CuGenDBv2

Gene ID	Lsi04G018200
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	coiled-coil domain-containing protein 115
Genome location	chr04:25388482..25390948
RNA-Seq Expression	Lsi04G018200
Synteny	Lsi04G018200
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0042406 - extrinsic component of endoplasmic reticulum membrane (cellular component) GO:0051082 - unfolded protein binding (molecular function)
InterPro domains	IPR040357 - Vma22/CCDC115

Homology

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GenBank top hits

e value

%identity

Alignment

TYK19938.1 coiled-coil domain-containing protein 115 isoform X1 [Cucumis melo var. makuwa]

5.9e-71

68.26

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Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MK+ QD SLDSEIESEEEDGVE +QQEQQ+P+RQDQEL LLQF+DSTDDYL+LLDALS TLR+GWFELASARHSMGTSRISTALLDLK+HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  SIG QPFINLRKWTSSEGG+C GEEK+N+KLQR SDSPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT
         A+EIIVGIANKRIAMLSSFD+VKKGLEDT
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT

XP_004145554.1 coiled-coil domain-containing protein 115 [Cucumis sativus]

1.5e-74

68.85

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Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MKE+Q+ S DSEIESEEEDG E TQQEQQNP+ QDQEL LLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLD+K HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  S+G QPFINLRKWTSSEGGD  GEEK+N+KLQR S SPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEELEDTK
         A+E+IV IANKRIAMLSSFD+VKKG EDTSSFKQVKEELEDTK
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEELEDTK

XP_008452988.1 PREDICTED: uncharacterized protein LOC103493827 isoform X1 [Cucumis melo]

5.9e-71

68.26

Show/hide

Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MK+ QD SLDSEIESEEEDGVE +QQEQQ+P+RQDQEL LLQF+DSTDDYL+LLDALS TLR+GWFELASARHSMGTSRISTALLDLK+HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  SIG QPFINLRKWTSSEGG+C GEEK+N+KLQR SDSPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT
         A+EIIVGIANKRIAMLSSFD+VKKGLEDT
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT

XP_008452989.1 PREDICTED: uncharacterized protein LOC103493827 isoform X2 [Cucumis melo]

5.9e-71

68.26

Show/hide

Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MK+ QD SLDSEIESEEEDGVE +QQEQQ+P+RQDQEL LLQF+DSTDDYL+LLDALS TLR+GWFELASARHSMGTSRISTALLDLK+HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  SIG QPFINLRKWTSSEGG+C GEEK+N+KLQR SDSPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT
         A+EIIVGIANKRIAMLSSFD+VKKGLEDT
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT

XP_038899168.1 coiled-coil domain-containing protein 115 [Benincasa hispida]

3.4e-79

72.24

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Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        M E+QDLSLDSEIESEEEDGVE TQQEQ NPKRQDQEL  LQFLDSTDDYLNLLDALSATLR+GWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  SIGT PFINLRKWTSSEGGDC GEEK N+KLQR S+SPQLRQRNISELS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEELEDTKA
         A+EIIVGIANKRIAMLSSFDQ K GLE+TSSFKQVKEEL+DTKA
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEELEDTKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4M6 Uncharacterized protein

7.2e-75

68.85

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Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MKE+Q+ S DSEIESEEEDG E TQQEQQNP+ QDQEL LLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLD+K HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  S+G QPFINLRKWTSSEGGD  GEEK+N+KLQR S SPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEELEDTK
         A+E+IV IANKRIAMLSSFD+VKKG EDTSSFKQVKEELEDTK
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEELEDTK

A0A1S3BUK7 uncharacterized protein LOC103493827 isoform X2

2.8e-71

68.26

Show/hide

Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MK+ QD SLDSEIESEEEDGVE +QQEQQ+P+RQDQEL LLQF+DSTDDYL+LLDALS TLR+GWFELASARHSMGTSRISTALLDLK+HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  SIG QPFINLRKWTSSEGG+C GEEK+N+KLQR SDSPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT
         A+EIIVGIANKRIAMLSSFD+VKKGLEDT
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT

A0A1S3BVX7 uncharacterized protein LOC103493827 isoform X1

2.8e-71

68.26

Show/hide

Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MK+ QD SLDSEIESEEEDGVE +QQEQQ+P+RQDQEL LLQF+DSTDDYL+LLDALS TLR+GWFELASARHSMGTSRISTALLDLK+HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  SIG QPFINLRKWTSSEGG+C GEEK+N+KLQR SDSPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT
         A+EIIVGIANKRIAMLSSFD+VKKGLEDT
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT

A0A5D3D8T6 Coiled-coil domain-containing protein 115 isoform X1

2.8e-71

68.26

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Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MK+ QD SLDSEIESEEEDGVE +QQEQQ+P+RQDQEL LLQF+DSTDDYL+LLDALS TLR+GWFELASARHSMGTSRISTALLDLK+HSAATSLRVDE
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RD  SIG QPFINLRKWTSSEGG+C GEEK+N+KLQR SDSPQLRQRN+S+LS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT
         A+EIIVGIANKRIAMLSSFD+VKKGLEDT
Subjt:  -AVEIIVGIANKRIAMLSSFDQVKKGLEDT

A0A6J1FL58 coiled-coil domain-containing protein 115

2.4e-70

65.56

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Query:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE
        MKEIQD SLDS  ES EEDG+E TQQEQQ  KRQ++E  LLQFLDSTDDYLNLLDALS+TLRQGWF+LASARHSMGTSR+STALLDLKIHSAATSLRV+E
Subjt:  MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDE

Query:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------
        RDG SIGTQPFINLRKWTS+EGG+C  E+K+N+KL+R SD+PQLRQRNISELS                                               
Subjt:  RDGDSIGTQPFINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELS-----------------------------------------------

Query:  --AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEEL
          A+EIIV IANKR+AM SSFDQVKKGL+D SSF+QVKEEL
Subjt:  --AVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEEL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G20770.1 unknown protein

1.2e-21

42.07

Show/hide

Query:  SEIESEEEDGVEVTQQEQQNPK--RQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDERDGDSIGT
        +EI  E ++ V+V ++ +   +  +   +  +LQFLDS D YL L+D++++ LR+GWF+LASARHSMGT RI++ LLDLK H A+++L+V ++D +S+G+
Subjt:  SEIESEEEDGVEVTQQEQQNPK--RQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDERDGDSIGT

Query:  QPFINLRKWTSSEGGDCFGEEKFNEKLQRNSD--SPQLRQRNISE
         P   L KW +S+GG   G++   +         SPQLR R +SE
Subjt:  QPFINLRKWTSSEGGDCFGEEKFNEKLQRNSD--SPQLRQRNISE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGGAAATACAAGACCTATCACTGGATTCCGAAATCGAATCGGAGGAAGAAGATGGAGTTGAAGTAACGCAGCAAGAACAGCAAAATCCCAAACGACAAGATCAAGA
ACTCTTTTTGCTGCAATTCCTGGACTCCACGGATGATTATCTGAACCTCCTAGATGCATTGTCCGCAACACTCCGCCAGGGATGGTTCGAGTTGGCGAGCGCCAGACATT
CTATGGGTACCTCTCGCATAAGCACTGCATTACTAGACTTGAAAATCCATTCTGCTGCAACATCGCTGCGGGTGGACGAACGCGATGGTGACTCTATAGGAACGCAACCA
TTCATTAACTTGCGAAAGTGGACATCCTCTGAAGGTGGAGACTGTTTTGGGGAAGAAAAATTCAATGAAAAATTACAAAGGAATTCTGATAGTCCACAGCTACGGCAACG
GAACATTTCTGAGCTTTCTGCCGTTGAAATCATAGTGGGAATTGCAAATAAGCGTATTGCAATGTTATCTTCCTTTGATCAAGTCAAGAAAGGATTGGAAGACACATCTT
CCTTCAAGCAAGTCAAGGAAGAACTTGAAGACACCAAAGCATGA

mRNA sequence

Show/hide mRNA sequence

AGTGAGTAATATGGTGGGGAGTTAATTGAAATTTTAGCAAAATCACTTCAATAGCATTTGATTTCAGTTTAATCTGAGGTTCTGTTTTTAGAATCTGATGAACTTTCGAT
GAAGGAAATACAAGACCTATCACTGGATTCCGAAATCGAATCGGAGGAAGAAGATGGAGTTGAAGTAACGCAGCAAGAACAGCAAAATCCCAAACGACAAGATCAAGAAC
TCTTTTTGCTGCAATTCCTGGACTCCACGGATGATTATCTGAACCTCCTAGATGCATTGTCCGCAACACTCCGCCAGGGATGGTTCGAGTTGGCGAGCGCCAGACATTCT
ATGGGTACCTCTCGCATAAGCACTGCATTACTAGACTTGAAAATCCATTCTGCTGCAACATCGCTGCGGGTGGACGAACGCGATGGTGACTCTATAGGAACGCAACCATT
CATTAACTTGCGAAAGTGGACATCCTCTGAAGGTGGAGACTGTTTTGGGGAAGAAAAATTCAATGAAAAATTACAAAGGAATTCTGATAGTCCACAGCTACGGCAACGGA
ACATTTCTGAGCTTTCTGCCGTTGAAATCATAGTGGGAATTGCAAATAAGCGTATTGCAATGTTATCTTCCTTTGATCAAGTCAAGAAAGGATTGGAAGACACATCTTCC
TTCAAGCAAGTCAAGGAAGAACTTGAAGACACCAAAGCATGACAATCATTTGTTTCCCTCCTGATAATTCTTTTTTTTTAATTTCCTCAAAGTTTTCTATGATAGCAAGT
GGGATGCAATGTCCATTGTTTAAATTAATGGATTTGTTTGGTTTTTTATAGACTCTGTATTCTTCAAAGTTGCAGCAGAAATGGATTAATATGACTGAATTTTGAGTTGC
TTGTCACATGTACGTCTTTAATTATTGTTTGATATTACTTTATAATCAGATTCGTGTAATGTATTGTTCTTTTTCATAACAAAGCAAGCAATATTTCACCAATTTAGCCC
TGTTTACAACTACTAGAATAACTCATCAAGCTGTCTTTATTAAGTATCTATATGAGGCAACATATGTGCGATCTTGCATCTAACTCGCCCAAGAAAAGTCTTTTCTTTTT
CAAAACATGTCATCATAAACGTCATGAAATCAATACATAAAGCACCACCATAACATACAAAAATATGACCATCCAGCTCACGATCTTCCAAGCCAT

Protein sequence

Show/hide protein sequence

MKEIQDLSLDSEIESEEEDGVEVTQQEQQNPKRQDQELFLLQFLDSTDDYLNLLDALSATLRQGWFELASARHSMGTSRISTALLDLKIHSAATSLRVDERDGDSIGTQP
FINLRKWTSSEGGDCFGEEKFNEKLQRNSDSPQLRQRNISELSAVEIIVGIANKRIAMLSSFDQVKKGLEDTSSFKQVKEELEDTKA

Lsi04G018200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome