CuGenDBv2

Gene ID	Lsi04G018440
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box protein SKIP31-like
Genome location	chr04:25558062..25562181
RNA-Seq Expression	Lsi04G018440
Synteny	Lsi04G018440
Gene Ontology terms	GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0042981 - regulation of apoptotic process (biological process) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008444220.1 PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo]

3.1e-173

94.69

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAIPDE+DEFLAQFLESEVLSEVSDKEEGN QEEPKPKRARIEQI+PNEQREV S T+SSSQS+GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LPT+KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA
        KSSRGLTDKIV+DHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVC ISGHCFD+LLLPD+MEPDTEQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA

Query:  RAYLLGYNCVDEAELEATLR
        RAYLLGYNC DEAELEATLR
Subjt:  RAYLLGYNCVDEAELEATLR

XP_008444221.1 PREDICTED: F-box protein SKIP31 isoform X2 [Cucumis melo]

8.5e-171

94.06

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAIPDE+DEFLAQFLESEVLSEVSDKEEGN QEEPKPKRARIEQI+PNEQREV S T+SSSQS+GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LPT+KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS  QDDQIILDRTMADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA
        KSSRGLTDKIV+DHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVC ISGHCFD+LLLPD+MEPDTEQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA

Query:  RAYLLGYNCVDEAELEATLR
        RAYLLGYNC DEAELEATLR
Subjt:  RAYLLGYNCVDEAELEATLR

XP_011653768.1 F-box protein SKIP31 isoform X1 [Cucumis sativus]

1.8e-173

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Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAIPDE+DEFLAQFLESEVLSEVSDKEEGN QEEPKPKRARIEQI+PNEQREV S T+SSSQS+GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LP TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA
        KSSRGLTDKIV+DHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVC ISGHCFDTLLLPD+MEPDTEQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA

Query:  RAYLLGYNCVDEAELEATLR
        RAYLLGYNC DEAELEATLR
Subjt:  RAYLLGYNCVDEAELEATLR

XP_038896910.1 F-box protein SKIP31 isoform X1 [Benincasa hispida]

5.1e-176

96.88

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPK KRARIEQI+PNEQREV S T SSSQS+GVVPGRIETGIFSKIPPELFRHILKFLSSEDL+SCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNSVASDESLW RLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA
        KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQ GVTDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA

Query:  RAYLLGYNCVDEAELEATLR
        RAYLLGYNCVDEAELEATLR
Subjt:  RAYLLGYNCVDEAELEATLR

XP_038896911.1 F-box protein SKIP31 isoform X2 [Benincasa hispida]

2.4e-173

96.25

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPK KRARIEQI+PNEQREV S T SSSQS+GVVPGRIETGIFSKIPPELFRHILKFLSSEDL+SCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNSVASDESLW RLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA
        KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDT  QQ GVTDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA

Query:  RAYLLGYNCVDEAELEATLR
        RAYLLGYNCVDEAELEATLR
Subjt:  RAYLLGYNCVDEAELEATLR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9V0 F-box protein SKIP31 isoform X1

1.5e-173

94.69

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAIPDE+DEFLAQFLESEVLSEVSDKEEGN QEEPKPKRARIEQI+PNEQREV S T+SSSQS+GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LPT+KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA
        KSSRGLTDKIV+DHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVC ISGHCFD+LLLPD+MEPDTEQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA

Query:  RAYLLGYNCVDEAELEATLR
        RAYLLGYNC DEAELEATLR
Subjt:  RAYLLGYNCVDEAELEATLR

A0A1S3B9Y3 F-box protein SKIP31 isoform X2

4.1e-171

94.06

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAIPDE+DEFLAQFLESEVLSEVSDKEEGN QEEPKPKRARIEQI+PNEQREV S T+SSSQS+GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LPT+KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS  QDDQIILDRTMADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA
        KSSRGLTDKIV+DHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVC ISGHCFD+LLLPD+MEPDTEQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFA

Query:  RAYLLGYNCVDEAELEATLR
        RAYLLGYNC DEAELEATLR
Subjt:  RAYLLGYNCVDEAELEATLR

A0A6J1F8E8 F-box protein SKIP31-like

2.7e-170

93.79

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        MAI DEEDE LAQFLE+EVLSEVSDKEEGNAQEEP+PKRARIEQINPNEQREVAS TTSSSQ  GVVPGRI+TGIFS+IP ELFRHILKFLSSEDLISCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVCRFLNSVASDESLWRRLYCLRWGL+P TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEA--EPFMGSGR
        KSSRGLTDKIVIDHTCSGETCTYYQ+GDAFVCEKTGLVHVCDDTCREV+MDPNDEQLVCRISGHCFDTLL PDSMEPDTE QQAGVTDEA  EPFMGSGR
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEA--EPFMGSGR

Query:  FARAYLLGYNCVDEAELEATLR
        FARAYLLGYNC DEAELEATLR
Subjt:  FARAYLLGYNCVDEAELEATLR

A0A6J1FLL4 F-box protein SKIP31-like

1.1e-168

92.28

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSS--SQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLIS
        M+IPDEEDEFLAQF+ESEVLSEVSDKEEGN +EEPKPKRARIEQINPNEQREVAS TTSS  SQS+GVVPGRIETGIFSK+PPELFRHILKFLSSEDL+S
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSS--SQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLIS

Query:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVS
        CSLVCRFLNSVASDESLWRRLYCLRWGL+P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVS
Subjt:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVS

Query:  TWKSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTD--EAEPFMGS
        +WKSS+GL DKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDP+DEQLVCRISGHCFD LLLPDS EPD+EQQ AGVTD  EAEPFMGS
Subjt:  TWKSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTD--EAEPFMGS

Query:  GRFARAYLLGYNCVDEAELEATLR
        GRFARAYLLGYNC DEAELEATLR
Subjt:  GRFARAYLLGYNCVDEAELEATLR

A0A6J1ISU8 F-box protein SKIP31-like

9.5e-168

91.98

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATT--SSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLIS
        M+IPDEEDEFLAQF+ESEVLSEVSDKEEGN +EEPKPKRARIEQINPNEQREVAS TT  S SQS+GVVPGRIETGIFSK+P ELFRHILKFLSSEDL+S
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATT--SSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLIS

Query:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVS
        CSLVCRFLNSVASDESLWRRLYCLRWGL+P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVS
Subjt:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVS

Query:  TWKSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTD--EAEPFMGS
        +WKSS+GL DKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDP+DEQLVCRISGHCFD LLLPDSMEPD+EQQ AGVTD  EAEPFMGS
Subjt:  TWKSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTD--EAEPFMGS

Query:  GRFARAYLLGYNCVDEAELEATLR
        GRFARAYLLGYNC DEAELEATLR
Subjt:  GRFARAYLLGYNCVDEAELEATLR

SwissProt top hits

e value

%identity

Alignment

Q9FHK0 F-box protein SKIP31

1.1e-96

57.89

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        M++ DEEDE  A+FLESEV S V DKEE    +EP+ KR RIE+    +  E       +         RIE+G+F+ +P ELFRHILKFLSSEDL+SCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVC+FLN  A+DESLWRRLYC+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRSQAPLPSQ+ DD+IILD T+ +QVS W
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTE---QQQAGVTDEAEPFMGSG
        K S+GLTDK V  H C G  C+Y+QI D F+C++TG VHVCDD C+EVI+ P  + +VC ISG C DTLL+    EPD +   +++A +  EAE F    
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTE---QQQAGVTDEAEPFMGSG

Query:  RFARAYLLGYNCVDEAELEATLR
        R ARA+ LGYNC DE ELE TLR
Subjt:  RFARAYLLGYNCVDEAELEATLR

Arabidopsis top hits

e value

%identity

Alignment

AT5G45360.1 F-box family protein

7.8e-98

57.89

Show/hide

Query:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS
        M++ DEEDE  A+FLESEV S V DKEE    +EP+ KR RIE+    +  E       +         RIE+G+F+ +P ELFRHILKFLSSEDL+SCS
Subjt:  MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW
        LVC+FLN  A+DESLWRRLYC+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRSQAPLPSQ+ DD+IILD T+ +QVS W
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTW

Query:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTE---QQQAGVTDEAEPFMGSG
        K S+GLTDK V  H C G  C+Y+QI D F+C++TG VHVCDD C+EVI+ P  + +VC ISG C DTLL+    EPD +   +++A +  EAE F    
Subjt:  KSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTE---QQQAGVTDEAEPFMGSG

Query:  RFARAYLLGYNCVDEAELEATLR
        R ARA+ LGYNC DE ELE TLR
Subjt:  RFARAYLLGYNCVDEAELEATLR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCATTCCAGATGAAGAAGACGAGTTCTTGGCTCAATTTCTTGAATCAGAGGTTCTCTCGGAGGTCTCCGACAAGGAAGAGGGGAACGCGCAGGAGGAACCAAAACC
TAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTAGCTTCCGCTACTACTTCGTCCTCTCAATCCAGGGGCGTCGTTCCCGGGAGGATTGAGACTG
GAATTTTCAGTAAAATTCCTCCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCATTGGTTTGTCGGTTTTTAAATTCTGTGGCC
TCTGATGAATCATTATGGCGCAGATTGTATTGTCTGCGTTGGGGTCTGTTGCCCACGACCAAGAAGTTGCGCCAATGTCCATGGAAAAAACTTTATATTCAGCGTGACGA
GGAAGATATGACTCAACTGGTTCGAGATTGCTCTTCTGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCGAAAAGGAGTCAAGCTCCTCTACCTTCTCAGGTGCAGG
ACGACCAAATAATTCTTGATAGGACCATGGCTGATCAAGTATCTACATGGAAAAGCAGCAGGGGCTTGACTGACAAGATAGTCATAGATCACACTTGTTCTGGAGAAACA
TGTACATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACTTGCAGAGAAGTCATTATGGATCCCAATGATGAACAACT
TGTCTGCAGAATATCTGGACACTGCTTTGATACTCTACTTTTGCCAGATTCTATGGAACCGGATACTGAACAGCAACAAGCCGGTGTAACCGATGAGGCAGAACCATTCA
TGGGTTCAGGCCGTTTTGCTCGAGCTTACTTGTTGGGGTACAATTGTGTTGACGAGGCAGAGCTAGAAGCCACTTTGAGGGCTTATATTAGTGATCTTCATTTCGTGTAC
AAGTTTGTTAATTAG

mRNA sequence

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TGGTTCCTGTGATTTCGGGTGAGTTATTGGGGGTTGGTCGTCATTCTAAAGGCCGGAACTGCCGGCTGCCAGCTCCGGTCACCGGCCGACGGAGATTATTTATCGGCCTA
TTCACAATCGATCGTTCTAGGAGTTCGAAAATCCCATCGCTTGATGTGAAATGGCCATTCCAGATGAAGAAGACGAGTTCTTGGCTCAATTTCTTGAATCAGAGGTTCTC
TCGGAGGTCTCCGACAAGGAAGAGGGGAACGCGCAGGAGGAACCAAAACCTAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTAGCTTCCGCTAC
TACTTCGTCCTCTCAATCCAGGGGCGTCGTTCCCGGGAGGATTGAGACTGGAATTTTCAGTAAAATTCCTCCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAG
AGGATCTGATTTCTTGTTCATTGGTTTGTCGGTTTTTAAATTCTGTGGCCTCTGATGAATCATTATGGCGCAGATTGTATTGTCTGCGTTGGGGTCTGTTGCCCACGACC
AAGAAGTTGCGCCAATGTCCATGGAAAAAACTTTATATTCAGCGTGACGAGGAAGATATGACTCAACTGGTTCGAGATTGCTCTTCTGAGTTTAAAGAGTACTACATCCA
AATGCAAGCAGCGAAAAGGAGTCAAGCTCCTCTACCTTCTCAGGTGCAGGACGACCAAATAATTCTTGATAGGACCATGGCTGATCAAGTATCTACATGGAAAAGCAGCA
GGGGCTTGACTGACAAGATAGTCATAGATCACACTTGTTCTGGAGAAACATGTACATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTA
TGTGATGACACTTGCAGAGAAGTCATTATGGATCCCAATGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACTCTACTTTTGCCAGATTCTATGGAACC
GGATACTGAACAGCAACAAGCCGGTGTAACCGATGAGGCAGAACCATTCATGGGTTCAGGCCGTTTTGCTCGAGCTTACTTGTTGGGGTACAATTGTGTTGACGAGGCAG
AGCTAGAAGCCACTTTGAGGGCTTATATTAGTGATCTTCATTTCGTGTACAAGTTTGTTAATTAG

Protein sequence

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MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKPKRARIEQINPNEQREVASATTSSSQSRGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVA
SDESLWRRLYCLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTMADQVSTWKSSRGLTDKIVIDHTCSGET
CTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQAGVTDEAEPFMGSGRFARAYLLGYNCVDEAELEATLRAYISDLHFVY
KFVN

Lsi04G018440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome