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Lsi04G017690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionActin-binding transcription modulator
Genome locationchr04:24929281..24931410
RNA-Seq ExpressionLsi04G017690
SyntenyLsi04G017690
Gene Ontology termsNA
InterPro domainsIPR039169 - Protein Abitram


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063309.1 protein Simiate [Cucumis melo var. makuwa]7.2e-3561.27Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        ++EGHDQYVYRHANGLCVIGLAATHIAFKD GGVTAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH
              HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH

KAF4388461.1 hypothetical protein F8388_012438 [Cannabis sativa]1.2e-3475.27Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV
        ++ GHDQYVYRHANGLCVIGLA TH+AFKD GG+TAVDFNVGKS+RS  KVTGKRKKA REGYI I+MP+ ADWLK+K+SL+  E+YK+LRE+
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV

XP_008466465.1 PREDICTED: protein Simiate [Cucumis melo]7.2e-3561.27Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        ++EGHDQYVYRHANGLCVIGLAATHIAFKD GGVTAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH
              HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH

XP_022142526.1 protein Simiate [Momordica charantia]7.2e-3560.99Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        M++GHDQYVYRHANGLCVIGLA+THIAFKDSGG+TAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV
             AHREGYIAIVMPK ADWLKVKESLLSLE+YKRLRE+
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV

XP_038896120.1 protein Abitram [Benincasa hispida]6.5e-3662.68Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        ++EGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH
             AHREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH

TrEMBL top hitse value%identityAlignment
A0A1S4E5T9 Actin-binding transcription modulator3.5e-3561.27Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        ++EGHDQYVYRHANGLCVIGLAATHIAFKD GGVTAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH
              HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH

A0A5A7VCI3 Actin-binding transcription modulator3.5e-3561.27Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        ++EGHDQYVYRHANGLCVIGLAATHIAFKD GGVTAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH
              HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH

A0A5D3E6L9 Actin-binding transcription modulator3.5e-3561.27Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        ++EGHDQYVYRHANGLCVIGLAATHIAFKD GGVTAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH
              HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH

A0A6J1CMG0 Actin-binding transcription modulator3.5e-3560.99Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------
        M++GHDQYVYRHANGLCVIGLA+THIAFKDSGG+TAVDFNVGKSDRSSFKVTGKRKK                                           
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK-------------------------------------------

Query:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV
             AHREGYIAIVMPK ADWLKVKESLLSLE+YKRLRE+
Subjt:  -----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV

A0A7J6H0B3 Uncharacterized protein6.0e-3575.27Show/hide
Query:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV
        ++ GHDQYVYRHANGLCVIGLA TH+AFKD GG+TAVDFNVGKS+RS  KVTGKRKKA REGYI I+MP+ ADWLK+K+SL+  E+YK+LRE+
Subjt:  MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75980.1 Single hybrid motif superfamily protein5.7e-3049.29Show/hide
Query:  EEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK--------------------------------------------
        + GHDQY+YRHANGLCVIGLA THIAFKD GG+T+VDFNVGKSDRS  KV+GKRKK                                            
Subjt:  EEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKK--------------------------------------------

Query:  ----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV
            A REGYIAI+MP+ ADW K KESL++LE+YK  +E+
Subjt:  ----AHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGT
TGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACT
GGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGT
TGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACT
GGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGAGTCATTCATCCGCATACAGAAACAAGTAACTTTTAGATTTCTTCC
ATTGATGCTTTCCTCCATCTGTTCTTTAACTCGCCAGGTTTATCTCGTAGCATATTTTAACAGGACTGCCGAGTGATAATAATTCACTCAATTCTGGTAAGCTTGAGAAT
ATATTATATATAGGGTTTGAACTTTCAATCCTTATATCTTCCAGTTTTGGTAGTTGAACTTTATAAAAAGTCTTTGGTCCTTGCCACTTAATTTCAGCACTTCACTTAGC
AAAAATCTCATGTAGCATCATCATCATGTAGCCTTTTATTCAAGATTTTTATTAAATAGAATATAAGACTTTGACAAAATGACC
Protein sequenceShow/hide protein sequence
MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH