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Lsi04G019980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G019980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionhistidine-rich glycoprotein-like
Genome locationchr04:27113888..27115418
RNA-Seq ExpressionLsi04G019980
SyntenyLsi04G019980
Gene Ontology termsNA
InterPro domainsIPR002395 - HMW kininogen
IPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591765.1 hypothetical protein SDJN03_14111, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2870.54Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------
        MAYSKTFLLLGLLLALLF+SSHVSAR LEE+K DVE+D HGHHDH H  H HHDH HHGHD   + +D HHGHHGGGHGGHHGHDADV+DLDGH      
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------

Query:  --------HHHHHDHDHDHGHHSHDHDAK
                HH HHDH   HGHH HDHDAK
Subjt:  --------HHHHHDHDHDHGHHSHDHDAK

KAG7024647.1 hypothetical protein SDJN02_13465, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2871.32Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------
        MAYSKTFLLLGLLLALLFVSSHVSAR LEE+K DVE+D HGHHDH H  H HHDH HHGHD   + +D HHGHHGGGHGGHHGHDADV+DLDGH      
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------

Query:  --------HHHHHDHDHDHGHHSHDHDAK
                HH HHDH   HGHH HDHDAK
Subjt:  --------HHHHHDHDHDHGHHSHDHDAK

XP_022935989.1 histidine-rich glycoprotein-like [Cucurbita moschata]1.5e-2670.73Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------
        MAYSKTFLLLGLLLALLF+SSHVSAR LEE+K DVE+D HGHHDH      HHDH HHGHD   + +D HH HHGGGHGGHHGHDAD++DLDGH      
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------

Query:  --HHHHHDHDHDHGHHSHDHDAK
          HH HHDH   HGHH HDHDAK
Subjt:  --HHHHHDHDHDHGHHSHDHDAK

XP_023536482.1 histidine-rich glycoprotein-like [Cucurbita pepo subsp. pepo]5.2e-2769.77Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------
        MAYSKTFLLLGLLLALLFVSSHVSAR LEE+K DVE+D HGHHDH      HHDH HHGHD   + +D HHGHHGGGHGGHHGHDADV+DLDGH      
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------

Query:  --------HHHHHDHDHDHGHHSHDHDAK
                HH HHDH   HGHH HDHDAK
Subjt:  --------HHHHHDHDHDHGHHSHDHDAK

XP_038900076.1 histidine-rich glycoprotein-like [Benincasa hispida]2.3e-3074.8Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHH------HDHDHHGHDHEAEV---DDHHGHHGGG---HGGHHGHDADVN
        MAYSKT L+LGLLLALLFVSSHVSARLLEE+K  VE+D HGHH HDHGHHHH      HDH HHGHDH+A V   D HHGHHGGG   HGGHHGHDA+VN
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHH------HDHDHHGHDHEAEV---DDHHGHHGGG---HGGHHGHDADVN

Query:  DLDGHHHH-----HHDHDHDHGHHSHD
        DLDGHHHH     HHDH HDHGHH HD
Subjt:  DLDGHHHH-----HHDHDHDHGHHSHD

TrEMBL top hitse value%identityAlignment
A0A6J1CBC6 histidine-rich membrane protein KE4 homolog 2-like4.2e-2267.72Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETD--------QHGHHDHDHGH-HHHHDHDHH-GHDHEAEV---DDHHGHHGGGHGGH----HGH
        MAYSKT LLLGLLLALLFVSSHVSARLL E+K  VE D         HGHHDHDH H HH HDHDHH GH H+A++   DDHHGHHGGGHGGH    HGH
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETD--------QHGHHDHDHGH-HHHHDHDHH-GHDHEAEV---DDHHGHHGGGHGGH----HGH

Query:  DADVNDLDGHHHHHHDHDHDHGHHSHD
        DAD++ LD HH H     HDHGHH HD
Subjt:  DADVNDLDGHHHHHHDHDHDHGHHSHD

A0A6J1F6Z7 histidine-rich glycoprotein-like7.3e-2770.73Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------
        MAYSKTFLLLGLLLALLF+SSHVSAR LEE+K DVE+D HGHHDH      HHDH HHGHD   + +D HH HHGGGHGGHHGHDAD++DLDGH      
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------

Query:  --HHHHHDHDHDHGHHSHDHDAK
          HH HHDH   HGHH HDHDAK
Subjt:  --HHHHHDHDHDHGHHSHDHDAK

A0A6J1FL97 prostatic spermine-binding protein-like1.2e-0544.65Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHG--------------HHDHDHGHHHHHDHDHHGHDHEAEVDDHHGHHGGGHGGH------
        MAYSKTFLLLGLLLALL+VSSHVSARLLEE+K  V++D H                 DHDH  H H DHD H HD + + DDH  H    H  H      
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHG--------------HHDHDHGHHHHHDHDHHGHDHEAEVDDHHGHHGGGHGGH------

Query:  --------------------------HGHDADVNDLDGHHHHH-HDHDHDHGHHSHDHD
                                  H HDA+VN LD HH  + HDHDHD   H H+HD
Subjt:  --------------------------HGHDADVNDLDGHHHHH-HDHDHDHGHHSHDHD

A0A6J1IKT3 histidine-rich glycoprotein-like1.6e-2665.22Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------
        MAYSKTFLLLGLLLALLFVSSHVSAR LEE+K DVE+D HGHHDH      HHDH HHGHD   + +D HHGHHGGGHGGHHGHDADV+DLDGH      
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAE-VDDHHGHHGGGHGGHHGHDADVNDLDGH------

Query:  -----------------HHHHHDHDHDHGHHSHDHDAK
                         HH HHDH   HGHH HDHDAK
Subjt:  -----------------HHHHHDHDHDHGHHSHDHDAK

A0A6J1J1J4 histidine-rich glycoprotein-like2.0e-0849.01Show/hide
Query:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQH--------GHH----------DHDHGHHHHHDHDHHGHD--------------------H
        MAYSKTFLLL LLLALL+VSSHVSARLLEE+K  V++D H        G+H          DHDH  H H DHD H HD                    +
Subjt:  MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQH--------GHH----------DHDHGHHHHHDHDHHGHD--------------------H

Query:  EAEVDDHHGHHGGGHGGHHGHDADVNDLDGHHHHH-HDHDHDHGHHSHDHD
        + + DDH  H    H   H HDADVN LD HH  H HDHDHD   H HDHD
Subjt:  EAEVDDHHGHHGGGHGGHHGHDADVNDLDGHHHHH-HDHDHDHGHHSHDHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACTCTAAGACCTTTCTTCTTCTCGGCCTCCTCCTCGCTCTTCTTTTCGTCTCCTCTCATGTCTCGGCTCGTCTACTCGAGGAAGAGAAAGATGATGTAGAGAC
AGACCAACATGGACACCACGACCATGACCATGGACACCACCACCACCACGACCATGATCACCATGGCCATGACCATGAGGCTGAAGTCGATGATCACCATGGACACCACG
GTGGAGGGCATGGTGGACACCACGGCCATGATGCTGACGTGAATGACTTGGACGGTCATCATCACCACCACCATGATCATGACCACGACCACGGCCATCACAGTCACGAC
CATGATGCAAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
GTTGAAACAAGGATTACTTGTGGGTTTTTCTCAACCAAAATACTTTCTTTTTTACTAAATTTCCATTAATTCATTTCATTCATCCCCCAATACCTAACCCAGCCTCCAAC
CCTCTATAAATTGATAGTGATAATGCAATGTTTCAGCACCAAAAAAAGAATAGGCCAAGTTTAAGCAAAACACTTGCATTTCCAACTGAGAGCTTTTGTTAAACAAAAAT
GGCTTACTCTAAGACCTTTCTTCTTCTCGGCCTCCTCCTCGCTCTTCTTTTCGTCTCCTCTCATGTCTCGGCTCGTCTACTCGAGGAAGAGAAAGATGATGTAGAGACAG
ACCAACATGGACACCACGACCATGACCATGGACACCACCACCACCACGACCATGATCACCATGGCCATGACCATGAGGCTGAAGTCGATGATCACCATGGACACCACGGT
GGAGGGCATGGTGGACACCACGGCCATGATGCTGACGTGAATGACTTGGACGGTCATCATCACCACCACCATGATCATGACCACGACCACGGCCATCACAGTCACGACCA
TGATGCAAAGAATTAGAGACCTAAAACCTGCACCCTGTCTGCTACCGTATTGGTTAACAAAAGTATATTATTGTACAATGAAATAAAGTTTGTTTTGTGTGTGTTTTAAA
TTTAAATAAAGCAAAGATAGGTTGTATGAAATGCTAAAATATCATACTTTGTTTGGTATGTTGCAACTTATGATCTTTGTGGTTTTCATATATATGTAATGTCAAACTAT
ATATAAAGTTTATTTGATTTCCATACGGCTTAATTTTCAATATTATTAGGGTAAATTGCAATAGGTAG
Protein sequenceShow/hide protein sequence
MAYSKTFLLLGLLLALLFVSSHVSARLLEEEKDDVETDQHGHHDHDHGHHHHHDHDHHGHDHEAEVDDHHGHHGGGHGGHHGHDADVNDLDGHHHHHHDHDHDHGHHSHD
HDAKN