; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G021080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G021080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBeta-1,3-N-Acetylglucosaminyltransferase family protein
Genome locationchr04:28233197..28234734
RNA-Seq ExpressionLsi04G021080
SyntenyLsi04G021080
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063321.1 TPD1 protein-like protein 1A-like [Cucumis melo var. makuwa]4.4e-5988.98Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLSTMIAAI+IL+LSFINEG AAGSCSLDTINIGTQRSGRE+GGQPEWNVQ+INNC+CPQKQI+LSC GFQT+EPVDPSILSKQRD CLLINGGIVQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECPT
        GSSVSFSYAWDPP IM PRFSV  CPT
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECPT

XP_022141679.1 uncharacterized protein LOC111011980 [Momordica charantia]1.5e-5687.3Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLSTMIAAILILILSFIN+G A G+CSLDTINIGT+RSGRE+GGQPEWNVQVINNC+CPQKQIVLSCPGFQT EPV PSILSKQ DTCLLING  VQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECP
         +SVSFSYAWDPPFIMFPRFSV +CP
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECP

XP_022937408.1 uncharacterized protein LOC111443708 [Cucurbita moschata]2.4e-5787.4Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLS MIAAILIL LSFINEGF A SCSLDTINIGTQRSGR +GGQPEWNVQVINNC+CPQKQIVLSCPGFQTVEPVDPSI+SKQ D C LINGGIVQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECPT
        GSSV FSYAWDPPFI+FPRFSV +C T
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECPT

XP_022976215.1 uncharacterized protein LOC111476671 [Cucurbita maxima]9.7e-5988.98Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLS MIAAILIL LSFINEGF AGSCSLDTINIGTQRSGR +GGQPEWNVQVINNC+CPQKQIVLSCPGFQTVEPVDPSI+SKQ D CLLINGGIVQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECPT
        GSSV FSYAWDPPFI+FPRFSV +C T
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECPT

XP_038899927.1 uncharacterized protein LOC120087115 [Benincasa hispida]2.3e-6091.34Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINL TMIAAI IL LSFINEG AAGSCSLDTINIGTQRSGRE+GGQPEWNVQVINNCNCPQKQIVLSCPGFQT+EPVDPSILSKQRDTCLLINGG VQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECPT
        GSSVSFSYAWDPP IMFPR SV +CPT
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECPT

TrEMBL top hitse value%identityAlignment
A0A5A7VC88 TPD1 protein-like protein 1A-like2.1e-5988.98Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLSTMIAAI+IL+LSFINEG AAGSCSLDTINIGTQRSGRE+GGQPEWNVQ+INNC+CPQKQI+LSC GFQT+EPVDPSILSKQRD CLLINGGIVQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECPT
        GSSVSFSYAWDPP IM PRFSV  CPT
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECPT

A0A5D3E811 TPD1 protein-like protein 1A-like9.8e-5789.26Show/hide
Query:  MIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSF
        MIAAI+IL+LSFINEG AAGSCSLDTINIGTQRSGRE+GGQPEWNVQVINNC+CPQKQI+LSC GFQT+EPVDPSILSKQRD CLLINGGIVQPGSSVSF
Subjt:  MIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSF

Query:  SYAWDPPFIMFPRFSVPECPT
        SYAWDPP IM PRFSV  CPT
Subjt:  SYAWDPPFIMFPRFSVPECPT

A0A6J1CJF7 uncharacterized protein LOC1110119807.5e-5787.3Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLSTMIAAILILILSFIN+G A G+CSLDTINIGT+RSGRE+GGQPEWNVQVINNC+CPQKQIVLSCPGFQT EPV PSILSKQ DTCLLING  VQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECP
         +SVSFSYAWDPPFIMFPRFSV +CP
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECP

A0A6J1FFZ8 uncharacterized protein LOC1114437081.2e-5787.4Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLS MIAAILIL LSFINEGF A SCSLDTINIGTQRSGR +GGQPEWNVQVINNC+CPQKQIVLSCPGFQTVEPVDPSI+SKQ D C LINGGIVQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECPT
        GSSV FSYAWDPPFI+FPRFSV +C T
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECPT

A0A6J1IIV5 uncharacterized protein LOC1114766714.7e-5988.98Show/hide
Query:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP
        MINLS MIAAILIL LSFINEGF AGSCSLDTINIGTQRSGR +GGQPEWNVQVINNC+CPQKQIVLSCPGFQTVEPVDPSI+SKQ D CLLINGGIVQP
Subjt:  MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQP

Query:  GSSVSFSYAWDPPFIMFPRFSVPECPT
        GSSV FSYAWDPPFI+FPRFSV +C T
Subjt:  GSSVSFSYAWDPPFIMFPRFSVPECPT

SwissProt top hitse value%identityAlignment
Q1G3T1 TPD1 protein homolog 19.9e-0632.94Show/hide
Query:  CSLDTINIGTQRSGREVGGQPEWNVQVINNC--NCPQKQIVLSCPGFQTVEPVDPSILSK-QRDTCLLINGGIVQPGSSVSFSYA
        CS D I +    +     G P + V++ N+C  +C   +I +SC  F +V  V+P +  +   D CL+ +G  + PG S+SF YA
Subjt:  CSLDTINIGTQRSGREVGGQPEWNVQVINNC--NCPQKQIVLSCPGFQTVEPVDPSILSK-QRDTCLLINGGIVQPGSSVSFSYA

Arabidopsis top hitse value%identityAlignment
AT1G32583.1 FUNCTIONS IN: molecular_function unknown7.0e-0732.94Show/hide
Query:  CSLDTINIGTQRSGREVGGQPEWNVQVINNC--NCPQKQIVLSCPGFQTVEPVDPSILSK-QRDTCLLINGGIVQPGSSVSFSYA
        CS D I +    +     G P + V++ N+C  +C   +I +SC  F +V  V+P +  +   D CL+ +G  + PG S+SF YA
Subjt:  CSLDTINIGTQRSGREVGGQPEWNVQVINNC--NCPQKQIVLSCPGFQTVEPVDPSILSK-QRDTCLLINGGIVQPGSSVSFSYA

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.4e-2346.08Show/hide
Query:  ILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAW
        +++L+LS ++ G     C+   I IG  R+GRE+GGQPEW V VIN CNC QK + LSC GF   +PV P +L  Q +TCL+I G  +  G++  F+YA 
Subjt:  ILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAW

Query:  DP
         P
Subjt:  DP

AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.6e-1737.86Show/hide
Query:  LILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAWD
        L+L+ +F+ +G+   S SL+++++   ++G  V  +PEW V+V+N+  C      LSC  F++V P+D  +LSK  DTCLL NG  +     +SF Y WD
Subjt:  LILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAWD

Query:  PPF
          F
Subjt:  PPF

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein8.0e-1940.52Show/hide
Query:  LILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNC-NCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAW
        L+L L+F+N+G+  G C L+ +++   ++G+ V  +PEW V+V N C NC  +   LSC GFQ+V PV  S+LSK  D CLL  G  + P     F+Y W
Subjt:  LILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNC-NCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAW

Query:  DPPFIMFPRFSVPECP
        D  F +     V  CP
Subjt:  DPPFIMFPRFSVPECP

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.3e-1839.42Show/hide
Query:  LILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNC-NCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAW
        L+L L+F+N+G+  G CSL+++++   ++G+ V  +PEW V+V N C NC  +   L C GF +V P+D S+L K  D CL+  G  + P   + F Y W
Subjt:  LILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNC-NCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAW

Query:  DPPF
        D  F
Subjt:  DPPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAACCTCTCCACCATGATTGCAGCAATCCTCATCCTAATCCTAAGTTTCATCAACGAAGGGTTTGCTGCTGGAAGCTGCAGTTTGGATACCATTAACATAGGAAC
ACAAAGAAGCGGAAGGGAGGTTGGAGGGCAACCTGAATGGAACGTGCAAGTGATCAACAACTGCAATTGTCCTCAGAAGCAGATCGTCTTGTCCTGCCCAGGGTTTCAGA
CAGTTGAACCCGTTGATCCGTCGATTCTGTCAAAGCAAAGGGACACTTGCCTTCTCATAAACGGAGGAATTGTACAACCTGGTTCTTCAGTTTCATTTTCCTATGCTTGG
GATCCCCCTTTCATCATGTTCCCTCGTTTCTCTGTTCCTGAGTGTCCTACCTGA
mRNA sequenceShow/hide mRNA sequence
CAATGAGGAAAGCCATTCAAAATACAGATATGAAAACACTGACATACTATAATTTCCAAGATAAAGTAATCAAAAAAACAAAGAAGTTGATTTCTAAACCCACTTATCTC
AAAAGCACTGCCTGCCAGCAAAAAATTCCCTTCAGCTATGATCAACCTCTCCACCATGATTGCAGCAATCCTCATCCTAATCCTAAGTTTCATCAACGAAGGGTTTGCTG
CTGGAAGCTGCAGTTTGGATACCATTAACATAGGAACACAAAGAAGCGGAAGGGAGGTTGGAGGGCAACCTGAATGGAACGTGCAAGTGATCAACAACTGCAATTGTCCT
CAGAAGCAGATCGTCTTGTCCTGCCCAGGGTTTCAGACAGTTGAACCCGTTGATCCGTCGATTCTGTCAAAGCAAAGGGACACTTGCCTTCTCATAAACGGAGGAATTGT
ACAACCTGGTTCTTCAGTTTCATTTTCCTATGCTTGGGATCCCCCTTTCATCATGTTCCCTCGTTTCTCTGTTCCTGAGTGTCCTACCTGAAGCACCAAAACCAATTTTT
TTTAATTTAAAAAAACGGTTATCAATTTAGTCTCAGTTAATATTGTAGTTAAGAAAAAAAAAATTGAAAAATAATCGCTCCTTTAGTATGAATGGAATTATAATCGATTA
TAGGTGATGTCTTATGCCCCCATATTTCTTGAGGTTGTTTCCTTCACCTGATTGATCTACTAAAGATGGGCCTAGACAGCATATACTTATTTGGTACAAGGGAGAAATTT
TACCTGTAGAGAAGGTCTTCTCTCTACACAAATGTTGCCATCCTCACTTGAGTTTGACAATAGAATAGAACCTGCCTCTCTGTAAGATTAATATGATATAAGCAACTTGT
ATAGCTTGTATAACTTGTATTTGTACAGCATGATTTTGTTAAGAACCAAGGCAGTATGGGTTACCTTTATCCCATATTGGTTAGAATGGGATGACCATTATTACGTACTT
AAGCACCTTGGAGAACCACACTCCAAAAGCTAGCTATTGAGATGAGAGAGTCAAGCCACTTAAATACCACATTGGTCATCTCATTCTAACCGATGTGGGACAAAGATAAC
TCATACTACCTTGGTTCCCAACAATACTCTATTCTCGGAAATCTGATGTCCTGGTGACTAGACCGATAGTACTTCACTTGGAAATATCTAGTCAAAACCCTCTGTCGGTG
CTCCTCTCCAAAATGTCAACAACCGACTCTTATACCATTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAATCATCTATTGAGGTGAGAGAGTCAAGCCACT
TAAGTTCCTAACAATGGTCATCCTATTCTACCCGATGTGGGACAAAGGTAACCCATACTACCTTGGTTCCTAACAGATTTCTCATTCAGGGTTTGTGTCTGTTGG
Protein sequenceShow/hide protein sequence
MINLSTMIAAILILILSFINEGFAAGSCSLDTINIGTQRSGREVGGQPEWNVQVINNCNCPQKQIVLSCPGFQTVEPVDPSILSKQRDTCLLINGGIVQPGSSVSFSYAW
DPPFIMFPRFSVPECPT