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Lsi04G020630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G020630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:27746734..27750291
RNA-Seq ExpressionLsi04G020630
SyntenyLsi04G020630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066826.1 putative chilling-induced protein [Cucumis melo var. makuwa]6.2e-0979.17Show/hide
Query:  IVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED
        +V  GAV S VEVAYDATKGT E VKD VIAEANENV+DTTEYRSME+
Subjt:  IVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED

KAG6607884.1 hypothetical protein SDJN03_01226, partial [Cucurbita argyrosperma subsp. sororia]5.5e-0566.67Show/hide
Query:  GGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED
        GG   S  E AYDA  G AE VK+ VIAEANENV+DT+EYRSME+
Subjt:  GGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED

XP_004146059.1 uncharacterized protein LOC101215612 [Cucumis sativus]8.4e-1472.46Show/hide
Query:  VDTREESGLSGVKAGKLVAATIVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED
        VDT EE  ++G KA +L+ A +V  G VRS VEVAYDATKGTAE VKD VIAEANENVVDTTEYRSME+
Subjt:  VDTREESGLSGVKAGKLVAATIVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED

XP_038899913.1 uncharacterized protein LOC120087104 [Benincasa hispida]1.8e-0862.12Show/hide
Query:  EESGLSGVKA-GKLVAATIVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED
        EES +   +A  + + A + G GA+ S+VEVAYD+TKGTAE VKD  IAEANENVVDT EYRSM D
Subjt:  EESGLSGVKA-GKLVAATIVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED

TrEMBL top hitse value%identityAlignment
A0A0A0L055 Uncharacterized protein4.1e-1472.46Show/hide
Query:  VDTREESGLSGVKAGKLVAATIVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED
        VDT EE  ++G KA +L+ A +V  G VRS VEVAYDATKGTAE VKD VIAEANENVVDTTEYRSME+
Subjt:  VDTREESGLSGVKAGKLVAATIVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED

A0A5D3DWB9 Putative chilling-induced protein3.0e-0979.17Show/hide
Query:  IVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED
        +V  GAV S VEVAYDATKGT E VKD VIAEANENV+DTTEYRSME+
Subjt:  IVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTCGTACACGTCAGGTCGTTGATACGCGAGAGGAGAGCGGCTTGAGTGGAGTGAAAGCAGGGAAGCTGGTAGCAGCGACGATCGTCGGAGGAGGAGCGGTGAG
AAGCATGGTGGAGGTGGCCTATGATGCAACAAAAGGGACAGCGGAGAATGTGAAGGACATAGTTATTGCAGAGGCGAATGAAAATGTGGTGGACACTACTGAGTACAGAA
GCATGGAGGATAAGGCTAGAACCACAATTGGTGGAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAATTCGTACACGTCAGGTCGTTGATACGCGAGAGGAGAGCGGCTTGAGTGGAGTGAAAGCAGGGAAGCTGGTAGCAGCGACGATCGTCGGAGGAGGAGCGGTGAG
AAGCATGGTGGAGGTGGCCTATGATGCAACAAAAGGGACAGCGGAGAATGTGAAGGACATAGTTATTGCAGAGGCGAATGAAAATGTGGTGGACACTACTGAGTACAGAA
GCATGGAGGATAAGGCTAGAACCACAATTGGTGGAATCTGA
Protein sequenceShow/hide protein sequence
MIIRTRQVVDTREESGLSGVKAGKLVAATIVGGGAVRSMVEVAYDATKGTAENVKDIVIAEANENVVDTTEYRSMEDKARTTIGGI