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Lsi04G021100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G021100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBeta-1,3-N-Acetylglucosaminyltransferase family protein, putative
Genome locationchr04:28244735..28245918
RNA-Seq ExpressionLsi04G021100
SyntenyLsi04G021100
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60075.1 hypothetical protein Csa_001952 [Cucumis sativus]2.3e-4977.87Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        MVASI +  +LFFFCLLSKGNCEC++NDI ISQ+T+G +V GKQ WRATI N C+CSQ S+K DCNGFNTVEKVDESILMVAGSVCLVN+GQP+F SSPI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYAWDNAFPF PL SQ++CS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

XP_022137438.1 uncharacterized protein LOC111008881 isoform X1 [Momordica charantia]1.1e-3257.85Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        M  S+K  CVL  F LL KGNC+C++ +I +SQ+ +G+QV GK  WR TI+NNC CSQ S+ LDC G+ TVE VD +IL  A +VCL NSG+P+ +S+PI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISC
        SFTYAWDN +PF PLSS   C
Subjt:  SFTYAWDNAFPFKPLSSQISC

XP_022141896.1 uncharacterized protein At1g05835-like [Momordica charantia]4.1e-3862.3Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        MVASIK LC LFFFCLLSKGNC+C+L DI+I Q  +  +V G+Q W  T++NNC+CSQ ++KLDC GF++ E VD S L   G+ CL+N G+P+F+S PI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYAWD  FPFKPLSSQ++CS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

XP_030926576.1 TPD1 protein homolog 1-like [Quercus lobata]7.9e-3459.02Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        M   IKFLCVLF    + KGNC+CTL+ +TI Q+ +G  V+ K VW  TI N C+CSQS LKL CNGF TV+ VD S+L  +G+ CLVN+G PV  SS +
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYAWD +F F+PLSSQI+CS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

XP_038896903.1 TPD1 protein homolog 1-like [Benincasa hispida]2.7e-5079.51Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        MVASIKFLCVLFFFCLLSKG  +C++NDITISQ+T+G +V GKQ WRATITNNC+CSQ S+K DCNGFN+VEKVDESILMVAGS CLVN+GQP+F+S+PI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYAWDNAF FKPL SQ++CS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

TrEMBL top hitse value%identityAlignment
A0A0A0LDN0 Uncharacterized protein1.1e-4977.87Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        MVASI +  +LFFFCLLSKGNCEC++NDI ISQ+T+G +V GKQ WRATI N C+CSQ S+K DCNGFNTVEKVDESILMVAGSVCLVN+GQP+F SSPI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYAWDNAFPF PL SQ++CS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

A0A0A0LEA1 Uncharacterized protein8.2e-5384.43Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        MVASIKF+CVLFFFCLLSKGNCEC LNDI ISQTT+G+ V+GKQVW+ATITNNCIC QSSLKLDCNGFNTV+ VD SIL V+GSVCLVN GQP+F+S+PI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYA DNAFPFKPLSSQISCS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

A0A6J1CAC8 uncharacterized protein LOC111008881 isoform X15.5e-3357.85Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        M  S+K  CVL  F LL KGNC+C++ +I +SQ+ +G+QV GK  WR TI+NNC CSQ S+ LDC G+ TVE VD +IL  A +VCL NSG+P+ +S+PI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISC
        SFTYAWDN +PF PLSS   C
Subjt:  SFTYAWDNAFPFKPLSSQISC

A0A6J1CKK7 uncharacterized protein At1g05835-like2.0e-3862.3Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        MVASIK LC LFFFCLLSKGNC+C+L DI+I Q  +  +V G+Q W  T++NNC+CSQ ++KLDC GF++ E VD S L   G+ CL+N G+P+F+S PI
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYAWD  FPFKPLSSQ++CS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

A0A7N2M2J3 Uncharacterized protein3.8e-3459.02Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        M   IKFLCVLF    + KGNC+CTL+ +TI Q+ +G  V+ K VW  TI N C+CSQS LKL CNGF TV+ VD S+L  +G+ CLVN+G PV  SS +
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
        SFTYAWD +F F+PLSSQI+CS
Subjt:  SFTYAWDNAFPFKPLSSQISCS

SwissProt top hitse value%identityAlignment
Q6TLJ2 Protein TAPETUM DETERMINANT 18.0e-0527.18Show/hide
Query:  ECTLNDITISQTTSGAQVKGKQVWRATITNNCI--CSQSSLKLDCNGFNTVEKVDESIL-MVAGSVCLVNSGQPVFESSPISFTYAWDNAFPFKPLSSQI
        +C   DI ++Q  +     G   +   ITN C+  C  S + ++C  F++ + ++  +   +    CLVN+G+P+   S +SF YA  N FP+    + +
Subjt:  ECTLNDITISQTTSGAQVKGKQVWRATITNNCI--CSQSSLKLDCNGFNTVEKVDESIL-MVAGSVCLVNSGQPVFESSPISFTYAWDNAFPFKPLSSQI

Query:  SCS
        +C+
Subjt:  SCS

Arabidopsis top hitse value%identityAlignment
AT4G24972.1 tapetum determinant 15.7e-0627.18Show/hide
Query:  ECTLNDITISQTTSGAQVKGKQVWRATITNNCI--CSQSSLKLDCNGFNTVEKVDESIL-MVAGSVCLVNSGQPVFESSPISFTYAWDNAFPFKPLSSQI
        +C   DI ++Q  +     G   +   ITN C+  C  S + ++C  F++ + ++  +   +    CLVN+G+P+   S +SF YA  N FP+    + +
Subjt:  ECTLNDITISQTTSGAQVKGKQVWRATITNNCI--CSQSSLKLDCNGFNTVEKVDESIL-MVAGSVCLVNSGQPVFESSPISFTYAWDNAFPFKPLSSQI

Query:  SCS
        +C+
Subjt:  SCS

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.4e-1229.51Show/hide
Query:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI
        M  ++K   V+    ++S G C CT   I I    +G ++ G+  W+ T+ N C C Q  + L C GF   + V   +L   G+ CL+  G  +   +  
Subjt:  MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPI

Query:  SFTYAWDNAFPFKPLSSQISCS
         FTYA    + F+P+ S++  S
Subjt:  SFTYAWDNAFPFKPLSSQISCS

AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.1e-1229.41Show/hide
Query:  KFLCVLFFFCLLSK--GNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPISFT
        KFLC++  F  +++  G+   +L  +++ Q+ +G  V+ K  W   + N+  C  +   L C  F +V  +D  +L  +G  CL+ +G  + +   ISF 
Subjt:  KFLCVLFFFCLLSK--GNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPISFT

Query:  YAWDNAFPFKPLSSQISCS
        Y WD +F  K +   I+CS
Subjt:  YAWDNAFPFKPLSSQISCS

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.7e-1634.19Show/hide
Query:  KFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNC-ICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPISFTY
        K LC++ F   +++G  +C LN +++ Q+ +G  V+ K  W   +TN C  C     KL C GF +V  V  S+L  +G +CL+N+G  +F      F Y
Subjt:  KFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNC-ICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPISFTY

Query:  AWDNAFPFKPLSSQISC
         WD +F  K +   I C
Subjt:  AWDNAFPFKPLSSQISC

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.1e-1734.19Show/hide
Query:  KFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNC-ICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPISFTY
        K LC++ F   +++G  +C+LN +++ Q+ +G  V+ K  W   +TN C  C   + +L C GFN+V  +D S+L+ +G  CLVN+G+ +     I F Y
Subjt:  KFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNC-ICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPISFTY

Query:  AWDNAFPFKPLSSQISC
         WD +F  K +   + C
Subjt:  AWDNAFPFKPLSSQISC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCCTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGAAATTGTGAATGCACGTTGAATGACATTACAATAAGCCAAACTACAAGTGG
AGCTCAAGTGAAGGGGAAGCAAGTATGGAGAGCTACAATTACAAACAATTGTATTTGTTCTCAATCAAGTTTGAAATTGGATTGCAATGGATTTAACACAGTTGAGAAAG
TTGATGAATCAATCTTAATGGTTGCTGGCTCAGTTTGTTTGGTTAACAGTGGTCAGCCAGTCTTCGAATCAAGCCCAATTTCTTTCACTTATGCTTGGGATAATGCCTTT
CCTTTCAAGCCCCTCTCCTCTCAAATTTCTTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCCTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGAAATTGTGAATGCACGTTGAATGACATTACAATAAGCCAAACTACAAGTGG
AGCTCAAGTGAAGGGGAAGCAAGTATGGAGAGCTACAATTACAAACAATTGTATTTGTTCTCAATCAAGTTTGAAATTGGATTGCAATGGATTTAACACAGTTGAGAAAG
TTGATGAATCAATCTTAATGGTTGCTGGCTCAGTTTGTTTGGTTAACAGTGGTCAGCCAGTCTTCGAATCAAGCCCAATTTCTTTCACTTATGCTTGGGATAATGCCTTT
CCTTTCAAGCCCCTCTCCTCTCAAATTTCTTGTTCTTAA
Protein sequenceShow/hide protein sequence
MVASIKFLCVLFFFCLLSKGNCECTLNDITISQTTSGAQVKGKQVWRATITNNCICSQSSLKLDCNGFNTVEKVDESILMVAGSVCLVNSGQPVFESSPISFTYAWDNAF
PFKPLSSQISCS