CuGenDBv2

Gene ID	Lsi04G017910
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Large proline-rich protein BAG6 isoform X2
Genome location	chr04:25125401..25131211
RNA-Seq Expression	Lsi04G017910
Synteny	Lsi04G017910
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0071818 - BAT3 complex (cellular component) GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function) GO:0051787 - misfolded protein binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK19967.1 large proline-rich protein BAG6 isoform X2 [Cucumis melo var. makuwa]

1.4e-91

69.07

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Query:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS
        MNRFERA  ISQNGG  P FELPTNPQELQ+PESL IVLRNAQ+LLSDYAI SLP                      EELVQVGLRMQ FGALLLD+GSS
Subjt:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS

Query:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFSLLVCLRVGGFRCYSPPMAPSAPSSSTPEFQMPK
        ILTLRLEQST+DLQDLA RVVSTNCPMDVFRAVVESSARISGSS  + ++                             +  PMAPSAPSSSTPEFQM K
Subjt:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFSLLVCLRVGGFRCYSPPMAPSAPSSSTPEFQMPK

Query:  KPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRLRLLFSEED
        KPL  +AN LK KD  IQ  AMTGILLLS RSLGQKYRI++LQEDTTALKQE ETL+DRMKNIKR LLHEASLESTGLFASRLRLLFS+ED
Subjt:  KPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRLRLLFSEED

XP_008452931.1 PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo]

1.8e-46

67.66

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Query:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS
        MNRFERA  ISQNGG  P FELPTNPQELQ+PESL IVLRNAQ+LLSDYAI SLP                      EELVQVGLRMQ FGALLLD+GSS
Subjt:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS

Query:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS
        ILTLRLEQST+DLQDLA RVVSTNCPMDVFRAVVESSARISGSS  + ++ L    SL +   E+ +
Subjt:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS

XP_011654258.1 uncharacterized protein LOC101215937 isoform X1 [Cucumis sativus]

4.0e-46

64.94

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Query:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS
        MNRFERA  ISQNGG  P FELPTNPQELQ+PESL IVLRNAQ+LLSDYAI SLP                      EELVQVGLRMQ FGALLLD+GSS
Subjt:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS

Query:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFSLLVCLRV
        ILTLR+EQST+DLQDLA RVVSTNCPMDVFRAVVESSARISGSS  + ++ L    SL +   E+ +  +  R+
Subjt:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFSLLVCLRV

XP_038897763.1 uncharacterized protein LOC120085692 [Benincasa hispida]

6.1e-47

97.22

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Query:  MAPSAPSSSTPEFQMPKKPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRL
        MAPSAPSSS PEFQ PKKPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKR LLHEASLESTGLFASRL
Subjt:  MAPSAPSSSTPEFQMPKKPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRL

Query:  RLLFSEED
        RLLFSEED
Subjt:  RLLFSEED

XP_038899964.1 uncharacterized protein LOC120087140 isoform X1 [Benincasa hispida]

1.1e-51

72.12

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Query:  MNRFERAISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSSIL
        MNRFERAISQNGGSLP FELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP                      EELVQ+GLRMQ FGALLLD+GSSIL
Subjt:  MNRFERAISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSSIL

Query:  TLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS
        TLRLEQSTIDLQDLA+RVVSTNCPMDVFRAVVESSARISGSS  + +  L    +L +   E+F+
Subjt:  TLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BUZ4 uncharacterized protein LOC103493795 isoform X2

1.6e-45

67.66

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Query:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS
        MNRFERA  ISQNGG+ P FELPTNPQELQ+PESL IVLRNAQ+LLSDYAI SLP                      EELVQVGLRMQ FGALLLD+GSS
Subjt:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS

Query:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS
        ILTLRLEQST+DLQDLA RVVSTNCPMDVFRAVVESSARISGSS  + ++ L    SL +   E+ +
Subjt:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS

A0A1S3BV17 uncharacterized protein LOC103493795 isoform X1

8.7e-47

67.66

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Query:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS
        MNRFERA  ISQNGG  P FELPTNPQELQ+PESL IVLRNAQ+LLSDYAI SLP                      EELVQVGLRMQ FGALLLD+GSS
Subjt:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS

