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Lsi04G019970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:27103231..27103503
RNA-Seq ExpressionLsi04G019970
SyntenyLsi04G019970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066754.1 hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa]3.9e-3084.62Show/hide
Query:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
        MMGS+KFIMVALLVVA VL QAHMSLGIRKLS KEMK+  MG +DV+ MLLGALPKGPTPPSAPSERGNPAPF+DGDR+LVSAPSP IGHR
Subjt:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
KAG6607932.1 hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1359.46Show/hide
Query:  MGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVDMLLGALPKGPTPPSAPSERGNPAPFNDG
        M +KKF M A L +A +L Q H +L IR    K+ KLPSMG +D DMLLG+LP+GP PPSAPS R NPAPF+ G
Subjt:  MGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVDMLLGALPKGPTPPSAPSERGNPAPFNDG
KGN55050.1 hypothetical protein Csa_012928 [Cucumis sativus]2.3e-3084.62Show/hide
Query:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
        MMGSKK IMVALLVVALVL QAHMSLGIRKLS KEMK+  +G +DV+ MLLGALPKGPTPPSAPSERGNPAPF+DGDR+LVSAPSP IGHR
Subjt:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
TrEMBL top hitse value%identityAlignment
A0A0A0KZH3 Uncharacterized protein1.1e-3084.62Show/hide
Query:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
        MMGSKK IMVALLVVALVL QAHMSLGIRKLS KEMK+  +G +DV+ MLLGALPKGPTPPSAPSERGNPAPF+DGDR+LVSAPSP IGHR
Subjt:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
A0A5A7VHE0 Uncharacterized protein1.9e-3084.62Show/hide
Query:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
        MMGS+KFIMVALLVVA VL QAHMSLGIRKLS KEMK+  MG +DV+ MLLGALPKGPTPPSAPSERGNPAPF+DGDR+LVSAPSP IGHR
Subjt:  MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVD-MLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR
A0A5B7APD8 Uncharacterized protein (Fragment)4.0e-0441.11Show/hide
Query:  VALLVVALVLGQAHMSLGIRK-LSKKEMKLPSMGAIDVDMLLGALPKGPTPPSAPSERGNPAPFNDG---------DRILVSAPSPRIGH
        ++L+ + +++  A  SL  RK LS ++MK PS+   D  ++L A+PKG TPPS+PS +G+    N+          DRIL S PSP IGH
Subjt:  VALLVVALVLGQAHMSLGIRK-LSKKEMKLPSMGAIDVDMLLGALPKGPTPPSAPSERGNPAPFNDG---------DRILVSAPSPRIGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16950.1 unknown protein2.3e-0442.59Show/hide
Query:  MLLGALPKGPTPPSAPSERGNPAPFNDGD------------RILVSAPSPRIGH
        + L ALPKG  PPS PS++G+ +P +D D            R L S PSP +GH
Subjt:  MLLGALPKGPTPPSAPSERGNPAPFNDGD------------RILVSAPSPRIGH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGTAGCAAAAAGTTCATAATGGTGGCATTGTTGGTGGTGGCCTTGGTGTTGGGCCAAGCACACATGAGCTTGGGAATAAGGAAGTTATCCAAGAAGGAGATGAA
GTTGCCTTCAATGGGGGCCATTGACGTTGACATGCTTCTCGGCGCTCTTCCGAAAGGCCCGACACCCCCATCTGCCCCTAGTGAGCGAGGCAATCCTGCTCCTTTCAATG
ATGGCGATCGGATCTTGGTATCTGCGCCGAGCCCCAGAATAGGTCATCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGTAGCAAAAAGTTCATAATGGTGGCATTGTTGGTGGTGGCCTTGGTGTTGGGCCAAGCACACATGAGCTTGGGAATAAGGAAGTTATCCAAGAAGGAGATGAA
GTTGCCTTCAATGGGGGCCATTGACGTTGACATGCTTCTCGGCGCTCTTCCGAAAGGCCCGACACCCCCATCTGCCCCTAGTGAGCGAGGCAATCCTGCTCCTTTCAATG
ATGGCGATCGGATCTTGGTATCTGCGCCGAGCCCCAGAATAGGTCATCGCTAA
Protein sequenceShow/hide protein sequence
MMGSKKFIMVALLVVALVLGQAHMSLGIRKLSKKEMKLPSMGAIDVDMLLGALPKGPTPPSAPSERGNPAPFNDGDRILVSAPSPRIGHR