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Lsi04G020260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G020260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR-RELATED 3
Genome locationchr04:27353547..27353804
RNA-Seq ExpressionLsi04G020260
SyntenyLsi04G020260
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55081.1 hypothetical protein Csa_012463 [Cucumis sativus]2.1e-2586.9Show/hide
Query:  CRVKL-LFWVVVLILLLCSSISESRLLSSSSSSSSSSSSLNKKNELFVKNVKEMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
        C VKL LFW +VLILLLCSSISESRLLSS S S S SSS NKKNELFVKN +EMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  CRVKL-LFWVVVLILLLCSSISESRLLSSSSSSSSSSSSLNKKNELFVKNVKEMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0L4M1 Uncharacterized protein1.0e-2586.9Show/hide
Query:  CRVKL-LFWVVVLILLLCSSISESRLLSSSSSSSSSSSSLNKKNELFVKNVKEMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
        C VKL LFW +VLILLLCSSISESRLLSS S S S SSS NKKNELFVKN +EMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  CRVKL-LFWVVVLILLLCSSISESRLLSSSSSSSSSSSSLNKKNELFVKNVKEMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06225.1 CLAVATA3/ESR-RELATED 38.3e-0443.21Show/hide
Query:  VKLLFWVVVLILLLCSSISESRLLSSSSSSSSSSSSLNKKNELFVKNVKEMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
        +KL   +V+L++L  +S+ E R L +    S SS     + ELF + +KEM      E+  LG    SKRLSPGGPDPRHH
Subjt:  VKLLFWVVVLILLLCSSISESRLLSSSSSSSSSSSSLNKKNELFVKNVKEMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTCGTGTAAAGCTGTTGTTTTGGGTTGTGGTGTTGATATTGCTATTGTGTTCTTCCATTTCTGAAAGCCGTTTGCTTTCATCTTCTTCTTCTTCTTCATCATC
TTCTTCCTCTTTGAATAAGAAAAACGAATTATTTGTAAAGAATGTGAAAGAAATGTTGAAGTTTATCATTGAAGAGAAAGAGAAGCTTGGAAGGCATTTTGTGTCCAAAA
GACTCAGCCCTGGAGGACCTGATCCACGTCATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTCGTGTAAAGCTGTTGTTTTGGGTTGTGGTGTTGATATTGCTATTGTGTTCTTCCATTTCTGAAAGCCGTTTGCTTTCATCTTCTTCTTCTTCTTCATCATC
TTCTTCCTCTTTGAATAAGAAAAACGAATTATTTGTAAAGAATGTGAAAGAAATGTTGAAGTTTATCATTGAAGAGAAAGAGAAGCTTGGAAGGCATTTTGTGTCCAAAA
GACTCAGCCCTGGAGGACCTGATCCACGTCATCATTAG
Protein sequenceShow/hide protein sequence
MACRVKLLFWVVVLILLLCSSISESRLLSSSSSSSSSSSSLNKKNELFVKNVKEMLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH