; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G017840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G017840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionhigh mobility group B protein 9
Genome locationchr04:25054509..25056400
RNA-Seq ExpressionLsi04G017840
SyntenyLsi04G017840
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001606 - ARID DNA-binding domain
IPR009071 - High mobility group box domain
IPR036431 - ARID DNA-binding domain superfamily
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145526.1 high mobility group B protein 9 [Cucumis sativus]1.0e-17393.56Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R +RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  T+VDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_008452910.1 PREDICTED: high mobility group B protein 9 [Cucumis melo]3.9e-17393.25Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_022140929.1 high mobility group B protein 9 [Momordica charantia]4.6e-16690.8Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+KSWN G DKHYP +LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPF FGSP+SENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        S+LRPQS NAIVPYTG R  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMRQATD+    NYSKHGE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_022975460.1 high mobility group B protein 9 isoform X2 [Cucurbita maxima]3.0e-16590.18Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKS NGG+DK YPP LATHDEV+SDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLF RQGPI  PQAPF FGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHP++P P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRPQ TNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR A+D   A NYSK GE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_038899499.1 high mobility group B protein 9-like [Benincasa hispida]1.1e-17293.25Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPA TKSWNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFP GSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSE+LRGVLYHP+QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRPQSTNAIVPYTG R +RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMRQA+DVDG   YSKHGE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

TrEMBL top hitse value%identityAlignment
A0A0A0L181 Uncharacterized protein4.9e-17493.56Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R +RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  T+VDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

A0A1S3BUE9 high mobility group B protein 91.9e-17393.25Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

A0A5A7VAK3 High mobility group B protein 91.9e-17393.25Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

A0A6J1CH52 high mobility group B protein 92.2e-16690.8Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+KSWN G DKHYP +LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPF FGSP+SENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        S+LRPQS NAIVPYTG R  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMRQATD+    NYSKHGE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

E5GCD0 High mobility group family1.9e-17393.25Show/hide
Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE         VVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

SwissProt top hitse value%identityAlignment
P87057 Non-histone chromosomal protein 65.9e-0740Show/hide
Query:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNRE-REFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM
        R  +S RK DPN PK N S + FF  E   K+K+  P+    +   ++G+ W  L+  ER  Y+    +DKERY+RE KEY  K+
Subjt:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNRE-REFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM

Q9LG02 Putative high mobility group B protein 114.2e-3732.51Show/hide
Query:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFV
        PA   + +  +  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++E         V+ +++ +EV   F F  T T+++FV
Subjt:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFV

Query:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQP
        LRK YL +L+ +E +Y F         QAP    S   E E AL     K+      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH    
Subjt:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQP

Query:  PPSDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY
                    I P T        G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RY
Subjt:  PPSDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY

Query:  KRELKEYKEKMR-QATDVDGATN
        K E+ +Y+  M  +  ++  AT+
Subjt:  KRELKEYKEKMR-QATDVDGATN

Q9LTT3 High mobility group B protein 106.2e-4941.81Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ E         VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQSTNAIVPYTGVRHHR
         + P+   Q+     +  +   LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P  P  S    ++ +AIV        +
Subjt:  RQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQSTNAIVPYTGVRHHR

Query:  HSGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
         S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  HSGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Q9MAT6 High mobility group B protein 151.3e-6241.93Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVVA---------EKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EV +         E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVVA---------EKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQST
          G I       P   P           EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   PQ +
Subjt:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQST

Query:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE
        + ++P T            GV   R   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKE
Subjt:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQATDVDGA
        RY+ E+++Y+EK +    +  A
Subjt:  RYKRELKEYKEKMRQATDVDGA

Q9SGS2 High mobility group B protein 94.8e-10264.47Show/hide
Query:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY E         VV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPPSDLRPQS-
        EQV+LF  +GP+  P A F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPPSDLRPQS-

Query:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
          NA+VPY      R    + RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY+
Subjt:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        E +R
Subjt:  EKMR

Arabidopsis top hitse value%identityAlignment
AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain9.1e-6441.93Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVVA---------EKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EV +         E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVVA---------EKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQST
          G I       P   P           EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   PQ +
Subjt:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQST

Query:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE
        + ++P T            GV   R   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKE
Subjt:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQATDVDGA
        RY+ E+++Y+EK +    +  A
Subjt:  RYKRELKEYKEKMRQATDVDGA

AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain3.0e-3832.51Show/hide
Query:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFV
        PA   + +  +  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++E         V+ +++ +EV   F F  T T+++FV
Subjt:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFV

Query:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQP
        LRK YL +L+ +E +Y F         QAP    S   E E AL     K+      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH    
Subjt:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQP

Query:  PPSDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY
                    I P T        G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RY
Subjt:  PPSDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY

Query:  KRELKEYKEKMR-QATDVDGATN
        K E+ +Y+  M  +  ++  AT+
Subjt:  KRELKEYKEKMR-QATDVDGATN

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain3.4e-10364.47Show/hide
Query:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY E         VV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPPSDLRPQS-
        EQV+LF  +GP+  P A F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPPSDLRPQS-

Query:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
          NA+VPY      R    + RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY+
Subjt:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        E +R
Subjt:  EKMR

AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain4.4e-5041.81Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ E         VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSE---------VVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQSTNAIVPYTGVRHHR
         + P+   Q+     +  +   LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P  P  S    ++ +AIV        +
Subjt:  RQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPPPSDLRPQSTNAIVPYTGVRHHR

Query:  HSGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
         S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  HSGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

AT3G28730.1 high mobility group4.3e-0530Show/hide
Query:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATD
        + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W  +S +++  Y+     DK+RYK E+ +YK       D
Subjt:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCGCCGGCTAGGACTAAGAGCTGGAACGGTGGACTCGATAAACATTATCCTCCGTCGCTCGCCACCCACGATGAAGTTATTTCCGACCCCATTGTTTTTTGGGA
TACTTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATTCAGAGGTTGTTGCAGAGAAGA
AATGGAGAGAAGTTGGAAGTGTATTCAAGTTTTCTCCTACAACGACGAGTGCTTCCTTTGTATTGAGAAAACATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTAT
TTGTTCGGCCGTCAGGGCCCCATCTGTGTCCCTCAAGCGCCATTTCCTTTTGGTAGCCCTACCAGTGAAAACGAATTGGCTCTTGTGGAATATACTCCCAAAACTACGTC
GTTTTCCCCTGGTCCGCCCGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTTGTGACTGTGAAATTGGGATCTGAGGTTCTAAGAGGAGTTCTTT
ACCATCCAGACCAGCCACCTCCGTCGGATCTCCGCCCTCAGTCTACCAACGCCATTGTACCGTATACCGGCGTCAGACATCATCGACATTCCGGTCGGCGGCACCGGAGG
AGCCGGAGAAAGGGAGATCCGAACCACCCAAAACCAAACAGAAGTGGGTATAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAG
GGAGTTCACTAAGATGATTGGAGAGTCGTGGAACAATCTTAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGA
AAGAGTATAAGGAGAAAATGAGGCAGGCAACTGATGTTGATGGAGCTACTAACTATTCAAAACATGGAGAGTAA
mRNA sequenceShow/hide mRNA sequence
CCTTTCTACACCACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTCTTCTTCTTCCTTTCTCTGATTTTTCCGGCCATGTCACCGCC
GGCTAGGACTAAGAGCTGGAACGGTGGACTCGATAAACATTATCCTCCGTCGCTCGCCACCCACGATGAAGTTATTTCCGACCCCATTGTTTTTTGGGATACTTTGAGGC
GTTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATTCAGAGGTTGTTGCAGAGAAGAAATGGAGAGAA
GTTGGAAGTGTATTCAAGTTTTCTCCTACAACGACGAGTGCTTCCTTTGTATTGAGAAAACATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTATTTGTTCGGCCG
TCAGGGCCCCATCTGTGTCCCTCAAGCGCCATTTCCTTTTGGTAGCCCTACCAGTGAAAACGAATTGGCTCTTGTGGAATATACTCCCAAAACTACGTCGTTTTCCCCTG
GTCCGCCCGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTTGTGACTGTGAAATTGGGATCTGAGGTTCTAAGAGGAGTTCTTTACCATCCAGAC
CAGCCACCTCCGTCGGATCTCCGCCCTCAGTCTACCAACGCCATTGTACCGTATACCGGCGTCAGACATCATCGACATTCCGGTCGGCGGCACCGGAGGAGCCGGAGAAA
GGGAGATCCGAACCACCCAAAACCAAACAGAAGTGGGTATAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACTA
AGATGATTGGAGAGTCGTGGAACAATCTTAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTATAAG
GAGAAAATGAGGCAGGCAACTGATGTTGATGGAGCTACTAACTATTCAAAACATGGAGAGTAACAGAGGAGGAAGAGAGCTTTCAGCAGTTTTTAGGTTTTTTTTGGGAT
CTGCTAAAGTTATATGATATATAGATTTTGTATCATATCCATATCCTCCTAACTTTACATGGCAAACCATAGGTTCTCATATCCATAGTGCTTGGCCACAAGTTTTACAG
TCACTTTACAAAGTTCAGTAGTTCACTCTTGGAACTGAC
Protein sequenceShow/hide protein sequence
MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVY
LFGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPPSDLRPQSTNAIVPYTGVRHHRHSGRRHRR
SRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATDVDGATNYSKHGE