; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G018360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G018360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionplastid transcriptionally active 6
Genome locationchr04:25470595..25475079
RNA-Seq ExpressionLsi04G018360
SyntenyLsi04G018360
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]4.4e-17392.88Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.4e-17293.2Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-AA
        MNSTVFLLSSPLP ATIHRLR PSISA+SSL HLPSLPYR+STPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM DDEMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-AA

Query:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KYIRCA
Subjt:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSF+IIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]1.4e-17493.18Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]4.9e-17291.69Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSPLP  TI+RLR  SIS+++SLPHLPSLPY ++TP A  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIP        KYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]1.2e-17393.18Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSPL  ATI+RLRA SISA+SSLPHLPSLPYR+STPS   LF PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876136.7e-17593.18Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5A7UA32 Uncharacterized protein2.2e-17392.88Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5J5BWI0 Uncharacterized protein1.7e-13373.29Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        M +T+ L   PL        + P ++  +SL   P+L +    P    +F PR + FRV++DDGD D GGPDDYDMD++E+EEVDNKKD+D+EYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ
        AA+A G  G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP        KYIRCA+
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR+RDR+ DLLV+RDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        +R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425727.7e-17192.35Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL---
        MNSTVFLLSSPLP ATIHRLR PSISA+SSL HLPSL YR+STPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM DDEMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL---

Query:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIR
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KYIR
Subjt:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSF+II
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770761.5e-17192.4Show/hide
Query:  MNSTVFLLSS--PLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-
        MNSTVFLLSS  PLP ATIHRLR PSISA+SSLPHLPSLPYR+STPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM DDEMEEVDNKKDFDIEYD L 
Subjt:  MNSTVFLLSS--PLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-

Query:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KY
          AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP        KY
Subjt:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFR
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSF+
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFR

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic3.2e-12672Show/hide
Query:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDD+E+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP        KYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SF+IIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 62.3e-12772Show/hide
Query:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDD+E+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP        KYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SF+IIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF

AT1G21600.2 plastid transcriptionally active 62.3e-12772Show/hide
Query:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDD+E+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP        KYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIP--------KYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SF+IIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAATATTTTTTTCTTTTCTTTTTAACATTATCCACCTGACAAACTTCGAATTCTCCGGCGGCCGCTTCACAGAGTTGGCGACCCCAGTGCCAATTCTCCCCAT
GAACTCCACCGTCTTCCTTCTTTCATCGCCCTTGCCGGCGGCCACAATCCACCGGCTCCGAGCCCCCTCCATCTCCGCCTCAAGCTCTCTCCCCCACCTCCCGAGCCTGC
CCTACCGGCAATCCACTCCCTCTGCTCCCACTCTCTTCGTCCCTAGAAAAAATCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGCGGCCCCGATGACTAC
GACATGGACGACGACGAAATGGAGGAAGTGGACAACAAGAAGGATTTCGACATCGAGTACGATCCTCTAGCCGCGGCCGCAGCTGCGGCAGCGGGTTCCGACGGCGTTGG
CGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACACAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAAGATTA
GTCTGTTGCACTGTGATTTCTTCATCAGAAAGCCGCCGGATCCTGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCCGACACTGATGTCTATGCCATA
CCCAAATATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCACTATACAAGTCCGAAAAGGAGGTTCTTAA
GGTTTTCTTGACAAAGCACTTTAGAAACCGAAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACCAAGTCAATCACCAGGG
CAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGGGATAATGGGAACTCTTTCAGGATCATCCATTCGAGCGAACGA
GATGATCCGACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGACTTTAGCATTTCAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAATATTTTTTTCTTTTCTTTTTAACATTATCCACCTGACAAACTTCGAATTCTCCGGCGGCCGCTTCACAGAGTTGGCGACCCCAGTGCCAATTCTCCCCAT
GAACTCCACCGTCTTCCTTCTTTCATCGCCCTTGCCGGCGGCCACAATCCACCGGCTCCGAGCCCCCTCCATCTCCGCCTCAAGCTCTCTCCCCCACCTCCCGAGCCTGC
CCTACCGGCAATCCACTCCCTCTGCTCCCACTCTCTTCGTCCCTAGAAAAAATCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGCGGCCCCGATGACTAC
GACATGGACGACGACGAAATGGAGGAAGTGGACAACAAGAAGGATTTCGACATCGAGTACGATCCTCTAGCCGCGGCCGCAGCTGCGGCAGCGGGTTCCGACGGCGTTGG
CGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACACAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAAGATTA
GTCTGTTGCACTGTGATTTCTTCATCAGAAAGCCGCCGGATCCTGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCCGACACTGATGTCTATGCCATA
CCCAAATATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCACTATACAAGTCCGAAAAGGAGGTTCTTAA
GGTTTTCTTGACAAAGCACTTTAGAAACCGAAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACCAAGTCAATCACCAGGG
CAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGGGATAATGGGAACTCTTTCAGGATCATCCATTCGAGCGAACGA
GATGATCCGACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGACTTTAGCATTTCAAATTGGTTTTAAAC
CATTCAACCTGCAAAAGTCGTCCTCAAGATCCTTATCTGTTTAGAAGTGAGGACAGGAAATGTGGTTTCAAAGTTTACGCATTGACGTGAATGAGACACCCAACTTACCC
ATCACGATGATTCTTCTCGTGCGAGTTCTTTGACATATCTCCTCCCCATGCTCCAGGATCGGTATTGAGTTTAATTATGGCTAGCTTACACTTGCAATGATTGATCTTTC
TGATTCATTCTACTCGCTTTCAGTTTTCGCCACGAGATAAGAGTTGTTAGTCTAGGAAAGGTAGTTTTTTGTAGATTTGTAATGCTGGGAGAATTCACAAAAAGCAAAAA
CAGTTGCATCTCTTGGCTGTTTTCTGCTGTTGTTGTTATATACTAACCATTGTAAGAAAGTTTTGAAGACCTGTGCTGTATGAGGTTAGAATTGCTGTGAATTGATATGC
AATATGAATCAAATAAAAAACAAAACAAAACCGTTCATTGGCTTCTAGCTT
Protein sequenceShow/hide protein sequence
MIEIFFSFLFNIIHLTNFEFSGGRFTELATPVPILPMNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDY
DMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAI
PKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSER
DDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF