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Lsi04G019650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglucan endo-1,3-beta-glucosidase-like
Genome locationchr04:26722912..26723545
RNA-Seq ExpressionLsi04G019650
SyntenyLsi04G019650
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146007.1 glucan endo-1,3-beta-D-glucosidase [Cucumis sativus]7.9e-4687.04Show/hide
Query:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IMQ+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVTTDPS
        L+V TDPS
Subjt:  LVVTTDPS

XP_008452435.1 PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis melo]4.6e-4687.04Show/hide
Query:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IMQ+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVTTDPS
        LV+ TDPS
Subjt:  LVVTTDPS

XP_022137818.1 glucan endo-1,3-beta-D-glucosidase [Momordica charantia]1.7e-4074.77Show/hide
Query:  MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGL
        MA AA L F LLFLSFLS  DLLAVN +KTWC+ +PSSD+ATLLAN NYAC+QVDC+IMQ+G PCFYPDNL N A++AM+LYY+S+GKNQWNCDFRGS L
Subjt:  MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGL

Query:  VVTTDPS
        +V TDPS
Subjt:  VVTTDPS

XP_022982186.1 major pollen allergen Ole e 10-like isoform X2 [Cucurbita maxima]1.0e-4077.98Show/hide
Query:  MAKAA--TLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGS
        MAKAA  TLSFLLLFLS     DLLAVN  +TWC+P+PSSD ATLLAN +YAC+QVDC+IMQ+G PCFYPDNL NHA+IAM+LYYNSKGKNQWNCDFRGS
Subjt:  MAKAA--TLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVTTDPS
        GL+V TDPS
Subjt:  GLVVTTDPS

XP_038899316.1 major pollen allergen Ole e 10 [Benincasa hispida]1.1e-4787.85Show/hide
Query:  MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGL
        MAK+ATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLAN N+AC+QVDC+IMQ+G PC YPD L N AAIAMSLYYNSKGKNQWNCDFRGSGL
Subjt:  MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGL

Query:  VVTTDPS
        +V TDPS
Subjt:  VVTTDPS

TrEMBL top hitse value%identityAlignment
A0A0A0L4I1 Hydrolase, hydrolyzing O-glycosyl compounds3.8e-4687.04Show/hide
Query:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IMQ+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVTTDPS
        L+V TDPS
Subjt:  LVVTTDPS

A0A1S3BUY7 glucan endo-1,3-beta-D-glucosidase2.2e-4687.04Show/hide
Query:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IMQ+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVTTDPS
        LV+ TDPS
Subjt:  LVVTTDPS

A0A5A7VF23 Glucan endo-1,3-beta-D-glucosidase2.2e-4687.04Show/hide
Query:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IMQ+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVTTDPS
        LV+ TDPS
Subjt:  LVVTTDPS

A0A6J1IYM5 major pollen allergen Ole e 10-like isoform X24.9e-4177.98Show/hide
Query:  MAKAA--TLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGS
        MAKAA  TLSFLLLFLS     DLLAVN  +TWC+P+PSSD ATLLAN +YAC+QVDC+IMQ+G PCFYPDNL NHA+IAM+LYYNSKGKNQWNCDFRGS
Subjt:  MAKAA--TLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVTTDPS
        GL+V TDPS
Subjt:  GLVVTTDPS

A0A6J1J1Y2 major pollen allergen Ole e 10-like isoform X18.3e-4179.09Show/hide
Query:  MAKAA--TLSFLLLFLSFLSGRDLLAVNA-QKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRG
        MAKAA  TLSFLLLFLS     DLLAVN  QKTWC+P+PSSD ATLLAN +YAC+QVDC+IMQ+G PCFYPDNL NHA+IAM+LYYNSKGKNQWNCDFRG
Subjt:  MAKAA--TLSFLLLFLSFLSGRDLLAVNA-QKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRG

Query:  SGLVVTTDPS
        SGL+V TDPS
Subjt:  SGLVVTTDPS

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 14.6e-1234Show/hide
Query:  LFLSFLSGRDLLAVN--AQKTWCIPKPSSDQATLLANTNYAC--AQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS
        ++L  +SG      N    +T+CI     D  TL A  ++AC   + +C  +Q G  C+ P+N+  HA+ A + YY  +G+   +CDF+G  ++ TTDPS
Subjt:  LFLSFLSGRDLLAVN--AQKTWCIPKPSSDQATLLANTNYAC--AQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS

P52409 Glucan endo-1,3-beta-glucosidase8.9e-1644.16Show/hide
Query:  WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS
        WC+ K  ++   L  N NYAC  VDCK +Q G  CF P++L  HA+  M+ YY + G     CDF+G+G+V ++DPS
Subjt:  WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS

Q84V39 Major pollen allergen Ole e 101.2e-1541.98Show/hide
Query:  KTWCIPKPSSDQATLLANTNYACAQ--VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS
        K WC+PK  +  A L +N +Y C+Q  +DC  +Q    CF P+ +  HA+ AM+ +Y SKG+N ++CDF G+G + ++DPS
Subjt:  KTWCIPKPSSDQATLLANTNYACAQ--VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS

Q94G86 Glucan endo-1,3-beta-D-glucosidase1.6e-1746.34Show/hide
Query:  AQKTWCIPKPSSDQATLLANTNYACAQ-VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS
        A  +WC+PKP      L  N NYAC Q +DC  +Q G  CF P+ +  HAA  M+LYY S G+N WNCDF  +  +  T+PS
Subjt:  AQKTWCIPKPSSDQATLLANTNYACAQ-VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS

Q9M069 Glucan endo-1,3-beta-glucosidase 76.0e-1237.18Show/hide
Query:  WCIPKPSSDQATLLANTNYACAQ-VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS
        WC+PK  +    L A+ ++AC   +DC  +Q G  CF P+N+ +HAA AM++Y+    K   +CDF  +  V + +PS
Subjt:  WCIPKPSSDQATLLANTNYACAQ-VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS

Arabidopsis top hitse value%identityAlignment
AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein2.9e-3052.78Show/hide
Query:  MAKAATLSFLLLFLSFLSGRDLLAVNAQ-KTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAKA      L+FL  +S R+ + VNA+ KTWC+ KPSSDQ  L  N N+AC+ VDC+++  G PC+ P NL NHA+IAM+LYY + G+N WNC+F+ SG
Subjt:  MAKAATLSFLLLFLSFLSGRDLLAVNAQ-KTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVTTDPS
        L+  T+PS
Subjt:  LVVTTDPS

AT2G43660.1 Carbohydrate-binding X8 domain superfamily protein2.2e-1736.7Show/hide
Query:  ATLSFLLLFLSFLSGRDLLAVNAQK----TWCIPKPSSDQATLLANTNYAC--AQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGS
        A + F  + L  +S    + VNAQ     +WC+ KP +    L+ N N  C  + V C+++ +G  C+ P NL+N A++ M+LYY ++G+    CDF GS
Subjt:  ATLSFLLLFLSFLSGRDLLAVNAQK----TWCIPKPSSDQATLLANTNYAC--AQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVTTDPS
        G++  TDPS
Subjt:  GLVVTTDPS

AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein5.9e-2340.54Show/hide
Query:  MAKA-ATLSFLLLFLSFLSGRDLLAVNAQKT---WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFR
        MAKA   L F++    +  G  +    A ++   WC+ KPS+D   L  N N+AC+++DC+I+ +G  C+ PD++ + A++AM+LYY ++G++ WNC+F 
Subjt:  MAKA-ATLSFLLLFLSFLSGRDLLAVNAQKT---WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFR

Query:  GSGLVVTTDPS
        GSGL+  TDPS
Subjt:  GSGLVVTTDPS

AT3G28250.1 Carbohydrate-binding X8 domain superfamily protein7.2e-2149.35Show/hide
Query:  WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS
        WC+ KP +    L+ N NYAC+ VDC+I+     C+ PDN++N A++ M+LYY ++G+N WNC+F  SGLV  TDPS
Subjt:  WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS

AT5G53600.1 Carbohydrate-binding X8 domain superfamily protein9.7e-1840.59Show/hide
Query:  LLLFLSFLSGR---DLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDP
        LL FL  LS      +  V  ++TWC   P+S    L +N N+AC  VDC  +Q G  C+YP+ L +HAA AM+ YY S+G     C F  +G ++++DP
Subjt:  LLLFLSFLSGR---DLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDP

Query:  S
        S
Subjt:  S


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAGCGGCCACTCTCTCCTTTTTGCTTCTATTCCTTTCGTTCCTTTCAGGACGAGATTTGCTGGCAGTAAATGCACAGAAAACGTGGTGCATTCCGAAGCCTTC
GTCGGATCAAGCGACGTTGTTGGCGAATACCAATTACGCTTGTGCTCAGGTAGATTGCAAAATAATGCAACAAGGAAACCCCTGCTTTTATCCTGATAATTTGTTCAACC
ATGCTGCCATAGCTATGAGTTTGTATTACAATTCCAAAGGGAAGAATCAATGGAACTGTGACTTTAGAGGCTCTGGTCTCGTAGTCACCACTGATCCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATTCATTCCATCTCCCTCCTATAAATTCCTCCTTCATCTTCTTCCTTTTCAGATCTCTTCCACTTCCTTCAATAATTCCCTCTGATCGCAGCACAACAGAGTACTATCAA
TGGCAAAAGCGGCCACTCTCTCCTTTTTGCTTCTATTCCTTTCGTTCCTTTCAGGACGAGATTTGCTGGCAGTAAATGCACAGAAAACGTGGTGCATTCCGAAGCCTTCG
TCGGATCAAGCGACGTTGTTGGCGAATACCAATTACGCTTGTGCTCAGGTAGATTGCAAAATAATGCAACAAGGAAACCCCTGCTTTTATCCTGATAATTTGTTCAACCA
TGCTGCCATAGCTATGAGTTTGTATTACAATTCCAAAGGGAAGAATCAATGGAACTGTGACTTTAGAGGCTCTGGTCTCGTAGTCACCACTGATCCAAGTTAG
Protein sequenceShow/hide protein sequence
MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS