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Lsi04G018770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G018770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive family protein
Genome locationchr04:25910545..25911069
RNA-Seq ExpressionLsi04G018770
SyntenyLsi04G018770
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-5270.69Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCER +EE EE EE++    H         ++++  E+VSG+NVI+YVGSTRKRY ISSKYLS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS

Query:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        HPLLNALI KSK  K          +EDDD++  CISVRCEVVLFDHLLWMLENSDPNI FDSN EELAELYVF
Subjt:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

XP_008444291.1 PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]1.7e-5370.86Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSG-NNVILYVGSTRKRYAISSKYL
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+    +EE+ E+ FD                  +KVSG NNV+LYVGSTRK+YAI+SKYL
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSG-NNVILYVGSTRKRYAISSKYL

Query:  SHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
         HPLLNALI KSKSKKL ++++D+  + DD +++DCI VRCEVVLFDHLLWMLENSDPNITFDSN EELAELYVF
Subjt:  SHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]6.8e-5573.56Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+        +E+DF              +QQ  +KVSG+NVILYVGSTRK+YAI+SKYLS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS

Query:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        HPLLNALI KSKSKKL ++++DDD+  +DDEE  CI VRCEVVLFDHLLWMLENSDPNITFDSN EELAELYVF
Subjt:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]8.3e-5372.99Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC+R +EE EE EE        H+++++H    +  EKVSG+NVI+YVGSTRKRYAISSKYLS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS

Query:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        HPLLNALI KSK  K   NN DDD        D+CISVRCEVVLFDHLLWMLENSDPNI FDSN EELAELYVF
Subjt:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]4.3e-5776.44Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS
        MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC  K+EEE+ E                  QQ+QQ+EKVSGN+VILYVGSTRKRYAISSKYLS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS

Query:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        HPLLNALI KSKSKKL  N        DDDEE+DCISVRCEVVLFDHLLWMLENSDPNI+FDSN EELAELYVF
Subjt:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A1S3B9J9 uncharacterized protein LOC1034876598.1e-5470.86Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSG-NNVILYVGSTRKRYAISSKYL
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+    +EE+ E+ FD                  +KVSG NNV+LYVGSTRK+YAI+SKYL
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSG-NNVILYVGSTRKRYAISSKYL

Query:  SHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
         HPLLNALI KSKSKKL ++++D+  + DD +++DCI VRCEVVLFDHLLWMLENSDPNITFDSN EELAELYVF
Subjt:  SHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073987.1e-5069.71Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYL
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C  K+EEEEEEEE                 QQQQ+EKV G+NVI+YVGSTRK+Y ISSK+L
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYL

Query:  SHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        SHPL+NALI KSKSK            +   E+ + ISVRCEVVLFDHLLWMLENSDPNITFDSN EELA+LYVF
Subjt:  SHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

A0A6M2F6T8 Uncharacterized protein1.3e-3253.45Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS
        MKKI+ +LRKCKSLSRQLGRSSSYSSLRSKSTREDLW                    H H+Q+ +             N+  ++VGSTRKRY ISSKYLS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS

Query:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        HPL+NALI KSK K                 ED  ++VRCEVV FDHLLWMLEN+DP++ F S  EELA+LY+F
Subjt:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

B9GK00 Uncharacterized protein5.1e-3253.45Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS
        MKKI+ +LRKCKSLSRQLGRSSSYSSLRSKSTREDLW                     HH  +Q+ +           N+  ++VGSTRKRY ISSKYLS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS

Query:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        HPL+NALI KSK K                 ED  + VRCEVV FDHLLWMLEN+DP++ F S  EELA+LY+F
Subjt:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

B9RI47 Uncharacterized protein6.1e-3354.02Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW                     H ++ ++HQ               L+VGSTRKRY ISSKYLS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLS

Query:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF
        HPL+NALI KSK +                + ++ + V+CEVVLFDHLLWMLEN+DPN++FDS  EELAELYVF
Subjt:  HPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR765.9e-0942.22Show/hide
Query:  LYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELY
        +YVG TR+ Y +SS  +SHPL   L                  D     ED  ISV CEVVLF+HLLWMLEN+D + +   +  EL E Y
Subjt:  LYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELY

Q9C9E1 Auxin-responsive protein SAUR781.9e-0733.06Show/hide
Query:  FDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLE
        F   HHH         +   +    N  ++YVG TR+ Y +    +SHPL   L+ +S S+ +              E+D  I V CEVVLF+HLLWML+
Subjt:  FDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLE

Query:  NSDPNITFDSNFEELAELYVF
        +         + EELAE Y +
Subjt:  NSDPNITFDSNFEELAELYVF

Q9LQI6 Auxin-responsive protein SAUR776.1e-0632.79Show/hide
Query:  HHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENS--
        +HH           +V K    +V+ YVG +R+ Y +SS  ++HPL   L+   +S +     +D +           + V CEVVLF+HLLWML+NS  
Subjt:  HHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENS--

Query:  ---DPNITFDSNFEELAELYVF
           D +     + EELAE Y +
Subjt:  ---DPNITFDSNFEELAELYVF

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family4.3e-0732.79Show/hide
Query:  HHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENS--
        +HH           +V K    +V+ YVG +R+ Y +SS  ++HPL   L+   +S +     +D +           + V CEVVLF+HLLWML+NS  
Subjt:  HHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENS--

Query:  ---DPNITFDSNFEELAELYVF
           D +     + EELAE Y +
Subjt:  ---DPNITFDSNFEELAELYVF

AT1G72430.1 SAUR-like auxin-responsive protein family1.3e-0833.06Show/hide
Query:  FDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLE
        F   HHH         +   +    N  ++YVG TR+ Y +    +SHPL   L+ +S S+ +              E+D  I V CEVVLF+HLLWML+
Subjt:  FDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLE

Query:  NSDPNITFDSNFEELAELYVF
        +         + EELAE Y +
Subjt:  NSDPNITFDSNFEELAELYVF

AT3G12955.1 SAUR-like auxin-responsive protein family1.4e-1840.12Show/hide
Query:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHP
        ++  +LR+CKS+S QLGRS SY+SLRSKS R D                            Q H Q   Q    S    +L VG T+K Y IS K+L HP
Subjt:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHP

Query:  LLNALIHKSKSKKLANNNNDDDNDEDDDEEDDC-ISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYV
        LLNAL+ K +             +EDD+E+  C I+V+CEVVLFDHLLWMLE  D  +    + ++ A LY+
Subjt:  LLNALIHKSKSKKLANNNNDDDNDEDDDEEDDC-ISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYV

AT5G20820.1 SAUR-like auxin-responsive protein family4.2e-1042.22Show/hide
Query:  LYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELY
        +YVG TR+ Y +SS  +SHPL   L                  D     ED  ISV CEVVLF+HLLWMLEN+D + +   +  EL E Y
Subjt:  LYVGSTRKRYAISSKYLSHPLLNALIHKSKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAATTAGGAAGATCCTCTTCTTATAGTAGCTTGAGATCAAAATCCACAAGAGAAGATCTTTG
GGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGAAGAAGAAGAAAAAGATTTCGATAATATTCATCATCATCAGCAGCAACAGCAACATCAACAGCAACAGCAGCAGGTTG
AAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGAAGCACAAGGAAGAGATATGCAATAAGTTCAAAATATTTGAGCCATCCTTTGCTAAATGCTCTTATTCACAAA
TCCAAGTCTAAGAAATTAGCTAATAATAATAATGATGATGATAATGATGAAGATGATGATGAAGAAGATGATTGCATTTCAGTCAGATGTGAAGTTGTTCTATTTGATCA
TCTCTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTTCGAGGAATTGGCTGAACTTTATGTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAATTAGGAAGATCCTCTTCTTATAGTAGCTTGAGATCAAAATCCACAAGAGAAGATCTTTG
GGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGAAGAAGAAGAAAAAGATTTCGATAATATTCATCATCATCAGCAGCAACAGCAACATCAACAGCAACAGCAGCAGGTTG
AAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGAAGCACAAGGAAGAGATATGCAATAAGTTCAAAATATTTGAGCCATCCTTTGCTAAATGCTCTTATTCACAAA
TCCAAGTCTAAGAAATTAGCTAATAATAATAATGATGATGATAATGATGAAGATGATGATGAAGAAGATGATTGCATTTCAGTCAGATGTGAAGTTGTTCTATTTGATCA
TCTCTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTTCGAGGAATTGGCTGAACTTTATGTTTTTTGA
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERKLEEEEEEEEKDFDNIHHHQQQQQHQQQQQQVEKVSGNNVILYVGSTRKRYAISSKYLSHPLLNALIHK
SKSKKLANNNNDDDNDEDDDEEDDCISVRCEVVLFDHLLWMLENSDPNITFDSNFEELAELYVF