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Lsi04G017650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein kinase superfamily protein
Genome locationchr04:24884883..24888080
RNA-Seq ExpressionLsi04G017650
SyntenyLsi04G017650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8086787.1 hypothetical protein EE612_010319 [Oryza sativa]1.4e-1337.95Show/hide
Query:  KSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTT--------------YGAPRDNDNISTPSAMASSNAF-MIDDPR-QPSATQTLYMAILEPGEPPLAY
        K  SMV AATV+ HG    T  +VGPSFP   TT               G P D+DN STPS MASS A      P+  P+  QTLY A    G PP A 
Subjt:  KSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTT--------------YGAPRDNDNISTPSAMASSNAF-MIDDPR-QPSATQTLYMAILEPGEPPLAY

Query:  DA---------LATALPAAVDATWVPCPAPSRG--------------EWYRIPSLSELSYNTV--------PFHLDGIGLIPLSLKLSDSGQIPI
         A           T  PA V+A  VP P  S G              E++R P +  L +  +        PFH  G G  P SLKL DSG IP+
Subjt:  DA---------LATALPAAVDATWVPCPAPSRG--------------EWYRIPSLSELSYNTV--------PFHLDGIGLIPLSLKLSDSGQIPI

KAF4363588.1 hypothetical protein F8388_002129 [Cannabis sativa]2.1e-0429.28Show/hide
Query:  DSKSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD---ALATALPAAV
        +S  L+ V A+ + I  AS TT P    +F         PR N   S P          + +   P         +  P   PLAY    A  T  PAAV
Subjt:  DSKSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD---ALATALPAAV

Query:  DATWVPCPAPSRGEWYRIPSLSELSYNTV----------------------------PFHLDGIGLIPLSLKLSDSGQIPI
         A WVPCP+ SRG+   +P  ++L  + +                            P H DGI  IP+S KL DSG  P+
Subjt:  DATWVPCPAPSRGEWYRIPSLSELSYNTV----------------------------PFHLDGIGLIPLSLKLSDSGQIPI

KAG5613519.1 hypothetical protein H5410_024800 [Solanum commersonii]7.1e-0547.67Show/hide
Query:  SKSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTTY------------------------GAPRDNDNISTPSAMASSNAFMIDDP
        SKS S+V AATV I GA+LTT    GPSFPAEQ T                           P D+D  STPSA+ASSNAF+I DP
Subjt:  SKSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTTY------------------------GAPRDNDNISTPSAMASSNAFMIDDP

KVI09885.1 hypothetical protein Ccrd_011735 [Cynara cardunculus var. scolymus]2.9e-0636.54Show/hide
Query:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA
        M+ AAT   HG  L  DP +GPSFPAE  T                                      AI   G PP A         AL TA PA VDA
Subjt:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA

Query:  TWVPCPAPSRGEWYRIP---SLSELSYNTVPFHLDGIGLIPLSLKLSDSGQIPIFS
          VP P+ S  +    P   S  +L  +  PFHL G G  P SLKLSDSGQ P+ S
Subjt:  TWVPCPAPSRGEWYRIP---SLSELSYNTVPFHLDGIGLIPLSLKLSDSGQIPIFS

TQD89411.1 hypothetical protein C1H46_025054 [Malus baccata]4.0e-0845.54Show/hide
Query:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA
        MV AAT   HGA         PS PA+  T        ++STPSAMASSNA  I   R P+  QTLY A+   G  PLA         AL T  PAAVDA
Subjt:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA

Query:  TWVPCPAPSRGE
         WVP P+ S G+
Subjt:  TWVPCPAPSRGE

TrEMBL top hitse value%identityAlignment
A0A0A9EXJ6 Uncharacterized protein4.2e-1133.5Show/hide
Query:  KSLSMVEAATVIIHGASLTTDPEVGPSFPAEQ-------------TTYGA--------PRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGE
        K  S V A TV+IHGA  T D   GP FPAE              T  G+        P +++  STPS+MA S    + + + P    TLY A   PG 
Subjt:  KSLSMVEAATVIIHGASLTTDPEVGPSFPAEQ-------------TTYGA--------PRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGE

Query:  PPLAYD-------ALATALPAAVDATWVPCPAPSRGE---------------WYRIPSLSELS-------------YNTVPFHLDGIGLIPLSLKLSDSG
         P A         A AT  PAAVDA  VPCP+ SRG+               W R  + + +S              + +P H  G G  P S KL  SG
Subjt:  PPLAYD-------ALATALPAAVDATWVPCPAPSRGE---------------WYRIPSLSELS-------------YNTVPFHLDGIGLIPLSLKLSDSG

Query:  QIPIFS
        Q P+ S
Subjt:  QIPIFS

A0A0A9RCA4 Uncharacterized protein5.2e-0946.6Show/hide
Query:  MVEAATVIIHGASLTTDPEVGPSFPAEQTT-----------------------YG-APRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEP
        MV AATV IHGA+ TT    GP  PAE  T                       YG APR+ D +STPSAMASS    + DP QP++ QT YMA L+  EP
Subjt:  MVEAATVIIHGASLTTDPEVGPSFPAEQTT-----------------------YG-APRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEP

Query:  PLA
        PLA
Subjt:  PLA

A0A0P0VHF2 Os02g0269400 protein7.0e-1437.95Show/hide
Query:  KSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTT--------------YGAPRDNDNISTPSAMASSNAF-MIDDPR-QPSATQTLYMAILEPGEPPLAY
        K  SMV AATV+ HG    T  +VGPSFP   TT               G P D+DN STPS MASS A      P+  P+  QTLY A    G PP A 
Subjt:  KSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTT--------------YGAPRDNDNISTPSAMASSNAF-MIDDPR-QPSATQTLYMAILEPGEPPLAY

Query:  DA---------LATALPAAVDATWVPCPAPSRG--------------EWYRIPSLSELSYNTV--------PFHLDGIGLIPLSLKLSDSGQIPI
         A           T  PA V+A  VP P  S G              E++R P +  L +  +        PFH  G G  P SLKL DSG IP+
Subjt:  DA---------LATALPAAVDATWVPCPAPSRG--------------EWYRIPSLSELSYNTV--------PFHLDGIGLIPLSLKLSDSGQIPI

A0A118K5Z7 Uncharacterized protein1.4e-0636.54Show/hide
Query:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA
        M+ AAT   HG  L  DP +GPSFPAE  T                                      AI   G PP A         AL TA PA VDA
Subjt:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA

Query:  TWVPCPAPSRGEWYRIP---SLSELSYNTVPFHLDGIGLIPLSLKLSDSGQIPIFS
          VP P+ S  +    P   S  +L  +  PFHL G G  P SLKLSDSGQ P+ S
Subjt:  TWVPCPAPSRGEWYRIP---SLSELSYNTVPFHLDGIGLIPLSLKLSDSGQIPIFS

A0A540LSD7 Uncharacterized protein2.0e-0845.54Show/hide
Query:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA
        MV AAT   HGA         PS PA+  T        ++STPSAMASSNA  I   R P+  QTLY A+   G  PLA         AL T  PAAVDA
Subjt:  MVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYD-------ALATALPAAVDA

Query:  TWVPCPAPSRGE
         WVP P+ S G+
Subjt:  TWVPCPAPSRGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCAAAATCCCTATCAATGGTGGAGGCAGCCACTGTTATAATCCACGGCGCGTCGTTGACCACTGATCCCGAAGTGGGGCCGTCGTTTCCAGCGGAGCAGACAAC
TTACGGTGCACCGAGAGATAACGACAATATATCGACCCCATCGGCGATGGCATCATCAAACGCCTTCATGATTGACGATCCACGACAGCCGTCGGCCACGCAGACTCTGT
ACATGGCGATCCTTGAGCCGGGGGAGCCCCCCTTGGCCTACGATGCATTAGCCACGGCGCTTCCGGCCGCCGTTGATGCCACGTGGGTGCCATGTCCAGCTCCGTCTCGA
GGTGAGTGGTACCGTATTCCGTCGCTCTCAGAACTTTCGTATAATACAGTACCTTTCCACCTCGACGGTATTGGACTCATACCCTTGTCACTAAAACTCTCTGATTCCGG
CCAGATACCTATATTTTCCGGCGAGTATGTCCAAGATGCCGATAATGGTATCATGAAAACTGGTGGTGGAGAAGAGCGTGCGCCATGGTTAAAAATGGTGGAGATTTTGG
AGATCACAGATCAATCAAGCCCATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCAAAATCCCTATCAATGGTGGAGGCAGCCACTGTTATAATCCACGGCGCGTCGTTGACCACTGATCCCGAAGTGGGGCCGTCGTTTCCAGCGGAGCAGACAAC
TTACGGTGCACCGAGAGATAACGACAATATATCGACCCCATCGGCGATGGCATCATCAAACGCCTTCATGATTGACGATCCACGACAGCCGTCGGCCACGCAGACTCTGT
ACATGGCGATCCTTGAGCCGGGGGAGCCCCCCTTGGCCTACGATGCATTAGCCACGGCGCTTCCGGCCGCCGTTGATGCCACGTGGGTGCCATGTCCAGCTCCGTCTCGA
GGTGAGTGGTACCGTATTCCGTCGCTCTCAGAACTTTCGTATAATACAGTACCTTTCCACCTCGACGGTATTGGACTCATACCCTTGTCACTAAAACTCTCTGATTCCGG
CCAGATACCTATATTTTCCGGCGAGTATGTCCAAGATGCCGATAATGGTATCATGAAAACTGGTGGTGGAGAAGAGCGTGCGCCATGGTTAAAAATGGTGGAGATTTTGG
AGATCACAGATCAATCAAGCCCATACTAA
Protein sequenceShow/hide protein sequence
MDSKSLSMVEAATVIIHGASLTTDPEVGPSFPAEQTTYGAPRDNDNISTPSAMASSNAFMIDDPRQPSATQTLYMAILEPGEPPLAYDALATALPAAVDATWVPCPAPSR
GEWYRIPSLSELSYNTVPFHLDGIGLIPLSLKLSDSGQIPIFSGEYVQDADNGIMKTGGGEERAPWLKMVEILEITDQSSPY