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Lsi04G019620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAlpha/beta-Hydrolases superfamily protein
Genome locationchr04:26712228..26715091
RNA-Seq ExpressionLsi04G019620
SyntenyLsi04G019620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8082556.1 hypothetical protein EE612_004475 [Oryza sativa]2.8e-1540.44Show/hide
Query:  NAIFASIIAKFSPMHIRGPQPNGMK--ALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSF
        +A  AS  AKF PM +RGPQ NG    A G   AL TP  NL G NS AS PH + SRW+ + G  +ITP G +  PS +S   RR  I TGGY   TS 
Subjt:  NAIFASIIAKFSPMHIRGPQPNGMK--ALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSF

Query:  KIIVTCVIAKTPGLSNSLYPFNLHNPKAISLIEIKI
          +VTC  +    + + + P +L N    +++ +++
Subjt:  KIIVTCVIAKTPGLSNSLYPFNLHNPKAISLIEIKI

KAB8082570.1 hypothetical protein EE612_004494 [Oryza sativa]3.5e-1855.34Show/hide
Query:  NAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKI
        +AI AS  AKF P  IRGPQ  G  A     ALETP  NLSGLNS  SSPH SGS W+  +G  N+TP G V  PS VS    RP+   GGY+LRTS  I
Subjt:  NAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKI

Query:  IVT
        +VT
Subjt:  IVT

KAB8106508.1 hypothetical protein EE612_040879 [Oryza sativa]4.7e-1540.91Show/hide
Query:  ASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKIIVTC
        ASI+AKF PMH  GP      ALG F AL+TP  NL+GLNSSASSPH S SRWI  +G L + P+G +  P+L           TG YNLR S +     
Subjt:  ASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKIIVTC

Query:  VIAKTPGLSNSLYPFNLHNPKAISLIEIKISKTSALACSCHSEYELNNTIVQTS
                 N L  F L +   +      I  TS L    HS   L+  +VQ S
Subjt:  VIAKTPGLSNSLYPFNLHNPKAISLIEIKISKTSALACSCHSEYELNNTIVQTS

KAF7822559.1 cytochrome P450 CYP72A219-like [Senna tora]4.7e-1549.55Show/hide
Query:  YDDESSNEKCCRIIDNAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRT--------LGKLNITPTGKVKFPSL
        Y  ESS EK CRIID  IFAS IAKF PMHI GP PNG       VA +TP ENLSGLNS  SSPH+S S W+ T          +  + P    K   L
Subjt:  YDDESSNEKCCRIIDNAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRT--------LGKLNITPTGKVKFPSL

Query:  VSFLTRRPNIL
           L    NIL
Subjt:  VSFLTRRPNIL

RWR96160.1 hypothetical protein CKAN_02552900 [Cinnamomum micranthum f. kanehirae]2.0e-1348.65Show/hide
Query:  KCCRIIDNAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYN
        K    I NAI ASI AKF P+ I  P P G  A+G F A E P ENL GLNS ASSPH+SGS    ++G  + TP G   FPS +     R  I    YN
Subjt:  KCCRIIDNAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYN

Query:  LRTSFKIIVTC
        L  S++II TC
Subjt:  LRTSFKIIVTC

TrEMBL top hitse value%identityAlignment
A0A0A8Y8G8 Uncharacterized protein1.1e-1755.67Show/hide
Query:  NAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTS
        NAI AS  AKF PM  RGPQPNG  A G   ALE P ENL GLNS AS P  SGS WI++ G   ITP G V  P  +S      N + GGYN RTS
Subjt:  NAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTS

A0A0P0V5H9 Os01g0627450 protein1.3e-1540.44Show/hide
Query:  NAIFASIIAKFSPMHIRGPQPNGMK--ALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSF
        +A  AS  AKF PM +RGPQ NG    A G   AL TP  NL G NS AS PH + SRW+ + G  +ITP G +  PS +S   RR  I TGGY   TS 
Subjt:  NAIFASIIAKFSPMHIRGPQPNGMK--ALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSF

Query:  KIIVTCVIAKTPGLSNSLYPFNLHNPKAISLIEIKI
          +VTC  +    + + + P +L N    +++ +++
Subjt:  KIIVTCVIAKTPGLSNSLYPFNLHNPKAISLIEIKI

A0A0P0V5I4 Os01g0628950 protein1.7e-1855.34Show/hide
Query:  NAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKI
        +AI AS  AKF P  IRGPQ  G  A     ALETP  NLSGLNS  SSPH SGS W+  +G  N+TP G V  PS VS    RP+   GGY+LRTS  I
Subjt:  NAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKI

Query:  IVT
        +VT
Subjt:  IVT

A0A0P0X950 Os07g0635150 protein2.3e-1540.91Show/hide
Query:  ASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKIIVTC
        ASI+AKF PMH  GP      ALG F AL+TP  NL+GLNSSASSPH S SRWI  +G L + P+G +  P+L           TG YNLR S +     
Subjt:  ASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRPNILTGGYNLRTSFKIIVTC

Query:  VIAKTPGLSNSLYPFNLHNPKAISLIEIKISKTSALACSCHSEYELNNTIVQTS
                 N L  F L +   +      I  TS L    HS   L+  +VQ S
Subjt:  VIAKTPGLSNSLYPFNLHNPKAISLIEIKISKTSALACSCHSEYELNNTIVQTS

A0A5A7R8B8 Alpha/beta-Hydrolases superfamily protein9.6e-1448.62Show/hide
Query:  GACVYDDESSNEKCCRIIDNAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFL
        GA  YD ESSNE   RI   A F SI  K   M +RGPQ  G     F VAL TP EN SGLNS  S P  SGS WI   GK   TP G+V   + V   
Subjt:  GACVYDDESSNEKCCRIIDNAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFL

Query:  TRRPNILTG
          R NI  G
Subjt:  TRRPNILTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGGCGGCTGTGGGAGCATGTGTATATGATGACGAAAGCTCAAATGAGAAGTGTTGTAGGATCATTGATAATGCCATTTTTGCTTCAATCATAGCAAAGTTTAG
TCCTATGCATATTCGAGGACCCCAACCAAATGGTATGAAAGCGCTTGGATTTTTTGTTGCTTTAGAAACTCCCTTAGAAAATCTTTCTGGTTTAAATTCATCTGCATCTT
CTCCCCATGACTCAGGATCACGTTGGATAAGAACACTTGGTAAGCTCAACATCACTCCTACTGGTAAAGTCAAATTTCCAAGTCTTGTTTCTTTCTTAACAAGACGGCCA
AACATACTCACTGGTGGGTATAACCTGAGAACCTCGTTCAAGATCATAGTTACCTGTGTGATTGCAAAAACACCAGGTTTATCAAATAGCCTTTATCCTTTCAACTTACA
TAATCCAAAGGCAATAAGCTTGATTGAGATTAAGATCTCAAAGACCTCTGCTCTTGCTTGTTCTTGCCATTCTGAGTATGAACTCAACAATACCATCGTCCAAACTAGTA
ACCTACTCCCAAATGCAGTTCGAGAAATCACATCAGCAGCCATATTTTGTAGGAACAAAAAACGAGAACATTATCAAATGGGCTCATATAGTAACTCCAATAATTTGTTC
TCTATTTGTCTACAAGTACCTACACAGGTTGATTATCTTTCTGTGTTTGACCCATTTTGGTCCTTCATAATTTACAAGCCCATCTGCAAGCAACTTGACAAGGGGATTCA
TAGTTGGCTTTTGGAAATCATTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGGGCGGCTGTGGGAGCATGTGTATATGATGACGAAAGCTCAAATGAGAAGTGTTGTAGGATCATTGATAATGCCATTTTTGCTTCAATCATAGCAAAGTTTAG
TCCTATGCATATTCGAGGACCCCAACCAAATGGTATGAAAGCGCTTGGATTTTTTGTTGCTTTAGAAACTCCCTTAGAAAATCTTTCTGGTTTAAATTCATCTGCATCTT
CTCCCCATGACTCAGGATCACGTTGGATAAGAACACTTGGTAAGCTCAACATCACTCCTACTGGTAAAGTCAAATTTCCAAGTCTTGTTTCTTTCTTAACAAGACGGCCA
AACATACTCACTGGTGGGTATAACCTGAGAACCTCGTTCAAGATCATAGTTACCTGTGTGATTGCAAAAACACCAGGTTTATCAAATAGCCTTTATCCTTTCAACTTACA
TAATCCAAAGGCAATAAGCTTGATTGAGATTAAGATCTCAAAGACCTCTGCTCTTGCTTGTTCTTGCCATTCTGAGTATGAACTCAACAATACCATCGTCCAAACTAGTA
ACCTACTCCCAAATGCAGTTCGAGAAATCACATCAGCAGCCATATTTTGTAGGAACAAAAAACGAGAACATTATCAAATGGGCTCATATAGTAACTCCAATAATTTGTTC
TCTATTTGTCTACAAGTACCTACACAGGTTGATTATCTTTCTGTGTTTGACCCATTTTGGTCCTTCATAATTTACAAGCCCATCTGCAAGCAACTTGACAAGGGGATTCA
TAGTTGGCTTTTGGAAATCATTGATTAATGAAAACACAATTTTAAGTTGTTCAGGGTCCATGATGTGCACTCTTGGTATGGGCCCAAGCCACATAAATGAATTCTTGCCT
GCACTCCAAAAAAAAAATACATAAATGTTTTAGAACAAAATTACATTACAG
Protein sequenceShow/hide protein sequence
MKRAAVGACVYDDESSNEKCCRIIDNAIFASIIAKFSPMHIRGPQPNGMKALGFFVALETPLENLSGLNSSASSPHDSGSRWIRTLGKLNITPTGKVKFPSLVSFLTRRP
NILTGGYNLRTSFKIIVTCVIAKTPGLSNSLYPFNLHNPKAISLIEIKISKTSALACSCHSEYELNNTIVQTSNLLPNAVREITSAAIFCRNKKREHYQMGSYSNSNNLF
SICLQVPTQVDYLSVFDPFWSFIIYKPICKQLDKGIHSWLLEIID