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Lsi04G019360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCysteine/Histidine-rich C1 domain family protein
Genome locationchr04:26505967..26509854
RNA-Seq ExpressionLsi04G019360
SyntenyLsi04G019360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACF84670.1 unknown [Zea mays]8.5e-0776.92Show/hide
Query:  TSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPP
        TSSNAL+ CSAYSGH AIGTPCH+LS+ EFQPQ  T PP
Subjt:  TSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPP

EXB98272.1 hypothetical protein L484_014257 [Morus notabilis]2.6e-0870.45Show/hide
Query:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPVIK
        S+TSSNALNCCSAY GH A GTP  +LS+ EF PQCDTNPP  +
Subjt:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPVIK

EYU42868.1 hypothetical protein MIMGU_mgv1a019797mg [Erythranthe guttata]2.9e-0764.71Show/hide
Query:  SILISTANSNSITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPP
        SILIS+A  +S TS NA +CCSAY G VAIGTP   LS +EF PQC+T PP
Subjt:  SILISTANSNSITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPP

KAB8105522.1 hypothetical protein EE612_039441 [Oryza sativa]7.7e-0871.43Show/hide
Query:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV
        S TSSNA  CCSAYSGH AIGTPCH+LS+ EF P C T PP+
Subjt:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV

RWR78433.1 hypothetical protein CKAN_00696400 [Cinnamomum micranthum f. kanehirae]1.7e-0756.92Show/hide
Query:  TLIVAKLVKT-RESILISTANSNSITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV
        TL ++ L  T   S L  TA   S TS+NAL  CSAYSGH  +GTPC  LS+VEF PQC+ NPPV
Subjt:  TLIVAKLVKT-RESILISTANSNSITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV

TrEMBL top hitse value%identityAlignment
A0A0P0X749 Os07g0503200 protein3.7e-0871.43Show/hide
Query:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV
        S TSSNA  CCSAYSGH AIGTPCH+LS+ EF P C T PP+
Subjt:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV

A0A251VBU2 Uncharacterized protein8.8e-1068.75Show/hide
Query:  ISTANSNSITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPP
        +STAN +S T SNAL+CCSAY GH A+GTP H+LS++EF PQ DTNPP
Subjt:  ISTANSNSITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPP

M5XHK3 Uncharacterized protein (Fragment)2.8e-0873.68Show/hide
Query:  SNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV
        S   NCCS Y GHVAIGTP H+LSN EF PQCDTNPP+
Subjt:  SNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV

Q6Z480 Os07g0503200 protein3.7e-0871.43Show/hide
Query:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV
        S TSSNA  CCSAYSGH AIGTPCH+LS+ EF P C T PP+
Subjt:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPV

W9RMG7 Uncharacterized protein1.3e-0870.45Show/hide
Query:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPVIK
        S+TSSNALNCCSAY GH A GTP  +LS+ EF PQCDTNPP  +
Subjt:  SITSSNALNCCSAYSGHVAIGTPCHKLSNVEFQPQCDTNPPVIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGCGGTTCCGGAAGGACGTTGAATTGTATATTTTTGCCTGCAAGAGACGAAGAAAGGAAGCTTCATGGCGAGCACGGTGATAGAGAGACGATGATCTCGAGTGG
CAAGAACGTTGGCCATTTCAACGGTGGATGCAAGGTGACCCATTCCGGGGGCAGTATAAAGGTGACTCTAATCGTTGCAAAATTAGTTAAGACTAGAGAATCTATACTGA
TCTCTACTGCCAATTCCAATTCCATCACTAGTTCAAACGCGTTGAATTGTTGCTCTGCATACAGTGGCCATGTTGCCATCGGCACGCCATGCCACAAACTCTCCAACGTC
GAGTTCCAACCACAATGTGACACAAACCCACCTGTGATCAAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGCGGTTCCGGAAGGACGTTGAATTGTATATTTTTGCCTGCAAGAGACGAAGAAAGGAAGCTTCATGGCGAGCACGGTGATAGAGAGACGATGATCTCGAGTGG
CAAGAACGTTGGCCATTTCAACGGTGGATGCAAGGTGACCCATTCCGGGGGCAGTATAAAGGTGACTCTAATCGTTGCAAAATTAGTTAAGACTAGAGAATCTATACTGA
TCTCTACTGCCAATTCCAATTCCATCACTAGTTCAAACGCGTTGAATTGTTGCTCTGCATACAGTGGCCATGTTGCCATCGGCACGCCATGCCACAAACTCTCCAACGTC
GAGTTCCAACCACAATGTGACACAAACCCACCTGTGATCAAGGATTAA
Protein sequenceShow/hide protein sequence
MNGGSGRTLNCIFLPARDEERKLHGEHGDRETMISSGKNVGHFNGGCKVTHSGGSIKVTLIVAKLVKTRESILISTANSNSITSSNALNCCSAYSGHVAIGTPCHKLSNV
EFQPQCDTNPPVIKD