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Lsi04G018330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G018330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA helicase
Genome locationchr04:25458101..25460394
RNA-Seq ExpressionLsi04G018330
SyntenyLsi04G018330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267529.1 unnamed protein product [Prunus armeniaca]6.2e-0889.19Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
        MALMRGEPLV KLAV AKYVVLPGAM AAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
KAE8057437.1 hypothetical protein FH972_014130 [Carpinus fangiana]4.7e-0889.19Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
        MALMRGEPLV+KLA+ AKYVVLPGAM AALVYSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
KAG7024085.1 hypothetical protein SDJN02_12898, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-0887.18Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
        MALMRGEPLVRKLAVFAKY VLP AMAAAL+YSPPDY +
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
KAG7037970.1 hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1094.87Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
        MALM+GEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY Y
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
KGN55532.1 hypothetical protein Csa_011995 [Cucumis sativus]1.6e-0884.62Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
        MALM+GEPL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
TrEMBL top hitse value%identityAlignment
A0A067H074 Uncharacterized protein1.1e-0778.95Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYG
        MA+MRGEPLV KLA  AKYV+LPG+MAAAL+YSPP YG
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYG
A0A0A0L4N8 Uncharacterized protein7.9e-0984.62Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
        MALM+GEPL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
A0A2R6PZ99 DNA helicase1.1e-0779.49Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
        M  MRGEPLV KLAV AKY VLPGAM AAL+YSPPDY Y
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGY
A0A5N6RC88 Uncharacterized protein2.3e-0889.19Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
        MALMRGEPLV+KLA+ AKYVVLPGAM AALVYSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
A0A6J5TUT5 Uncharacterized protein3.0e-0889.19Show/hide
Query:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
        MALMRGEPLV KLAV AKYVVLPGAM AAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGATGAGAGGAGAACCCCTGGTGAGGAAGCTCGCCGTGTTCGCCAAGTACGTTGTTCTTCCGGGAGCCATGGCCGCCGCTCTCGTTTACTCTCCTCCCGATTA
TGGTTACCTTTTTACACTTCATCCTTGTTCTATTCTTTTCCTGAAATGTCGATTCATGATTTTATCCGACTGCTGCATATTTTACGATGTTATATCTGATGGATTTGACC
GTCTGATCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTGATGAGAGGAGAACCCCTGGTGAGGAAGCTCGCCGTGTTCGCCAAGTACGTTGTTCTTCCGGGAGCCATGGCCGCCGCTCTCGTTTACTCTCCTCCCGATTA
TGGTTACCTTTTTACACTTCATCCTTGTTCTATTCTTTTCCTGAAATGTCGATTCATGATTTTATCCGACTGCTGCATATTTTACGATGTTATATCTGATGGATTTGACC
GTCTGATCATGTAGGCTTGGATTTGCAGTGTTGTATTTCTCTTATGTTGATAATGGTGTGTACTGGACTTATTATCATGTCTCAATAACTAGTCCTTTGTTTAACTTTCG
TGCCTTCATCTTGGGAGAAGTAATAACCATTTGTTTCCTTGAAGAATACTCAAAACAGGAAGTATAAATTTTTTTTCCCCTCTTCTCTTTCCCTTGATAAATTTTGAAGT
GTCTCACCATGAGATGGAAGTGAGAACTTTACAGAATACATAACTGTAAATTTCATCTGCTTATATGAAAATTAGAACAGTTATAAAATGCTAGAAATGAAGAATTTCCC
ACGACCCACACCAAAATATGAATATTCACAGTTCACAGTCCTTATAGTACCAACACACAGTCCTTATAGTACCAACACTTTGGTCCTTGCCCACTGTTGAATTGAAATCA
AAATTTCCACTTTTAGGTGACTAGGTGGAGTGTTACAATGACAGAGGATAGAGGTGCTTCAGAGAGATACTTATCTTAGCAAATAATCAAAGCCAGAGTCCCCAACTGGG
TTGGGTGTGTGTTAATAACAGGGGAAGAAGATACTTGGAGCAGACTCTCTGCCATAATATCAACTGAGTAAATTTTAGTTGCTAATTACCAAGCTTGGTTACTGTTCGAT
TTAGTTAAAAAATTTCATAAAATGTTCTTGTTGCAAGTGCCACCATTTCTCTTCAAGTCTCAGGACAATAGTAATTGTAACTGTTATTTAATAAGTAGAGATGACAATAA
CTCTGTCTCTCTAAACAAATCTTTGGCACGACATAAAGGTAGAGGGAACTCAAAGATCAACACATCATGAGAATGACAAGTTCAGAGGAGTAGTTTATCTAACTCTCTCT
TCACTTTCACCTCTTCACCTCACCCAGTGTATGTAAATTTTTTTATTTTGAACTGGAAAATTAGAAAGAAATTGTATACAATGATTGAGGGAAGGGGGTGGGTGGCATGG
AAAGAAGAGGATAATGGACTACACTGCAAACTGTGTCAGGTATTCTTGTGGCCGAATGACTCTGTTTTTTATGAATGGGTTGGGGACAAAACTACAAAGGATTTGGGGTC
CTTTGGCTCACAGTTGATTCAAGATTTTAGAATCCAAACTTGATTTTGATGGCCCCATACCGTACTCGTTTTATTTTGTCATTACTCATGCTGTGAAGTAGATATGTCTG
TTCTCTGATATATACTAATAATAATTCTT
Protein sequenceShow/hide protein sequence
MALMRGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYGYLFTLHPCSILFLKCRFMILSDCCIFYDVISDGFDRLIM