
Subjt:  DGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP

P46687 Gibberellin-regulated protein 37.3e-2165.62Show/hide
Query:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP
        +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA++TT GGR KCP
Subjt:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP

P46688 Gibberellin-regulated protein 29.5e-2145.95Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MA+ ++ ++L      L ++C      +  +E  V++ DG       +  IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA+
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGR KCP
Subjt:  MTTHGGRRKCP

P46689 Gibberellin-regulated protein 16.0e-2352.25Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAI KALI   L   SL VL   + D           ++         + IDCG AC +RC+LS RP LC RACGTCC RC+CVPPGT G Y+ C CYA+
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

Q93X17 Snakin-21.5e-2655.36Show/hide
Query:  MAIPKALII-LCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYA
        MAI KAL   L LS+  L  +   +TD++        + + ++      + IDCGGACA+RC+LSSRP LC RACGTCCARC+CVPPGTSG  ETCPCYA
Subjt:  MAIPKALII-LCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYA

Query:  NMTTHGGRRKCP
        ++TTHG +RKCP
Subjt:  NMTTHGGRRKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 14.2e-2452.25Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAI KALI   L   SL VL   + D           ++         + IDCG AC +RC+LS RP LC RACGTCC RC+CVPPGT G Y+ C CYA+
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

AT1G75750.2 GAST1 protein homolog 13.2e-2454.05Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAI KALI   L   SL VL   + DE           +G        + IDCG AC +RC+LS RP LC RACGTCC RC+CVPPGT G Y+ C CYA+
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGRRKCP
Subjt:  MTTHGGRRKCP

AT2G18420.1 Gibberellin-regulated family protein2.2e-2568.49Show/hide
Query:  DGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP
        D VT+N      IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY ++TTHGGRRKCP
Subjt:  DGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP

AT4G09600.1 GAST1 protein homolog 35.2e-2265.62Show/hide
Query:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP
        +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA++TT GGR KCP
Subjt:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKCP

AT4G09610.1 GAST1 protein homolog 26.8e-2245.95Show/hide
Query:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MA+ ++ ++L      L ++C      +  +E  V++ DG       +  IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA+
Subjt:  MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRKCP
        +TTHGGR KCP
Subjt:  MTTHGGRRKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCCTAAAGCTCTAATTATCCTTTGTCTTTCCATCTCGTCTCTTTTCGTTCTTTGTTTCGCTAAAACTGATGAAATGGTTCGATTTGAATTTCAGGTGAACTC
AATAGATGGTGTTACGACTAATCCCGTTAAGATTCAGAATATTGATTGTGGAGGAGCTTGTGCGTCGAGGTGCAAATTATCATCAAGGCCAAACTTGTGCAAGAGGGCAT
GCGGCACGTGCTGTGCACGTTGCAGTTGCGTGCCGCCGGGAACTTCCGGCGGCTACGAAACTTGTCCTTGCTATGCCAACATGACCACTCACGGTGGCCGGAGAAAGTGT
CCCTAA
mRNA sequenceShow/hide mRNA sequence
TTCTATTTACTATAAATATGGACATTTCGTTTCTCTTTTATATTCATTCTACGTCTTCAAACACTCTTGAGTTCTAATTTCTCTCTTCATCCTCTTTAATTCCCATGGCC
ATTCCTAAAGCTCTAATTATCCTTTGTCTTTCCATCTCGTCTCTTTTCGTTCTTTGTTTCGCTAAAACTGATGAAATGGTTCGATTTGAATTTCAGGTGAACTCAATAGA
TGGTGTTACGACTAATCCCGTTAAGATTCAGAATATTGATTGTGGAGGAGCTTGTGCGTCGAGGTGCAAATTATCATCAAGGCCAAACTTGTGCAAGAGGGCATGCGGCA
CGTGCTGTGCACGTTGCAGTTGCGTGCCGCCGGGAACTTCCGGCGGCTACGAAACTTGTCCTTGCTATGCCAACATGACCACTCACGGTGGCCGGAGAAAGTGTCCCTAA
TTAAATTATTCAAAAAAAGCTACTGTGATGAAAAAATTGTCATAATTTCTGCATGCAAAGTCTCTGTTCTGTTCTGCTCTGCTCTGCTCTGCTCAATGTCATCTTCAAGC
GTTTCAGCTTTGATTAGTAATTAAGATTTTCAAGAGTGTTTGAAATAAGAAATTAATGTAAAATAACAGATATATCTGGAGGTAAAAATACCATATTTTTCTCTGTCTCT
TGTTTGTTTGTTCTTCCTTATTATGTGAGTGAATGTAACAGATATGAATTATATTCTTGTACGTTAGAAGTGGTTCGATCAGTTTTCCATTCTGTGTGTAATAAAGTAAC
AATTAATGGATCAAAACCTTTTTGAAACTCTCTA
Protein sequenceShow/hide protein sequence
MAIPKALIILCLSISSLFVLCFAKTDEMVRFEFQVNSIDGVTTNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKC
P