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Lsi04G018590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G018590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAt4g19430
Genome locationchr04:25717399..25717788
RNA-Seq ExpressionLsi04G018590
SyntenyLsi04G018590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052276.1 hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]7.3e-4676.15Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKK +K +K+E+ KRE NG+Y+YKEVS++ + GDSKG RRRRRRKKGQFGT  +VL +N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM
        DERM      SIDPYFSMPVLPYTTMANC+
Subjt:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM

KAG6608012.1 hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4066.91Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVS--ESEKLGDSKGRRR-----RRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNEC
        MSVS Q+LGL  L+KKEKK  ++E L+RE  GH++  +    ESE+ GD KGRRR     RRRK  QFG A +VL+ N+WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVS--ESEKLGDSKGRRR-----RRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNEC

Query:  CCDAYEDERMKKIEVTSIDPYFSMPVLPYTTMANCM
        CCDAYEDERMK++EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDERMKKIEVTSIDPYFSMPVLPYTTMANCM

KGN55571.1 hypothetical protein Csa_012627 [Cucumis sativus]6.4e-5080Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKGRRRR-RRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MSVSTQLL LG LEKK KK +K+E+LKRE+NG+Y+YK+VS++E+ G+SKGRRRR RRKKGQFGT  +VL +N WYFTSTISHILRKAKAFYNECCCDA+E
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKGRRRR-RRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM
        DERMKK EV SIDPYFSMPVLPYTTMANCM
Subjt:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM

TYK01842.1 hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]9.6e-4676.15Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKK +K +K+E+ KRE NG+Y+YKEVS++ + GDSKG RRRRRRKKGQFGT  +VL +N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM
        DERM      SIDPYFSMPVLPYTTMANC+
Subjt:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM

XP_022940822.1 uncharacterized protein LOC111446301 [Cucurbita moschata]4.6e-4066.91Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVS--ESEKLGDSKGRRR-----RRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNEC
        MSVS Q+LGL  L+KKEKK  ++E L+RE  GH++  +    ESE+ GD KGRRR     RRRK  QFG A +VL+ N+WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVS--ESEKLGDSKGRRR-----RRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNEC

Query:  CCDAYEDERMKKIEVTSIDPYFSMPVLPYTTMANCM
        CCDAYEDERMK++EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDERMKKIEVTSIDPYFSMPVLPYTTMANCM

TrEMBL top hitse value%identityAlignment
A0A0A0L609 Uncharacterized protein3.1e-5080Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKGRRRR-RRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MSVSTQLL LG LEKK KK +K+E+LKRE+NG+Y+YK+VS++E+ G+SKGRRRR RRKKGQFGT  +VL +N WYFTSTISHILRKAKAFYNECCCDA+E
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKGRRRR-RRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM
        DERMKK EV SIDPYFSMPVLPYTTMANCM
Subjt:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM

A0A1Q3D8H6 Uncharacterized protein (Fragment)2.0e-1244.86Show/hide
Query:  KENLKRESNGHYAYKEVSESEKLGDSKGRRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVTSIDPYFSMPVLPY
        + N+K ES     + E    E +G+      R++K G +  A +  RL +WY TS+IS+ILRKAKAFYNECCCDA+ED  +   +VT +D YFS PV+P 
Subjt:  KENLKRESNGHYAYKEVSESEKLGDSKGRRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVTSIDPYFSMPVLPY

Query:  TTMANCM
         T++  M
Subjt:  TTMANCM

A0A5A7UDK1 Uncharacterized protein3.5e-4676.15Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKK +K +K+E+ KRE NG+Y+YKEVS++ + GDSKG RRRRRRKKGQFGT  +VL +N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM
        DERM      SIDPYFSMPVLPYTTMANC+
Subjt:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM

A0A5D3BSQ8 Uncharacterized protein4.6e-4676.15Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE
        MS+STQLLGLG LEKK +K +K+E+ KRE NG+Y+YKEVS++ + GDSKG RRRRRRKKGQFGT  +VL +N WYFTSTISHILRKAKAFYNECCCDAYE
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKG-RRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYE

Query:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM
        DERM      SIDPYFSMPVLPYTTMANC+
Subjt:  DERMKKIEVTSIDPYFSMPVLPYTTMANCM

A0A6J1FKP2 uncharacterized protein LOC1114463012.2e-4066.91Show/hide
Query:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVS--ESEKLGDSKGRRR-----RRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNEC
        MSVS Q+LGL  L+KKEKK  ++E L+RE  GH++  +    ESE+ GD KGRRR     RRRK  QFG A +VL+ N+WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVS--ESEKLGDSKGRRR-----RRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNEC

Query:  CCDAYEDERMKKIEVTSIDPYFSMPVLPYTTMANCM
        CCDAYEDERMK++EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDERMKKIEVTSIDPYFSMPVLPYTTMANCM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19430.1 unknown protein4.5e-0936.19Show/hide
Query:  EKKSLKKENLKRESNGHYAYKEVSESEKLGDSKGRRRRRRKKGQFGTASEVLRLN-LWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVTSIDPYF
        E  S+K+E   ++ +G           K+ +  G+     K G      +V RL+ LWY   +ISHILRKA+AFYNE CCD Y +     +    ++PYF
Subjt:  EKKSLKKENLKRESNGHYAYKEVSESEKLGDSKGRRRRRRKKGQFGTASEVLRLN-LWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVTSIDPYF

Query:  SMPVL
        S+PV+
Subjt:  SMPVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGAGAAAAAGAGCCTCAAGAAAGAGAATTTAAAGAGAGAAAGCAATGGCCATTATGCATACAA
GGAAGTGAGTGAAAGTGAGAAGCTTGGAGATAGCAAAGGAAGAAGAAGAAGAAGAAGAAAGAAGGGTCAGTTTGGGACTGCAAGTGAAGTTCTTCGCTTGAATTTGTGGT
ACTTTACTTCAACAATTAGCCATATATTAAGGAAGGCCAAAGCCTTTTACAATGAATGTTGCTGTGATGCCTATGAAGATGAGAGGATGAAGAAGATTGAAGTGACTTCT
ATTGATCCTTATTTCTCAATGCCTGTGTTGCCTTATACTACTATGGCTAATTGTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGAGAAAAAGAGCCTCAAGAAAGAGAATTTAAAGAGAGAAAGCAATGGCCATTATGCATACAA
GGAAGTGAGTGAAAGTGAGAAGCTTGGAGATAGCAAAGGAAGAAGAAGAAGAAGAAGAAAGAAGGGTCAGTTTGGGACTGCAAGTGAAGTTCTTCGCTTGAATTTGTGGT
ACTTTACTTCAACAATTAGCCATATATTAAGGAAGGCCAAAGCCTTTTACAATGAATGTTGCTGTGATGCCTATGAAGATGAGAGGATGAAGAAGATTGAAGTGACTTCT
ATTGATCCTTATTTCTCAATGCCTGTGTTGCCTTATACTACTATGGCTAATTGTATGTAA
Protein sequenceShow/hide protein sequence
MSVSTQLLGLGGLEKKEKKSLKKENLKRESNGHYAYKEVSESEKLGDSKGRRRRRRKKGQFGTASEVLRLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVTS
IDPYFSMPVLPYTTMANCM