; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G019800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L13
Genome locationchr04:26855033..26858324
RNA-Seq ExpressionLsi04G019800
SyntenyLsi04G019800
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.6e-12691.53Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N + SNR IPR SL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

XP_004146016.1 50S ribosomal protein L13, chloroplastic [Cucumis sativus]3.9e-12892.34Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTL NG+TSN+  PR SLL  FPLPHSKSSFLLTQT+ISL SN K   LQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

XP_008463780.1 PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]1.1e-12792.74Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+L NG+TSNR IP  SLL  FPLPHSKSSFLLTQTTI L SN K   L+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]1.2e-12691.94Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N + SNR IPR SL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]1.6e-12691.94Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL NG+ SNR +PR SL+AGFPL  SKSSFL TQTTI+L S PKS +LQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein1.9e-12892.34Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTL NG+TSN+  PR SLL  FPLPHSKSSFLLTQT+ISL SN K   LQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

A0A1S3CK07 50S ribosomal protein L13, chloroplastic5.4e-12892.74Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+L NG+TSNR IP  SLL  FPLPHSKSSFLLTQTTI L SN K   L+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like6.7e-12691.94Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HSTL NGS SNRGIPRKS + GFPLP SKS  L TQTTI+LNS  KS  +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like6.0e-12791.94Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N + SNR IPR SL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like8.7e-12691.13Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHST  N + SNR IPRKSL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L134.9e-4966.44Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK    YTPS+D G FVIVVNAEKVAV+G+KRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIR
        ERIIEHAV+GMLPK  LGR LF  LKVY GPDHPH AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIR

P12629 50S ribosomal protein L13, chloroplastic4.8e-8162.4Show/hide
Query:  MLCASSST-PTFSLHSTLFNGSTSNRGI---PRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTW
        M CASS T P+     + F  +     +   PR ++ A   +   KS+   T+ T       ++   +     +  VPL+QRWMF  +E  GPDIWN TW
Subjt:  MLCASSST-PTFSLHSTLFNGSTSNRGI---PRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTW

Query:  YPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERII
        YPK+ADHV T+K WYVVDATD ILGR+ASTIA HIRGK+LA+YTPSVDMGAFVIVVNA+KVAVSG+KRTQKLYRRHSGRPGG+  ETFDQLQ+RIPERII
Subjt:  YPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERII

Query:  EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        EHAVRGMLPKGRLGR LFNHLKVYKG +HPH AQ+P++LP+RDKRI  E+
Subjt:  EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

Q3MF94 50S ribosomal protein L138.8e-5169.66Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+ A YTP +D G FVIVVNAEKVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPHDAQKP EL I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPI

Q8YPK6 50S ribosomal protein L132.6e-5068.97Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+ A YTP +D G FVIVVNA+KVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPHDAQKP EL I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPI

Q9SYL9 50S ribosomal protein L13, chloroplastic1.5e-9067.59Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L + S  + G  RKS   GF L    ++       + + +N K   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+LA+YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein1.1e-9167.59Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L + S  + G  RKS   GF L    ++       + + +N K   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+LA+YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPH+AQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHDAQKPVELPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein1.3e-1737.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD  TY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHDAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHDAQKPVE

AT3G01790.2 Ribosomal protein L13 family protein1.3e-1737.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD  TY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHDAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHDAQKPVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTCTTTTCAATGGAAGCACAAGTAACAGAGGCATTCCCAGAAAGTCACTCCTTGCTGG
GTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCACGATTTCTCTAAACTCCAACCCCAAGAGTCCGCTCCTTCAAGTGCGAGCTCAGGAGCTGGATC
GTGTCCCTTTAGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGATCATGTGAACACAGAAAAA
CCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGGCAACCTACACTCCAAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACCGTAG
AAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCAAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAG
GTTTACAAAGGACCAGACCATCCACATGATGCACAAAAGCCAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
CAAATTTATCCGTTCTTCCGGTTTCCCATTTCTCATCTTCGCATTCACAAAGGCAAGAGTCTTATCCACTATCCATAGCAGAAATTTCTCAACTGAAACACCGCCAAAGC
TACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTCTTTTCAATGGAAGCACAAGTAACAGAGGCATTCCCAGAAAGTCACTCCTTG
CTGGGTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCACGATTTCTCTAAACTCCAACCCCAAGAGTCCGCTCCTTCAAGTGCGAGCTCAGGAGCTG
GATCGTGTCCCTTTAGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGATCATGTGAACACAGA
AAAACCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGGCAACCTACACTCCAAGTGTGG
ATATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACC
GTAGAAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCAAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTT
GAAGGTTTACAAAGGACCAGACCATCCACATGATGCACAAAAGCCAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAGTATGATCTACTAAGAGAAG
ACAAACGAGGAAGAGACAAAGCTCTCTCATATGAGGTCCCCAATGTTCATAAAATCGAGTTAGAGTTTTCATGCTTCAACTCAGTTTGATATCAGTATTTGATCTGTAAT
TTGATTCCAAATTCTAGTCTCCTCTGATAACATCTTAGTCCTAAGTTGCGTTTTCGAAGTTATTAATTCAGAAGAGGAAAATTTTCAAATCTTGCCCTGTTGAAGGTCGT
GATAATGGTAATTTGATTACATTTGTTGATTGATTTCCCTAAAAGGCATATTAGTATCACAATCCATGAAAGTGGTGATCTTTTGGATTCTAACTTTATATGGATTGAGC
TGAATTTGTACAACAATGAACATTAGTTTATAATTACATGCATATATATTTCAGTGGAAGCTTTAGAGGAAA
Protein sequenceShow/hide protein sequence
MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEK
PWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLK
VYKGPDHPHDAQKPVELPIRDKRINKER