Query:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS
        ILTLRLEQST+DLQDLA RVVSTNCPMDVFRAVVESSARISGSS  + ++ L    SL +   E+ +
Subjt:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS

A0A5A7VE91 Large proline-rich protein bag6-B isoform X1

8.7e-47

67.66

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Query:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS
        MNRFERA  ISQNGG  P FELPTNPQELQ+PESL IVLRNAQ+LLSDYAI SLP                      EELVQVGLRMQ FGALLLD+GSS
Subjt:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS

Query:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS
        ILTLRLEQST+DLQDLA RVVSTNCPMDVFRAVVESSARISGSS  + ++ L    SL +   E+ +
Subjt:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFS

A0A5D3D8R1 Large proline-rich protein BAG6 isoform X2

6.8e-92

69.07

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Query:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS
        MNRFERA  ISQNGG  P FELPTNPQELQ+PESL IVLRNAQ+LLSDYAI SLP                      EELVQVGLRMQ FGALLLD+GSS
Subjt:  MNRFERA--ISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLP----------------------EELVQVGLRMQHFGALLLDIGSS

Query:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFSLLVCLRVGGFRCYSPPMAPSAPSSSTPEFQMPK
        ILTLRLEQST+DLQDLA RVVSTNCPMDVFRAVVESSARISGSS  + ++                             +  PMAPSAPSSSTPEFQM K
Subjt:  ILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVVESSARISGSSNDNTSHLLLPSPSLYDRERELFSLLVCLRVGGFRCYSPPMAPSAPSSSTPEFQMPK

Query:  KPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRLRLLFSEED
        KPL  +AN LK KD  IQ  AMTGILLLS RSLGQKYRI++LQEDTTALKQE ETL+DRMKNIKR LLHEASLESTGLFASRLRLLFS+ED
Subjt:  KPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRLRLLFSEED

A0A6J1FDG4 uncharacterized protein LOC111443106

9.6e-46

93.52

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Query:  MAPSAPSSSTPEFQMPKKPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRL
        MAPS+PSSS PEFQMPKKPLSLFANALKRKDSFIQFFAMTGILLLS RSLGQKYRIHDLQEDTTALKQEQETL+DRMKNIKR LLHEASL+STGLFASRL
Subjt:  MAPSAPSSSTPEFQMPKKPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRL

Query:  RLLFSEED
        RLLFS+ED
Subjt:  RLLFSEED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G20430.1 unknown protein

2.9e-26

58.77

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Query:  MAPSAPSSSTPEF--QMPKKPLS-----LFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLEST
        MA SAP  S      + P K L+      F N  K K SF QF AMTGILLLSFRS+ QKYRIHDL+EDT  LK+EQ++L DRM  IK  LLH+AS++S+
Subjt:  MAPSAPSSSTPEF--QMPKKPLS-----LFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQEDTTALKQEQETLIDRMKNIKRRLLHEASLEST

Query:  GLFASRLRLLFSEE
        G+FASRLRLLF E+
Subjt:  GLFASRLRLLFSEE

AT5G42220.1 Ubiquitin-like superfamily protein

6.6e-15

43.59

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Query:  MNRFERAISQNG----------GSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLPE----------------------ELVQVGLRMQHFGA
        +NR E+A+SQNG          G  P  ELP N +   TPE+L +VLRNAQ LLS   +SSL                        E VQVGL MQH GA
Subjt:  MNRFERAISQNG----------GSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLPE----------------------ELVQVGLRMQHFGA

Query:  LLLDIGSSILTLRLEQS
        LLL++G +ILTLR+  S
Subjt:  LLLDIGSSILTLRLEQS

Sequences

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CDS sequence

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ATGAACCGATTCGAGCGCGCAATATCTCAAAATGGTGGAAGTCTACCAGGGTTTGAACTGCCCACCAATCCTCAAGAATTGCAAACCCCTGAATCTTTGGGTATTGTTTT
GCGAAATGCACAACGACTCCTAAGTGATTATGCTATATCTTCACTACCGGAAGAATTAGTTCAAGTAGGCCTTAGAATGCAACATTTTGGAGCGCTTCTTCTGGATATTG
GCAGTTCAATCTTGACACTCCGTTTGGAACAATCAACTATTGACCTCCAAGACCTTGCTCGAAGGGTTGTATCTACCAATTGTCCAATGGATGTGTTTCGTGCTGTGGTG
GAGAGTTCAGCTCGAATTTCTGGGAGTAGTAACGATAATACTTCCCATTTGCTTCTCCCTAGTCCCTCGCTTTACGATCGAGAGAGAGAATTATTCAGCCTACTCGTCTG
CCTTCGTGTTGGGGGTTTTCGCTGTTACAGTCCTCCCATGGCGCCTTCAGCTCCGTCAAGCTCAACCCCTGAATTTCAAATGCCCAAAAAGCCACTCAGTTTATTCGCTA
ACGCACTAAAACGCAAGGATAGCTTCATTCAGTTCTTCGCCATGACTGGTATTTTGCTTCTAAGCTTCCGATCTTTGGGTCAGAAGTACCGTATCCACGACCTTCAAGAG
GACACTACGGCTCTCAAACAAGAACAGGAAACCCTAATTGACCGTATGAAGAACATCAAGCGCAGACTCCTTCATGAGGCATCCCTCGAGTCCACTGGCCTCTTCGCATC
CAGGCTTCGCCTTCTCTTCAGCGAAGAAGATTGA

mRNA sequence

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AAATTTGTTGCCTCATTGGTGTACATTCATTACCCATCAATCATTGAAACAGAAAAATTTGAAGAATACAAGATTCATATTGAATCAACATCCTTTGATATTCAAATGAA
AATGTCCTAAAGGATGAATCTACTCTCTAACTATATCATATTCTTCCATTTTCTCTCTTTTCATTCCTCAATTCCATTTGTTTGCCTTCAATTCTTCATTCTTTCACAAC
AATTTCTGTGTTCATGAACCGATTCGAGCGCGCAATATCTCAAAATGGTGGAAGTCTACCAGGGTTTGAACTGCCCACCAATCCTCAAGAATTGCAAACCCCTGAATCTT
TGGGTATTGTTTTGCGAAATGCACAACGACTCCTAAGTGATTATGCTATATCTTCACTACCGGAAGAATTAGTTCAAGTAGGCCTTAGAATGCAACATTTTGGAGCGCTT
CTTCTGGATATTGGCAGTTCAATCTTGACACTCCGTTTGGAACAATCAACTATTGACCTCCAAGACCTTGCTCGAAGGGTTGTATCTACCAATTGTCCAATGGATGTGTT
TCGTGCTGTGGTGGAGAGTTCAGCTCGAATTTCTGGGAGTAGTAACGATAATACTTCCCATTTGCTTCTCCCTAGTCCCTCGCTTTACGATCGAGAGAGAGAATTATTCA
GCCTACTCGTCTGCCTTCGTGTTGGGGGTTTTCGCTGTTACAGTCCTCCCATGGCGCCTTCAGCTCCGTCAAGCTCAACCCCTGAATTTCAAATGCCCAAAAAGCCACTC
AGTTTATTCGCTAACGCACTAAAACGCAAGGATAGCTTCATTCAGTTCTTCGCCATGACTGGTATTTTGCTTCTAAGCTTCCGATCTTTGGGTCAGAAGTACCGTATCCA
CGACCTTCAAGAGGACACTACGGCTCTCAAACAAGAACAGGAAACCCTAATTGACCGTATGAAGAACATCAAGCGCAGACTCCTTCATGAGGCATCCCTCGAGTCCACTG
GCCTCTTCGCATCCAGGCTTCGCCTTCTCTTCAGCGAAGAAGATTGA

Protein sequence

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MNRFERAISQNGGSLPGFELPTNPQELQTPESLGIVLRNAQRLLSDYAISSLPEELVQVGLRMQHFGALLLDIGSSILTLRLEQSTIDLQDLARRVVSTNCPMDVFRAVV
ESSARISGSSNDNTSHLLLPSPSLYDRERELFSLLVCLRVGGFRCYSPPMAPSAPSSSTPEFQMPKKPLSLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYRIHDLQE
DTTALKQEQETLIDRMKNIKRRLLHEASLESTGLFASRLRLLFSEED

Lsi04G017910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome