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Lsi04G018320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G018320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein, group 6
Genome locationchr04:25453579..25455379
RNA-Seq ExpressionLsi04G018320
SyntenyLsi04G018320
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]1.1e-3290.8Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        EEQ Q QMM K EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSG+PEV+PTTIDVVTKQGLI
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

KAE8649966.1 hypothetical protein Csa_012992 [Cucumis sativus]6.9e-3286.67Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        SN EEQ Q QMM K EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPN  GGGTDAPTLSGSG PEV+PTTID+VTKQGLI
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]3.2e-2975.76Show/hide
Query:  KMEKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP
        K E+++  + QPQ + M K+ EEKA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPN   GGGGTDAPTLSG+GFPEVKP+TIDV T QGLIP
Subjt:  KMEKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]2.5e-2980Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        S  E+Q QQQ++ +KEEK  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]4.9e-3081.11Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        S  E+Q QQQ++ +KEEKA VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein1.8e-3365.89Show/hide
Query:  ASQVGAELLETLGHNCFLYLRVYAIQGLFIEEKKKMEKRSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGG
        A Q GAELLET GHN FLYLR+                                EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPN  GG
Subjt:  ASQVGAELLETLGHNCFLYLRVYAIQGLFIEEKKKMEKRSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGG

Query:  GTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        GTDAPTLSGSG PEV+PTTID+VTKQGLI
Subjt:  GTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein5.2e-3390.8Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        EEQ Q QMM K EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSG+PEV+PTTIDVVTKQGLI
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A6J1C2A9 uncharacterized protein LOC1110076211.6e-2975.76Show/hide
Query:  KMEKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP
        K E+++  + QPQ + M K+ EEKA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPN   GGGGTDAPTLSG+GFPEVKP+TIDV T QGLIP
Subjt:  KMEKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP

A0A6J1FA12 uncharacterized protein LOC1114436391.2e-2980Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        S  E+Q QQQ++ +KEEK  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A6P4D867 uncharacterized protein LOC1074876914.8e-1552.58Show/hide
Query:  KKKMEKRSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGF-PEVKPTTIDVVTKQGL
        K  MEK+  N E+   Q  E  +E +  E+LLP+E SPYVKYKDLE+YKRKGYG EGH EPKP  G G TDAPT SG+    E + +  + V +QG+
Subjt:  KKKMEKRSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGF-PEVKPTTIDVVTKQGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 63.0e-0939.56Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL
        E+Q +    E++ ++   +DL  ++ +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT S     G G      ++ D + +QG+
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL

AT2G23110.2 Late embryogenesis abundant protein, group 63.0e-0939.56Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL
        E+Q +    E++ ++   +DL  ++ +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT S     G G      ++ D + +QG+
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL

AT2G23120.1 Late embryogenesis abundant protein, group 64.3e-0858.62Show/hide
Query:  EKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSG
        EKK E+    D LP + SPY+    LE+YK K YGAEGH EP P  GGG TDAPT SG
Subjt:  EKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 61.0e-1257.14Show/hide
Query:  MEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFP
        M K EEK      LPLE+SPY KY+D+E+YK+  YG  GH + KP HGGG TDAPT SG   P
Subjt:  MEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGATTATTTGATGATTTGTGATTGTGGGGCTCATAGTGGAGATCTAGCGAGTCAAGTGGGAGCTGAACTTTTGGAAACACTTGGTCATAATTGCTTCCTTTA
TTTAAGGGTTTATGCAATACAAGGTCTGTTCATAGAGGAAAAAAAAAAGATGGAGAAAAGGTCGAATAACGAAGAGCAACCACAGCAGCAAATGATGGAGAAGAAAGAAG
AGAAAGCTCCGGTGGAAGATTTGCTGCCATTGGAGAGCAGTCCGTACGTGAAATATAAGGACTTGGAAGAGTATAAAAGGAAAGGATATGGGGCGGAGGGGCATCTTGAG
CCCAAGCCCAATCACGGCGGCGGCGGCACTGACGCACCCACTTTGTCCGGCAGCGGCTTCCCGGAGGTGAAGCCCACCACCATTGACGTCGTCACCAAACAAGGCCTTAT
TCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGATTATTTGATGATTTGTGATTGTGGGGCTCATAGTGGAGATCTAGCGAGTCAAGTGGGAGCTGAACTTTTGGAAACACTTGGTCATAATTGCTTCCTTTA
TTTAAGGGTTTATGCAATACAAGGTCTGTTCATAGAGGAAAAAAAAAAGATGGAGAAAAGGTCGAATAACGAAGAGCAACCACAGCAGCAAATGATGGAGAAGAAAGAAG
AGAAAGCTCCGGTGGAAGATTTGCTGCCATTGGAGAGCAGTCCGTACGTGAAATATAAGGACTTGGAAGAGTATAAAAGGAAAGGATATGGGGCGGAGGGGCATCTTGAG
CCCAAGCCCAATCACGGCGGCGGCGGCACTGACGCACCCACTTTGTCCGGCAGCGGCTTCCCGGAGGTGAAGCCCACCACCATTGACGTCGTCACCAAACAAGGCCTTAT
TCCCTGA
Protein sequenceShow/hide protein sequence
MDFDYLMICDCGAHSGDLASQVGAELLETLGHNCFLYLRVYAIQGLFIEEKKKMEKRSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLE
PKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP