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Lsi04G017780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLYR motif-containing protein 2
Genome locationchr04:24982235..24983132
RNA-Seq ExpressionLsi04G017780
SyntenyLsi04G017780
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591251.1 LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2989.02Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEME NRSC++RQK+RFLLSEG+ERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]2.3e-2989.02Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEME NR C++RQK+RFLLSEGIERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
XP_022975831.1 uncharacterized protein LOC111476418 [Cucurbita maxima]4.0e-2990.24Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEME NRSC++RQKIRFLLSEG ERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
XP_023535371.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]8.0e-3090.24Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEME NRSC++RQK+RFLLSEGIERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
XP_038877724.1 uncharacterized protein LOC120069952 [Benincasa hispida]6.1e-3090.24Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        M LSLDLQ+FILRARVLKLYRQALRTARKAPVHAREEL++TMRQEME NR+CNERQKIR+L+SEGIERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112181.6e-2885.37Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        MV+SLDL EFILRARVLKL+RQALRTARKAPVHAREELR+T+RQEME NRSCN++QK+R+L+SEGIE LKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
A0A6J1F8N3 uncharacterized protein LOC1114433211.1e-2989.02Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEME NR C++RQK+RFLLSEGIERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
A0A6J1FM54 uncharacterized protein LOC1114464661.2e-2888.89Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGH
        MVLSLDLQEFILRARVLKLYR ALRTA+KAPVHAREELR+T+RQEME NR CNERQK+RFLLSEGIERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGH
A0A6J1IFA5 uncharacterized protein LOC1114764181.9e-2990.24Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
        MVL+LDLQEFILRARVLKLYRQALRT RKAPVHAREELR+T+RQEME NRSC++RQKIRFLLSEG ERLKRLDEMLDMQGHS
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS
A0A6J1IY12 uncharacterized protein LOC1114809621.8e-2787.65Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGH
        MVLSLDLQEFILRARVLKLYRQALR A+KAPVHAREELR  +RQEME NR CNERQK+RFLLSEGIERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGH
SwissProt top hitse value%identityAlignment
Q5RES3 LYR motif-containing protein 23.5e-0436.49Show/hide
Query:  SLDLQEFILRARVLKLYRQALRTARKAPVHA-REELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEML
        +L L++F+ R +VL LYR+ L+T R+ P  + R+ L++  R+E ++N+S  E   IR ++++G  +LK L++ L
Subjt:  SLDLQEFILRARVLKLYRQALRTARKAPVHA-REELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEML
Q9NU23 LYR motif-containing protein 24.6e-0436.49Show/hide
Query:  SLDLQEFILRARVLKLYRQALRTARKAPVHA-REELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEML
        +L L++F+ R +VL LYR+ L+T R+ P  + R+ L++  R+E  +N+S  E   IR ++++G  +LK L++ L
Subjt:  SLDLQEFILRARVLKLYRQALRTARKAPVHA-REELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEML
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein6.7e-2773.75Show/hide
Query:  VLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGH
        ++ LDLQ FILRARVLKLYRQAL+ A +APVH R EL+ T+RQEMEKNR CN++QKIR+L+SEG+ER+K LDEMLDMQGH
Subjt:  VLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCCCTTGATTTACAGGAATTTATTCTCCGGGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTCGAGAGGA
ACTGAGGAACACGATGAGACAAGAAATGGAGAAGAACCGCAGCTGCAATGAGAGACAGAAAATAAGATTTCTGCTTAGTGAAGGAATAGAGAGATTGAAGCGTTTAGATG
AGATGTTGGATATGCAAGGTCATTCATAA
mRNA sequenceShow/hide mRNA sequence
GCCGAATAGCAGGCTTCTCCAGAACAACGTCGTCTTCCGTCGCTGCCTCGACTGAGAACTCGAAACTGAACCAGGTTCGATTGAATCAGACATGAAATTCACTTCACTTT
AATCTGCAGCAGTCGACTCGACCAACTGTGTTACCCACTTCCTTTTGTTCTCTAGGGAAGAGAGCTCGCCATGGTTCTCTCCCTTGATTTACAGGAATTTATTCTCCGGG
CAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTCGAGAGGAACTGAGGAACACGATGAGACAAGAAATGGAGAAGAACCGC
AGCTGCAATGAGAGACAGAAAATAAGATTTCTGCTTAGTGAAGGAATAGAGAGATTGAAGCGTTTAGATGAGATGTTGGATATGCAAGGTCATTCATAA
Protein sequenceShow/hide protein sequence
MVLSLDLQEFILRARVLKLYRQALRTARKAPVHAREELRNTMRQEMEKNRSCNERQKIRFLLSEGIERLKRLDEMLDMQGHS