CuGenDBv2

Gene ID	Lsi04G020410
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	E3 SUMO-protein ligase MMS21
Genome location	chr04:27502028..27505177
RNA-Seq Expression	Lsi04G020410
Synteny	Lsi04G020410
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0080038 - positive regulation of cytokinin-activated signaling pathway (biological process) GO:0008284 - positive regulation of cell population proliferation (biological process) GO:0010082 - regulation of root meristem growth (biological process) GO:0060250 - germ-line stem-cell niche homeostasis (biological process) GO:0016925 - protein sumoylation (biological process) GO:0048509 - regulation of meristem development (biological process) GO:0032876 - negative regulation of DNA endoreduplication (biological process) GO:0045931 - positive regulation of mitotic cell cycle (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0016874 - ligase activity (molecular function) GO:0061665 - SUMO ligase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR004181 - Zinc finger, MIZ-type IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR026846 - E3 SUMO-protein ligase Nse2 (Mms21)

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607898.1 E3 SUMO-protein ligase MMS21, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-117

89.11

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Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MAS S+S S+GVS RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLERDNQSRMVKELENSVVELLGTYE C+NFSSAIQSVGN YEP+EELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LDNEVAK+SENSSS+L NHSIIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTEL EPVRS ECKH+YEK AIMQYLKSK+SRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQPEKV+ DPFL IEIDELRK S+HS RIQDFTE+DAD
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

XP_008463706.1 PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis melo]

1.2e-116

88.71

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Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MASASDSRS+GV+GRIKSAATIMHSENQSLLAELRK LIMMKEIGVDLE++NQ++MVKELE S+VELL  YENCNNFSSAIQSVGN YEPKEELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LD+EVAK+S NSSS+  NH IIRQFREAIWNVHHAGQPM GEEQED+VMTSTQCNLLNVTCPLSGKPVTEL EPVRS ECKHIYEKAAIMQYL SKKSRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQP+KVV DPFL+IEIDELRKMSRHS RIQDFTELDAD
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

XP_022139610.1 E3 SUMO-protein ligase MMS21 isoform X1 [Momordica charantia]

2.6e-116

87.5

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Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MAS SD+RSS VSGRIKSAAT+MHSENQSLLAE+RK LIMMKEIG+DLERDNQS MVK+LEN+VVELL TYENC+NFSSAIQSVGN YEP+EELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LD+EVAK+SENSSS+L NHSIIR+FREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTEL +PVRSMECKH+YEK A+MQYL+SK SRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQPEKV PDPFL IEIDELRK SRHS RIQDFTELDA+
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

XP_023525588.1 E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo]

2.3e-117

89.11

Show/hide

Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MAS S+S S+GVS RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLERDNQSRMVKELENSVVELLGTYE C+NFSSAIQSVGN YEP+EELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LDNEVAK+SENSSS+L NHSIIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTEL EPVRS ECKH+YEK AIMQYLKSK+SRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQPEKV+ DPFL IEIDELRK S+HS RIQDFTE+DAD
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

XP_038897059.1 E3 SUMO-protein ligase MMS21 isoform X1 [Benincasa hispida]

6.6e-120

91.13

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Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MASASDSRS+GVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGV+LERDNQSRMVKELENSVVELL TYENCNNFS AIQSVGN YEPKEELTDF KL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LD+EVAK+S++SSS+L+NHSIIRQFREA+WNVHHAGQPMPGEE+EDIVMTSTQCNLLNVTCPLSGKPV EL EPVRS ECKH+YEKAAIMQYLKSKKSRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQ +KVVPDPFLQIEIDELRK+SRHS RIQDFTELDAD
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CLF9 E3 SUMO-protein ligase MMS21

5.6e-117

88.71

Show/hide

Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MASASDSRS+GV+GRIKSAATIMHSENQSLLAELRK LIMMKEIGVDLE++NQ++MVKELE S+VELL  YENCNNFSSAIQSVGN YEPKEELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LD+EVAK+S NSSS+  NH IIRQFREAIWNVHHAGQPM GEEQED+VMTSTQCNLLNVTCPLSGKPVTEL EPVRS ECKHIYEKAAIMQYL SKKSRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQP+KVV DPFL+IEIDELRKMSRHS RIQDFTELDAD
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

