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Lsi04G017580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:24824478..24825238
RNA-Seq ExpressionLsi04G017580
SyntenyLsi04G017580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A446YYI0 Uncharacterized protein4.9e-0431.72Show/hide
Query:  IRNLARQRGAPNDRMRDLAANIVKADVNPQRLVQFKYFHRQF-----PVELV--IETTCKFSKFLIAAGISPVILLLLSCRVPRNFPDICDGRAPENS--
        +R L     A +D  R  +  I      P  L + ++  R       P +L+   E+ C   +  +AAGI P I L  S  +P   P I  G  P +   
Subjt:  IRNLARQRGAPNDRMRDLAANIVKADVNPQRLVQFKYFHRQF-----PVELV--IETTCKFSKFLIAAGISPVILLLLSCRVPRNFPDICDGRAPENS--

Query:  ------NAGKLKNPAGTVPLKKLPAILIFVSESHRPSFSGMGPKK
                G+ K+PAGT PL+K        S  H PS SGMGPKK
Subjt:  ------NAGKLKNPAGTVPLKKLPAILIFVSESHRPSFSGMGPKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGAAGTTGTAAGGCTCATCATCGACCGAATCTCATTCGGAATTTGGCCCGTCAAAGAGGTGCACCGAACGACCGAATGCGGGATCTCGCCGCCAATATTGTTAA
AGCTGACGTTAATCCTCAGCGACTTGTTCAATTCAAATATTTCCACAGGCAATTTCCCGTTGAATTGGTTATAGAAACAACCTGCAAGTTTTCTAAGTTCTTAATCGCCG
CCGGAATTTCCCCTGTAATATTGTTGTTATTAAGCTGTAGAGTTCCAAGAAACTTCCCTGACATTTGCGACGGAAGAGCGCCGGAAAACTCCAACGCCGGAAAGTTGAAG
AACCCCGCCGGAACCGTTCCATTAAAGAAATTACCCGCAATTCTTATTTTCGTAAGCGAATCACACCGGCCTAGTTTCTCGGGGATGGGTCCAAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCGAAGTTGTAAGGCTCATCATCGACCGAATCTCATTCGGAATTTGGCCCGTCAAAGAGGTGCACCGAACGACCGAATGCGGGATCTCGCCGCCAATATTGTTAA
AGCTGACGTTAATCCTCAGCGACTTGTTCAATTCAAATATTTCCACAGGCAATTTCCCGTTGAATTGGTTATAGAAACAACCTGCAAGTTTTCTAAGTTCTTAATCGCCG
CCGGAATTTCCCCTGTAATATTGTTGTTATTAAGCTGTAGAGTTCCAAGAAACTTCCCTGACATTTGCGACGGAAGAGCGCCGGAAAACTCCAACGCCGGAAAGTTGAAG
AACCCCGCCGGAACCGTTCCATTAAAGAAATTACCCGCAATTCTTATTTTCGTAAGCGAATCACACCGGCCTAGTTTCTCGGGGATGGGTCCAAAAAAGTAA
Protein sequenceShow/hide protein sequence
MQRSCKAHHRPNLIRNLARQRGAPNDRMRDLAANIVKADVNPQRLVQFKYFHRQFPVELVIETTCKFSKFLIAAGISPVILLLLSCRVPRNFPDICDGRAPENSNAGKLK
NPAGTVPLKKLPAILIFVSESHRPSFSGMGPKK