; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G019320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCysteine/Histidine-rich C1 domain family protein
Genome locationchr04:26499067..26505869
RNA-Seq ExpressionLsi04G019320
SyntenyLsi04G019320
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3504933.1 unnamed protein product [Digitaria exilis]1.2e-1445.14Show/hide
Query:  ALEDPPTIILSLLSLPFALTFFLISLPSS--PINFLIPLSISSALTTLDLSIWKSFISTLNPNSTTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCD
        A +DPP+      +   A  F L  LPSS  PI  L   S S+A T     +  S + T  P + TI+NAL CCSAYIGH A+GTP H LS  EF PQC 
Subjt:  ALEDPPTIILSLLSLPFALTFFLISLPSS--PINFLIPLSISSALTTLDLSIWKSFISTLNPNSTTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCD

Query:  INPPVAGWANISICGA----------HPMTLPISAVRSRNPSGR
         NPP A  A IS CGA           P +L      SRNPSGR
Subjt:  INPPVAGWANISICGA----------HPMTLPISAVRSRNPSGR

EYU42868.1 hypothetical protein MIMGU_mgv1a019797mg [Erythranthe guttata]8.9e-1857.78Show/hide
Query:  SNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIAGWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV
        S +IS+A P+S T  NA +CCSA IG VAIGTP  TLS IEF PQC+T PP AG  + + C  HP+TFPI +V  RNPSG+TS    +SV
Subjt:  SNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIAGWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV

GAV69189.1 hypothetical protein CFOL_v3_12690, partial [Cephalotus follicularis]3.7e-1646.21Show/hide
Query:  EDPPTIILSLLSLPFALTFFLISLPSSPINFLIPLSISSALTTLDLSIWKSFISTLNPNSTTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCDINPP
        E+PP++  S      +LT  LI  PSS    L+ +   S+L T+     + F  T  P+S+  S A N CSAY GH  IGTP  TLS+ EF PQCD NPP
Subjt:  EDPPTIILSLLSLPFALTFFLISLPSSPINFLIPLSISSALTTLDLSIWKSFISTLNPNSTTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCDINPP

Query:  VAGWANISICGAHP-MTLPISAVRSRNPSGRI
          GW  IS CGA    T P   VR RNPSGR+
Subjt:  VAGWANISICGAHP-MTLPISAVRSRNPSGRI

GER33597.1 cysteine/Histidine-rich C1 domain family protein, partial [Striga asiatica]4.4e-1745.26Show/hide
Query:  LLSSLFAFTFFLSSLLS--SPINFFIPIFISPALTNLGLSSPKVIRYSNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIA
        + S LF F  F  SL +   PI+      IS A T  G  SP            + +S T  NA  CCSA  G  A GTPYH LSS EF PQC+  PP A
Subjt:  LLSSLFAFTFFLSSLLS--SPINFFIPIFISPALTNLGLSSPKVIRYSNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIA

Query:  GWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV
         W + + C  HP+TFPI  VR +NPSG+TS  SV+SV
Subjt:  GWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV

KAB8105522.1 hypothetical protein EE612_039441 [Oryza sativa]9.8e-1765.28Show/hide
Query:  STTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCDINPPVAGWANISICGAH-PMTLPISAVRSRNPSGR
        S T SNA  CCSAY GH AIGTPCH LS+ EF P C   PP+AGWA IS CGAH   T+P+  V SRNPSGR
Subjt:  STTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCDINPPVAGWANISICGAH-PMTLPISAVRSRNPSGR

TrEMBL top hitse value%identityAlignment
A0A022RSY4 Uncharacterized protein4.3e-1857.78Show/hide
Query:  SNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIAGWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV
        S +IS+A P+S T  NA +CCSA IG VAIGTP  TLS IEF PQC+T PP AG  + + C  HP+TFPI +V  RNPSG+TS    +SV
Subjt:  SNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIAGWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV

A0A0P0X749 Os07g0503200 protein4.8e-1765.28Show/hide
Query:  STTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCDINPPVAGWANISICGAH-PMTLPISAVRSRNPSGR
        S T SNA  CCSAY GH AIGTPCH LS+ EF P C   PP+AGWA IS CGAH   T+P+  V SRNPSGR
Subjt:  STTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCDINPPVAGWANISICGAH-PMTLPISAVRSRNPSGR

A0A251VBU2 Uncharacterized protein1.9e-2146.26Show/hide
Query:  ISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIAGWANISACDVHPMTFPILVVRLRNPS--------GKTSLMSVFSVLRTYP
        +STANP+STTISNAL+CCSA IGH A+GTP H LSSIEF PQ DTNPP A  A+   C  HP+TFPIL      P         G  +      ++    
Subjt:  ISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIAGWANISACDVHPMTFPILVVRLRNPS--------GKTSLMSVFSVLRTYP

Query:  LVGVVEETIQNEPRFPPMRVQLTPLDPHQSSPWSQSTLEPLMMEVDH
         VGVV  T Q +  F P  V    L P Q+ P+SQ+      M VD+
Subjt:  LVGVVEETIQNEPRFPPMRVQLTPLDPHQSSPWSQSTLEPLMMEVDH

A0A5A7PMR1 Cysteine/Histidine-rich C1 domain family protein (Fragment)2.1e-1745.26Show/hide
Query:  LLSSLFAFTFFLSSLLS--SPINFFIPIFISPALTNLGLSSPKVIRYSNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIA
        + S LF F  F  SL +   PI+      IS A T  G  SP            + +S T  NA  CCSA  G  A GTPYH LSS EF PQC+  PP A
Subjt:  LLSSLFAFTFFLSSLLS--SPINFFIPIFISPALTNLGLSSPKVIRYSNVISTANPNSTTISNALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIA

Query:  GWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV
         W + + C  HP+TFPI  VR +NPSG+TS  SV+SV
Subjt:  GWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSV

M5XHK3 Uncharacterized protein (Fragment)3.4e-2374.29Show/hide
Query:  SAAFSCCSAYIGHATIGTPYHRLSNVEFQPQCDTNPPMVGWANISTCGAQPMILPTLAVRSRNPSGNTQL
        S  F+CCS YIGH  IGTPYHRLSN EF PQCDTNPP+ GWA+I+TCGA PM  P LAVRSRNPSG T L
Subjt:  SAAFSCCSAYIGHATIGTPYHRLSNVEFQPQCDTNPPMVGWANISTCGAQPMILPTLAVRSRNPSGNTQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTAGAGGATCCACCTACCATCATACTTTCTCTACTTTCTTTGCCTTTTGCTTTGACTTTCTTCCTGATCTCATTGCCATCATCCCCCATCAATTTCCTTATCCC
ACTCTCTATCTCTTCTGCACTCACTACTCTTGACCTTTCTATTTGGAAATCCTTCATCTCCACACTCAATCCTAATTCCACCACCATTTCAAACGCGTTAAATTGTTGTT
CAGCATACATCGGCCATGTTGCCATCGGTACACCGTGCCACACGCTCTCCAATGTTGAATTCCAACCACAATGCGATATAAATCCTCCGGTGGCTGGATGGGCTAATATC
TCTATCTGTGGTGCCCATCCGATGACCCTTCCAATATCAGCCGTTCGGTCCAGAAATCCCTCAGGTAGGATTCGCTTGGATCTTCGAACTTACCCTTTGGTGGAGGTTGT
CGAAGGGACCATAAGAAGCGAACCTCACTTCGCTCCAGTGCTCGAGCGATCTCTAGCACTTGATCCTCATCGAAGCTTCCTTTGCTCCCAAAGCATAAGAAGATCACTGA
TGCTAGAGGTTGATCGTCAAGCCATTTTACTCTTGGAGATGAAAGCTGAGAGCAAGAAAGCCAGCACTGGATGTGTAAAACAAATAAGAAGGAACCCCAAATTCATTAGC
CACATCTATCATACTGGTGCAAAACATATCGATAACAAATCCGACAAGACGGTTCGAGTCATGAGGAAAGTTGGTGAGCTTGGTCACAACTTCCCTCACAAGGGGCTTGT
GGCTTTCAAGGAATGCAATCAGCATCAAGGGGGGCTTACTACTTTGGCTTGGAGAGGGAAGTTCAGGAAGAACAATAAAGCGTATAGATTTACCCGACTGAATATGTTCT
GCCGTTTTGGTGTCATAGGGAAGCTTGATGACAAGCACAGTAACAGAAAGACGGTCATCTCGGCTAACAAGAACATTTGCCATTTCGACTGTGGATGCGAGATGGCCGAT
CCCCGGCCCAGTTTCACTCAGAAAAGGAAGCAGACAAGTGAAGAATTAAAGCTTAATGGCGAGAATTGCAACGGTGAGACGAGGATCTCAAGCGACAAGAATATTGGCCA
TCTCCACCATGGACGCAAGGAAGATCCGCCCTCCATTACAGCTTTTCGAATTTCTTCACTTTTTTCTTTGACTTTCTTCCGAATCTCGTCCCCGTCGTCCATCAATTTTC
TTATTCCACTCTCTATCTCCTCTGCAGCGTTTAGTTGTTGCTCAGCATACATTGGCCATGCCACCATTGGCACGCCATACCATAGACTCTCCAACGTAGAGTTCCAACCA
CAATGCGATACGAACCCTCCAATGGTTGGATGGGCCAATATCTCTACCTGTGGTGCCCAACCAATGATCCTTCCAACACTCGCCGTTCGGTCAAGAAATCCCTCTGGCAA
CACACAATTGCATGACGAGCACCGTGACGGTGAGACGGTGATCTCGAGTGACAAGAATATTGGCCATCTCAACAGTAGATGCAAGATGGCCTATTCCAGGTCCTGGTATG
AAAACCAGCTCAAACTTCTTCATTTAGTATTGGTAGAGACAGAGAAAAATGGAATCAAAGATGAGAACTTTAAAGGTCAAAGTGGGGGTTTTTTGTTGATTGGAAATGGA
GAAGAGGAGGAAGAAGAAGAAGAGACTCCATTTCTTTGTTGTGGTCCTTCAGAAAGCTTATTTCCTCCTTCTGGCGAGTTCGCCAAAACGTCATCTATAAATTTTCCCAA
CGAGATAAAGGAAGATCCACCTTCCATTACACTTTTCCTACTTTCTTCACTTTTTGCTTTCACCTTCTTCCTCAGCTCATTACTTTCTTCTCCCATCAATTTTTTTATCC
CAATCTTTATCTCTCCCGCACTCACTAATCTCGGCTTGTCTTCACCAAAAGTTATTCGATACTCTAACGTGATCTCCACTGCCAATCCCAATTCCACCACCATTTCAAAC
GCATTGAATTGTTGCTCAGCGTGCATTGGCCACGTTGCCATCGGCACACCATACCATACACTTTCTAGTATCGAGTTCCAACCACAATGCGATACGAATCCTCCAATTGC
TGGGTGGGCCAATATCTCTGCTTGCGATGTCCATCCGATGACCTTCCCAATACTCGTTGTTCGATTGAGAAATCCCTCTGGTAAGACGTCTTTGATGTCGGTTTTCTCGG
TGCTTCGAACTTACCCTTTGGTGGGGGTTGTCGAAGAGACCATACAAAACGAACCCCGCTTTCCTCCAATGCGTGTGCAATTGACACCACTTGATCCTCATCAAAGCTCA
CCATGGTCCCAAAGCACACTAGAACCACTGATGATGGAGGTTGATCATCAAGCCACTCTAATATATCTGCATAGTTTTGAGCCTCACTTGATCCAGCCACTCCTGTATTT
TTCAAGTGCAAAACAGGTCCAACAAAATATAAGGGTGGAAGGACTTGAGAATAGGACTTCACTACATCAACTGTTCCACCACTTCATTGCTACCATTCTCCTCATAAAGC
TCTTGAAGATAAACACTAAAAGCAAGAAAACTAGCACTACAAGTATAAAACACATAACAAGGAACCCCAAATTCATTAGCCACATCTATCATGGTTGTACAAAACATGTC
AATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTAGAGGATCCACCTACCATCATACTTTCTCTACTTTCTTTGCCTTTTGCTTTGACTTTCTTCCTGATCTCATTGCCATCATCCCCCATCAATTTCCTTATCCC
ACTCTCTATCTCTTCTGCACTCACTACTCTTGACCTTTCTATTTGGAAATCCTTCATCTCCACACTCAATCCTAATTCCACCACCATTTCAAACGCGTTAAATTGTTGTT
CAGCATACATCGGCCATGTTGCCATCGGTACACCGTGCCACACGCTCTCCAATGTTGAATTCCAACCACAATGCGATATAAATCCTCCGGTGGCTGGATGGGCTAATATC
TCTATCTGTGGTGCCCATCCGATGACCCTTCCAATATCAGCCGTTCGGTCCAGAAATCCCTCAGGTAGGATTCGCTTGGATCTTCGAACTTACCCTTTGGTGGAGGTTGT
CGAAGGGACCATAAGAAGCGAACCTCACTTCGCTCCAGTGCTCGAGCGATCTCTAGCACTTGATCCTCATCGAAGCTTCCTTTGCTCCCAAAGCATAAGAAGATCACTGA
TGCTAGAGGTTGATCGTCAAGCCATTTTACTCTTGGAGATGAAAGCTGAGAGCAAGAAAGCCAGCACTGGATGTGTAAAACAAATAAGAAGGAACCCCAAATTCATTAGC
CACATCTATCATACTGGTGCAAAACATATCGATAACAAATCCGACAAGACGGTTCGAGTCATGAGGAAAGTTGGTGAGCTTGGTCACAACTTCCCTCACAAGGGGCTTGT
GGCTTTCAAGGAATGCAATCAGCATCAAGGGGGGCTTACTACTTTGGCTTGGAGAGGGAAGTTCAGGAAGAACAATAAAGCGTATAGATTTACCCGACTGAATATGTTCT
GCCGTTTTGGTGTCATAGGGAAGCTTGATGACAAGCACAGTAACAGAAAGACGGTCATCTCGGCTAACAAGAACATTTGCCATTTCGACTGTGGATGCGAGATGGCCGAT
CCCCGGCCCAGTTTCACTCAGAAAAGGAAGCAGACAAGTGAAGAATTAAAGCTTAATGGCGAGAATTGCAACGGTGAGACGAGGATCTCAAGCGACAAGAATATTGGCCA
TCTCCACCATGGACGCAAGGAAGATCCGCCCTCCATTACAGCTTTTCGAATTTCTTCACTTTTTTCTTTGACTTTCTTCCGAATCTCGTCCCCGTCGTCCATCAATTTTC
TTATTCCACTCTCTATCTCCTCTGCAGCGTTTAGTTGTTGCTCAGCATACATTGGCCATGCCACCATTGGCACGCCATACCATAGACTCTCCAACGTAGAGTTCCAACCA
CAATGCGATACGAACCCTCCAATGGTTGGATGGGCCAATATCTCTACCTGTGGTGCCCAACCAATGATCCTTCCAACACTCGCCGTTCGGTCAAGAAATCCCTCTGGCAA
CACACAATTGCATGACGAGCACCGTGACGGTGAGACGGTGATCTCGAGTGACAAGAATATTGGCCATCTCAACAGTAGATGCAAGATGGCCTATTCCAGGTCCTGGTATG
AAAACCAGCTCAAACTTCTTCATTTAGTATTGGTAGAGACAGAGAAAAATGGAATCAAAGATGAGAACTTTAAAGGTCAAAGTGGGGGTTTTTTGTTGATTGGAAATGGA
GAAGAGGAGGAAGAAGAAGAAGAGACTCCATTTCTTTGTTGTGGTCCTTCAGAAAGCTTATTTCCTCCTTCTGGCGAGTTCGCCAAAACGTCATCTATAAATTTTCCCAA
CGAGATAAAGGAAGATCCACCTTCCATTACACTTTTCCTACTTTCTTCACTTTTTGCTTTCACCTTCTTCCTCAGCTCATTACTTTCTTCTCCCATCAATTTTTTTATCC
CAATCTTTATCTCTCCCGCACTCACTAATCTCGGCTTGTCTTCACCAAAAGTTATTCGATACTCTAACGTGATCTCCACTGCCAATCCCAATTCCACCACCATTTCAAAC
GCATTGAATTGTTGCTCAGCGTGCATTGGCCACGTTGCCATCGGCACACCATACCATACACTTTCTAGTATCGAGTTCCAACCACAATGCGATACGAATCCTCCAATTGC
TGGGTGGGCCAATATCTCTGCTTGCGATGTCCATCCGATGACCTTCCCAATACTCGTTGTTCGATTGAGAAATCCCTCTGGTAAGACGTCTTTGATGTCGGTTTTCTCGG
TGCTTCGAACTTACCCTTTGGTGGGGGTTGTCGAAGAGACCATACAAAACGAACCCCGCTTTCCTCCAATGCGTGTGCAATTGACACCACTTGATCCTCATCAAAGCTCA
CCATGGTCCCAAAGCACACTAGAACCACTGATGATGGAGGTTGATCATCAAGCCACTCTAATATATCTGCATAGTTTTGAGCCTCACTTGATCCAGCCACTCCTGTATTT
TTCAAGTGCAAAACAGGTCCAACAAAATATAAGGGTGGAAGGACTTGAGAATAGGACTTCACTACATCAACTGTTCCACCACTTCATTGCTACCATTCTCCTCATAAAGC
TCTTGAAGATAAACACTAAAAGCAAGAAAACTAGCACTACAAGTATAAAACACATAACAAGGAACCCCAAATTCATTAGCCACATCTATCATGGTTGTACAAAACATGTC
AATGACTAA
Protein sequenceShow/hide protein sequence
MALEDPPTIILSLLSLPFALTFFLISLPSSPINFLIPLSISSALTTLDLSIWKSFISTLNPNSTTISNALNCCSAYIGHVAIGTPCHTLSNVEFQPQCDINPPVAGWANI
SICGAHPMTLPISAVRSRNPSGRIRLDLRTYPLVEVVEGTIRSEPHFAPVLERSLALDPHRSFLCSQSIRRSLMLEVDRQAILLLEMKAESKKASTGCVKQIRRNPKFIS
HIYHTGAKHIDNKSDKTVRVMRKVGELGHNFPHKGLVAFKECNQHQGGLTTLAWRGKFRKNNKAYRFTRLNMFCRFGVIGKLDDKHSNRKTVISANKNICHFDCGCEMAD
PRPSFTQKRKQTSEELKLNGENCNGETRISSDKNIGHLHHGRKEDPPSITAFRISSLFSLTFFRISSPSSINFLIPLSISSAAFSCCSAYIGHATIGTPYHRLSNVEFQP
QCDTNPPMVGWANISTCGAQPMILPTLAVRSRNPSGNTQLHDEHRDGETVISSDKNIGHLNSRCKMAYSRSWYENQLKLLHLVLVETEKNGIKDENFKGQSGGFLLIGNG
EEEEEEEETPFLCCGPSESLFPPSGEFAKTSSINFPNEIKEDPPSITLFLLSSLFAFTFFLSSLLSSPINFFIPIFISPALTNLGLSSPKVIRYSNVISTANPNSTTISN
ALNCCSACIGHVAIGTPYHTLSSIEFQPQCDTNPPIAGWANISACDVHPMTFPILVVRLRNPSGKTSLMSVFSVLRTYPLVGVVEETIQNEPRFPPMRVQLTPLDPHQSS
PWSQSTLEPLMMEVDHQATLIYLHSFEPHLIQPLLYFSSAKQVQQNIRVEGLENRTSLHQLFHHFIATILLIKLLKINTKSKKTSTTSIKHITRNPKFISHIYHGCTKHV
ND