; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G020940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G020940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionIQ domain-containing protein
Genome locationchr04:28119934..28123426
RNA-Seq ExpressionLsi04G020940
SyntenyLsi04G020940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145517.1 uncharacterized protein LOC101216814 isoform X2 [Cucumis sativus]2.9e-5078.95Show/hide
Query:  FLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVML-------EESSSTLT
        F GAA NES AGN TKRLRRKKTFAELKEEES+LLKEK+HLKMELATLRAN EEQRAKNESLKKMKVD N KYTEKF TNSN+M+       EESSSTLT
Subjt:  FLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVML-------EESSSTLT

Query:  HQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        HQRESS+  T+P+T   +GSGS EAQSQKN KSTEEDCVFLLPDLN  PSED
Subjt:  HQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

XP_022937356.1 uncharacterized protein LOC111443668 [Cucurbita moschata]4.6e-5674.16Show/hide
Query:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD
        G  P   + G  A  R   LL      + A  F GA ANES AG  TKRLRRKKTFAELKEEE+ LLKEKLHLKMELATL+A+FEEQR+KNESLKKMKVD
Subjt:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD

Query:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESS-NIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        FNLKY EKFSTNSN+M EESSSTLTHQRESS NIET P T+PFTGSGS EAQSQK SKSTEED VFLLPDLN  PSED
Subjt:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESS-NIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

XP_022976190.1 uncharacterized protein LOC111476653 [Cucurbita maxima]5.5e-5774.58Show/hide
Query:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD
        G  P   + G  A  R   LL      + A  F GA ANES A   TKRLRRKKTFAELKEEE+ LLKEKLHLKMELATL+A+FEEQR KNESLKKMKVD
Subjt:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD

Query:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        FNLKY EKF+TNSN+M EESSSTLTHQRESSNIET P TLPFTGSGS EAQSQK SKSTEED VFLLPDLN TPSED
Subjt:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

XP_023536611.1 uncharacterized protein LOC111797733 [Cucurbita pepo subsp. pepo]1.9e-5474.16Show/hide
Query:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD
        G  P   + G  A  R   LL      + A  F GA ANES A   TKRLRRKKTFAELKEEE+ LLKEKLHLKMELATL+A+FEEQRAKNESLKKMKVD
Subjt:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD

Query:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESS-NIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
         NLKY EKFSTNSN+M EESSSTLTHQRESS NIET   TLPFTGSGS EAQSQK SKSTEED VFLLPDLN TPSED
Subjt:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESS-NIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

XP_038897737.1 uncharacterized protein LOC120085676 [Benincasa hispida]8.4e-5888.44Show/hide
Query:  FLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVMLEESSSTLTHQRESSN
        F GAA NES AGN TKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSN+M EES+STLTHQRESSN
Subjt:  FLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVMLEESSSTLTHQRESSN

Query:  IETIPYTLPFT--GSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        IE    TLPFT  GSGS EAQSQKN KSTEEDC FLLPDLN TPSED
Subjt:  IETIPYTLPFT--GSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

TrEMBL top hitse value%identityAlignment
A0A0A0L0G9 Uncharacterized protein1.4e-5078.95Show/hide
Query:  FLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVML-------EESSSTLT
        F GAA NES AGN TKRLRRKKTFAELKEEES+LLKEK+HLKMELATLRAN EEQRAKNESLKKMKVD N KYTEKF TNSN+M+       EESSSTLT
Subjt:  FLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVML-------EESSSTLT

Query:  HQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        HQRESS+  T+P+T   +GSGS EAQSQKN KSTEEDCVFLLPDLN  PSED
Subjt:  HQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

A0A1S3BUC4 uncharacterized protein LOC103493773 isoform X21.0e-4878.52Show/hide
Query:  LGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVML-----EESSSTLTHQR
        L AA NES AGN TKRLRRKKTFAELKEEES+LLKEK+HLKMELATLRAN EEQRAKNE LKKMKVD NLKY EKFS NSN+M+     EESSSTLTHQR
Subjt:  LGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVML-----EESSSTLTHQR

Query:  ESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        ESS+  T+P+T   +GSGS +AQSQKN KSTEEDCVFLLPDLN  PSED
Subjt:  ESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

A0A6J1BQS2 uncharacterized protein LOC1110049284.1e-5082.43Show/hide
Query:  LGAAANESTA--GNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMK--VDFNLKYTEKFSTNSNVMLEESSSTLTHQRE
        LG AANES A    ATKRLRRKKTFAELKEEE MLLKEKLHLK ELA+LRA FEEQRAKNESLKKMK  VDFNLKYTEKFSTNSN M EE+SSTLTHQRE
Subjt:  LGAAANESTA--GNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMK--VDFNLKYTEKFSTNSNVMLEESSSTLTHQRE

Query:  SSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        SSN +TIP TLPFTGSGS EAQSQK SKS+E++CVF+LPDLN  PSED
Subjt:  SSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

A0A6J1FA47 uncharacterized protein LOC1114436682.2e-5674.16Show/hide
Query:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD
        G  P   + G  A  R   LL      + A  F GA ANES AG  TKRLRRKKTFAELKEEE+ LLKEKLHLKMELATL+A+FEEQR+KNESLKKMKVD
Subjt:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD

Query:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESS-NIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        FNLKY EKFSTNSN+M EESSSTLTHQRESS NIET P T+PFTGSGS EAQSQK SKSTEED VFLLPDLN  PSED
Subjt:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESS-NIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

A0A6J1IIT2 uncharacterized protein LOC1114766532.7e-5774.58Show/hide
Query:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD
        G  P   + G  A  R   LL      + A  F GA ANES A   TKRLRRKKTFAELKEEE+ LLKEKLHLKMELATL+A+FEEQR KNESLKKMKVD
Subjt:  GRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD

Query:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        FNLKY EKF+TNSN+M EESSSTLTHQRESSNIET P TLPFTGSGS EAQSQK SKSTEED VFLLPDLN TPSED
Subjt:  FNLKYTEKFSTNSNVMLEESSSTLTHQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTPSED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15800.1 unknown protein3.8e-0847.37Show/hide
Query:  KRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKF-STNSNVMLEESSS
        KR R+KKT A+LKEEES+LLKE+  L+ ELAT++   ++QRA+NESLKK++ +        F   + N+ L+ +SS
Subjt:  KRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKF-STNSNVMLEESSS

AT1G80610.1 unknown protein2.7e-0955.38Show/hide
Query:  AAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD
        +A   +T     KR R+KKT AELKEEE MLLKE   LK ELA +R   E+QRA+N +LKKMK +
Subjt:  AAANESTAGNATKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVD

AT4G32030.1 unknown protein8.3e-1135.11Show/hide
Query:  TKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVMLEESSSTLTHQRESSNIETIPYTLPFTGSG
        +KRL+++K+  ELK EE++ LKE+L L+ E+A+LRA F+EQ  +N+ LK++K+D           NS  +  +    L  + +   ++         GS 
Subjt:  TKRLRRKKTFAELKEEESMLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVMLEESSSTLTHQRESSNIETIPYTLPFTGSG

Query:  SCEAQSQKNSKSTEEDCVFLLPDLNRTPSED
        SC     K S S  +   F+LPDLN  PSE+
Subjt:  SCEAQSQKNSKSTEEDCVFLLPDLNRTPSED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTGGCGTACGATTCTGGTAAATGCAAATTTGGGGTCATATTTGTTTCCCATTGGGAGGAGAGGGAGGAGCATTATGGACGTTTCGAGGTTAATTTGGAGCTTTTG
GAAGTTTAATCGAGCATCCAGACTTCACGGGAGGGGTCCGGACCGAAACATTCCCGGGTGTAGCGCCGTGCGCAGAGAAATGGGCTTGTTATTGTTCCAAATTTTGTGCT
ATTTTGCCTTTTTTTTCCTTGGTGCTGCTGCAAATGAATCGACAGCTGGTAATGCTACAAAGAGGTTAAGACGAAAGAAGACATTCGCTGAACTTAAGGAAGAGGAAAGC
ATGCTTTTGAAGGAGAAACTTCATCTTAAAATGGAATTGGCCACTCTACGGGCAAACTTCGAAGAACAAAGAGCCAAGAATGAAAGTTTGAAGAAAATGAAGGTGGATTT
CAACTTAAAATACACAGAGAAATTCAGTACAAACTCCAATGTAATGCTAGAGGAATCTTCATCCACACTAACCCATCAAAGGGAAAGCTCTAACATTGAAACAATTCCTT
ACACATTACCATTCACAGGATCAGGTTCTTGCGAGGCTCAATCACAGAAGAATAGCAAATCAACCGAAGAAGATTGTGTCTTTCTCTTACCGGATTTAAATAGGACACCT
TCAGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTGGCGTACGATTCTGGTAAATGCAAATTTGGGGTCATATTTGTTTCCCATTGGGAGGAGAGGGAGGAGCATTATGGACGTTTCGAGGTTAATTTGGAGCTTTTG
GAAGTTTAATCGAGCATCCAGACTTCACGGGAGGGGTCCGGACCGAAACATTCCCGGGTGTAGCGCCGTGCGCAGAGAAATGGGCTTGTTATTGTTCCAAATTTTGTGCT
ATTTTGCCTTTTTTTTCCTTGGTGCTGCTGCAAATGAATCGACAGCTGGTAATGCTACAAAGAGGTTAAGACGAAAGAAGACATTCGCTGAACTTAAGGAAGAGGAAAGC
ATGCTTTTGAAGGAGAAACTTCATCTTAAAATGGAATTGGCCACTCTACGGGCAAACTTCGAAGAACAAAGAGCCAAGAATGAAAGTTTGAAGAAAATGAAGGTGGATTT
CAACTTAAAATACACAGAGAAATTCAGTACAAACTCCAATGTAATGCTAGAGGAATCTTCATCCACACTAACCCATCAAAGGGAAAGCTCTAACATTGAAACAATTCCTT
ACACATTACCATTCACAGGATCAGGTTCTTGCGAGGCTCAATCACAGAAGAATAGCAAATCAACCGAAGAAGATTGTGTCTTTCTCTTACCGGATTTAAATAGGACACCT
TCAGAGGATTGACTAAGGTGAAATTACATTGATTCTTGTTCTCGCTCTCGTTCTCGTTCTCTAATATGACATGGTTGAAGGATTCTGTTGATTTAAACCTGGAAGTCACA
GGTAGTAAAGTCATGAGCCCCAATGACTCTACAATTTGGTGATGGCAAAAAAGTTTGCTGTCTTGTAGAATGCCCAACCAGACTGTTATATTAGCATTTGTTAATTCCTA
TGTTCTACATTTTTTTTTCTTTTCTTGAAGGCCTTTTGGTGAATCCCTCTAGAATGGTGTAGGTTTGATTCATTCGTTGTAGCGTTTATTATAGGTACATAGTCACTGAA
TTTGTTTGTTATGACTTTGTTATAAAAAGGAATTTTTTGGGCATTTCCACTTTACTGCGCCTCCCTTCTTTTAGTGCATTCTTACTCATTATGTTGACACAAAAGTGCCT
TAATTCAAAGCATTAGTTTAATTTGATTAGAATAAGTGTTAAATCACACCAAAAGCCAAGGGGTCGTGAGTTCAATTTATAGTGACCACTTACCTAAGATTAAATATCCT
ACAGGTTTCCTTGACACCCA
Protein sequenceShow/hide protein sequence
MMWRTILVNANLGSYLFPIGRRGRSIMDVSRLIWSFWKFNRASRLHGRGPDRNIPGCSAVRREMGLLLFQILCYFAFFFLGAAANESTAGNATKRLRRKKTFAELKEEES
MLLKEKLHLKMELATLRANFEEQRAKNESLKKMKVDFNLKYTEKFSTNSNVMLEESSSTLTHQRESSNIETIPYTLPFTGSGSCEAQSQKNSKSTEEDCVFLLPDLNRTP
SED