A0A5D3DWX9 E3 SUMO-protein ligase MMS21

5.6e-117

88.71

Show/hide

Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MASASDSRS+GV+GRIKSAATIMHSENQSLLAELRK LIMMKEIGVDLE++NQ++MVKELE S+VELL  YENCNNFSSAIQSVGN YEPKEELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LD+EVAK+S NSSS+  NH IIRQFREAIWNVHHAGQPM GEEQED+VMTSTQCNLLNVTCPLSGKPVTEL EPVRS ECKHIYEKAAIMQYL SKKSRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQP+KVV DPFL+IEIDELRKMSRHS RIQDFTELDAD
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

A0A6J1CCS6 E3 SUMO-protein ligase MMS21 isoform X1

1.3e-116

87.5

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Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MAS SD+RSS VSGRIKSAAT+MHSENQSLLAE+RK LIMMKEIG+DLERDNQS MVK+LEN+VVELL TYENC+NFSSAIQSVGN YEP+EELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LD+EVAK+SENSSS+L NHSIIR+FREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTEL +PVRSMECKH+YEK A+MQYL+SK SRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQPEKV PDPFL IEIDELRK SRHS RIQDFTELDA+
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

A0A6J1FRP6 E3 SUMO-protein ligase MMS21

1.3e-116

88.31

Show/hide

Query:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL
        MAS S+S S+GVS RIKSAATIM+SENQSLLAELRK+LIMMKEIGV+LERDNQSRMVKELENSVVELLGTYE C+NFSSAIQSVGN YEP+EELTDFEKL
Subjt:  MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKL

Query:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA
        LD+EVAK+SENSSS+L NHSIIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTEL EPVRS ECKH+YEK AIMQYLKSK+SRA
Subjt:  LDNEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRA

Query:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        QCPVAACPKMLQPEKV+ DPFL IEIDELRK S+HS RIQDFTE+DAD
Subjt:  QCPVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

A0A6J1IXZ2 E3 SUMO-protein ligase MMS21

8.2e-116

88.62

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Query:  SASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKLLD
        S S+S S+GVS RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLERDNQSRMVKELENSVVELL TYE C+NFSSAIQSVGN YEP+EELTDFEKLLD
Subjt:  SASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKLLD

Query:  NEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRAQC
        NEVAK+SENSSS+L NHSIIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTEL EPVRS ECKH+YEK AIMQYLKSK+SRAQC
Subjt:  NEVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRAQC

Query:  PVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD
        PVAACPKMLQPEKV+ DPFL IEIDELRK S+HS RIQDFTE+DAD
Subjt:  PVAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSARIQDFTELDAD

SwissProt top hits

e value

%identity

Alignment

Q8GYH7 E3 SUMO-protein ligase MMS21

2.8e-73

57.79

Show/hide

Query:  ASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKLLDN
        AS S S GV+GRI++A+ ++ S+N S LA++RKA+ MMK I V LE++NQ+  VK+LENSV ELL  + +CN+ S+AIQSV NRY+P E+LTDF+KLLD+
Subjt:  ASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKLLDN

Query:  EVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRAQCP
        E  KL    SS   N  ++RQFREA+WNVHHAG+PMPG++ EDIVMTSTQC LLN+TCPLSGKPVTEL +PVRSM+C+H+YEK+ I+ Y+ +  + A CP
Subjt:  EVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRAQCP

Query:  VAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSAR---IQDFTE
        VA C   LQ  KV+ D  L+ EI+E+R +++ S R   I+DFTE
Subjt:  VAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSAR---IQDFTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G15150.1 RING/U-box superfamily protein

2.0e-74

57.79

Show/hide

Query:  ASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKLLDN
        AS S S GV+GRI++A+ ++ S+N S LA++RKA+ MMK I V LE++NQ+  VK+LENSV ELL  + +CN+ S+AIQSV NRY+P E+LTDF+KLLD+
Subjt:  ASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKLLDN

Query:  EVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRAQCP
        E  KL    SS   N  ++RQFREA+WNVHHAG+PMPG++ EDIVMTSTQC LLN+TCPLSGKPVTEL +PVRSM+C+H+YEK+ I+ Y+ +  + A CP
Subjt:  EVAKLSENSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRAQCP

Query:  VAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSAR---IQDFTE
        VA C   LQ  KV+ D  L+ EI+E+R +++ S R   I+DFTE
Subjt:  VAACPKMLQPEKVVPDPFLQIEIDELRKMSRHSAR---IQDFTE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCATCCGCTTCCGATTCCCGTTCAAGCGGCGTTTCCGGTAGAATCAAATCCGCCGCCACTATTATGCACTCCGAGAATCAATCCCTCCTTGCCGAATTGCGGAAGGC
GCTGATTATGATGAAGGAGATTGGGGTGGATTTGGAGAGGGACAATCAGTCCAGGATGGTCAAGGAGCTTGAAAATTCTGTTGTCGAGCTGTTGGGTACTTATGAAAACT
GTAACAACTTTTCTTCTGCAATTCAGTCGGTTGGAAATAGATATGAACCAAAAGAAGAGTTAACAGATTTTGAGAAACTACTTGACAATGAAGTTGCAAAACTCAGCGAA
AATTCATCTTCAGATTTGCTGAACCATTCAATAATTCGGCAATTTAGAGAAGCCATTTGGAATGTTCATCATGCAGGACAACCGATGCCAGGTGAGGAGCAGGAGGACAT
TGTGATGACCAGTACTCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGAAGAACCTGTTCGCAGTATGGAATGCAAGCACATAT
ATGAAAAGGCAGCCATAATGCAGTACCTTAAATCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGCCTGTCCTAAGATGTTGCAGCCCGAAAAGGTTGTGCCTGATCCG
TTCTTACAGATTGAAATTGATGAACTGCGAAAAATGTCTAGGCATTCTGCAAGGATACAGGACTTCACAGAGCTTGATGCAGATTAG

mRNA sequence

Show/hide mRNA sequence

GGTTCTCCAAAACTCGGACCAGTTTGTTTCCCCAAGCGGGTATTCAATATTTCGCGCTTTAAAAGTTAAAATTCGAACCATCGCCCGAGGAGTTTCTGTTTCGGCAATCT
CTTCTTCAAAGGAATGGCATCCGCTTCCGATTCCCGTTCAAGCGGCGTTTCCGGTAGAATCAAATCCGCCGCCACTATTATGCACTCCGAGAATCAATCCCTCCTTGCCG
AATTGCGGAAGGCGCTGATTATGATGAAGGAGATTGGGGTGGATTTGGAGAGGGACAATCAGTCCAGGATGGTCAAGGAGCTTGAAAATTCTGTTGTCGAGCTGTTGGGT
ACTTATGAAAACTGTAACAACTTTTCTTCTGCAATTCAGTCGGTTGGAAATAGATATGAACCAAAAGAAGAGTTAACAGATTTTGAGAAACTACTTGACAATGAAGTTGC
AAAACTCAGCGAAAATTCATCTTCAGATTTGCTGAACCATTCAATAATTCGGCAATTTAGAGAAGCCATTTGGAATGTTCATCATGCAGGACAACCGATGCCAGGTGAGG
AGCAGGAGGACATTGTGATGACCAGTACTCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGAAGAACCTGTTCGCAGTATGGAA
TGCAAGCACATATATGAAAAGGCAGCCATAATGCAGTACCTTAAATCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGCCTGTCCTAAGATGTTGCAGCCCGAAAAGGT
TGTGCCTGATCCGTTCTTACAGATTGAAATTGATGAACTGCGAAAAATGTCTAGGCATTCTGCAAGGATACAGGACTTCACAGAGCTTGATGCAGATTAGCACCACTGAA
GTAGTTTCTATTCCTCTTTTTTGTTGTTTTTATTGTCATTGTCATCGTCGTCATTGTCTTCAGGGTCACTCTTTGGATCAAATGTTTTGCTTGGTAAGTTAAGCCAGTTG
GGGGGTGTATATGGTATCTATAGTTTGTCTATATTTTCTCTTCACAATGAGTTGAATGGAGAAATGTGGCTTCATTGACAAATTGCTATTGCCCTTTATATTTTGAGTTG
TTCTTTTCCTCCTGCGCCAGTGTAAATAACGTTTGTATTTGCAAACAAAATTTTGACTCTAAA

Protein sequence

Show/hide protein sequence

MASASDSRSSGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVDLERDNQSRMVKELENSVVELLGTYENCNNFSSAIQSVGNRYEPKEELTDFEKLLDNEVAKLSE
NSSSDLLNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELEEPVRSMECKHIYEKAAIMQYLKSKKSRAQCPVAACPKMLQPEKVVPDP
FLQIEIDELRKMSRHSARIQDFTELDAD

Lsi04G020410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome