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Lsi04G019960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr04:27089172..27091860
RNA-Seq ExpressionLsi04G019960
SyntenyLsi04G019960
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CED89884.1 uncharacterized protein [Cucumis sativus]3.5e-2386.76Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M G+EV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES NDAVQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
XP_008463762.1 PREDICTED: uncharacterized protein LOC103501828 [Cucumis melo]2.7e-2386.76Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+Q QKQRLNHQLSESRND VQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
XP_011654034.1 uncharacterized protein LOC105435291 [Cucumis sativus]1.2e-2388.24Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES NDAVQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
XP_023522224.1 uncharacterized protein LOC111786101 isoform X2 [Cucurbita pepo subsp. pepo]6.0e-2385.29Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M GEEVAGPAGPKVLRLLYFAGAGF+FTIA+NKWREIER SLL+QQQKQRL+HQ +ES NDAVQKVV+
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
XP_038897241.1 uncharacterized protein LOC120085366 [Benincasa hispida]3.1e-2798.53Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRND+VQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
TrEMBL top hitse value%identityAlignment
A0A090ITT6 Uncharacterized protein1.7e-2386.76Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M G+EV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES NDAVQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
A0A0A0L208 Uncharacterized protein5.8e-2488.24Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES NDAVQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
A0A1S3CKG5 uncharacterized protein LOC1035018281.3e-2386.76Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+Q QKQRLNHQLSESRND VQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
A0A5D3DXD1 Transmembrane protein1.3e-2386.76Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+Q QKQRLNHQLSESRND VQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
A0A6J1C1U1 uncharacterized protein LOC1110065635.5e-2280.88Show/hide
Query:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        MAGEEV+GPAGPKVLR LYFAGAGF+F IA+NKWRE+ER SLL+Q QKQ LNHQ SE+ NDAVQKVVE
Subjt:  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16916.1 unknown protein3.9e-1252.46Show/hide
Query:  GPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE
        GP  PK+LR++YF GAGF+ T AINKWRE+ERNSLL+Q+Q++     +     D+VQK ++
Subjt:  GPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAGAAGAGGTTGCTGGTCCGGCGGGCCCTAAGGTTCTCCGTCTCCTCTATTTCGCCGGCGCTGGATTCATTTTCACCATCGCGATAAACAAGTGGCGGGAGAT
CGAGCGCAATTCTCTGTTGGAACAACAGCAGAAGCAGCGGTTGAATCATCAATTATCGGAATCTCGTAATGATGCGGTGCAGAAAGTCGTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTCAGTCGGTCGAAAACCTATTCCGAAGCTTTGAGTTTTCATGTTTATCCTAAAAATAAGAACGTCGTTTTTCCCCCTAATCATTGGGAAGTTGAAATATCCGAAATTT
TGACCTTTCCAGTTTCCTGCACACAGAGATCGCAGGGTTACGGCGACGGCGACGGCGTGAAGGTAGAAGTGAATGGCGGGAGAAGAGGTTGCTGGTCCGGCGGGCCCTAA
GGTTCTCCGTCTCCTCTATTTCGCCGGCGCTGGATTCATTTTCACCATCGCGATAAACAAGTGGCGGGAGATCGAGCGCAATTCTCTGTTGGAACAACAGCAGAAGCAGC
GGTTGAATCATCAATTATCGGAATCTCGTAATGATGCGGTGCAGAAAGTCGTCGAGTGATCTCAGGGGTGCTACTCAAGGACATTAAGATGGTTTCAGCTCAACAGTTAA
GCCCCTCATTTTCCACCAGATTTATTGTTATTGTTAAAAGTACATGTAGGATTATCTATGTTTTTTAGCTGTGCTGCTGGGTAGATTTGAGCCAATACCAAGGAAATGAT
GCCTCTGTCAATAGTACTGTTTTCTTCCTTCATCCCTAATCCAGCCATCTCTCTGTCTCTAATCTCTATTATATGGACAAGTTCATCATGCTCTGAAGGAAACATCACTT
TCAACTTGTACTACCAAAAGCGTAACTAGAATAAATTTCTCCTTTTCTACCTGTTGGCCAATTTTGAAATTCATTTCTAATTGTCTATGTTCATTTCTAATTGAAAGTTC
ATTTCTTAATCAATCGTCTATATAGATGGATAAAGATGCTTTTAGTTTTGGGCTAGTTGAGAATCATATTTTAAAACAACTTTCAAATTCAA
Protein sequenceShow/hide protein sequence
MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDAVQKVVE