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Lsi04G021110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G021110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBeta-1,3-N-Acetylglucosaminyltransferase family protein, putative
Genome locationchr04:28247826..28248828
RNA-Seq ExpressionLsi04G021110
SyntenyLsi04G021110
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60075.1 hypothetical protein Csa_001952 [Cucumis sativus]5.0e-5282.93Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP
        MVAS I +  +LFFFCLLSKGNC+C++++I ISQSTTG+EVNGKQEWRATI N CVCSQYSVK DCNGFNTVEKVDESILMVAGSVCLVNNGQPIF S+P
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        ISFTYAWDNAF F PLFSQ+ACS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

XP_006450371.1 uncharacterized protein At1g05835 [Citrus clementina]1.2e-3253.66Show/hide
Query:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVC-LVNNGQPIFKSNP
        +A+I+KFL  +  F +++KGNCQCTLD+I +SQS TGK V  KQEWR T+ N C+C+Q  +KL C GF TVE +D SI+ ++G  C +VNNG P +    
Subjt:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVC-LVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        +SF YAWD +F FKP+ SQI+CS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

XP_022141896.1 uncharacterized protein At1g05835-like [Momordica charantia]9.8e-4067.48Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP
        MVAS IK LC LFFFCLLSKGNCQC+L +I+I Q  T K V G+QEW  T+ NNCVCSQY+VKLDC GF++ E VD S L   G+ CL+N G+PIFKS+P
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        ISFTYAWD  F FKPL SQ+ACS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

XP_030926576.1 TPD1 protein homolog 1-like [Quercus lobata]4.0e-3357.38Show/hide
Query:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNPI
        +A+ IKFLCVLF    + KGNCQCTL ++TI QS TG+ V  K  W  TI N C+CSQ  +KL CNGF TV+ VD S+L  +G+ CLVNNG P+  S+ +
Subjt:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNPI

Query:  SFTYAWDNAFAFKPLFSQIACS
        SFTYAWD +F+F+PL SQI CS
Subjt:  SFTYAWDNAFAFKPLFSQIACS

XP_038896903.1 TPD1 protein homolog 1-like [Benincasa hispida]5.7e-5688.62Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP
        MVAS IKFLCVLFFFCLLSKG  QC++++ITISQSTTGKEVNGKQEWRATI NNCVCSQYSVK DCNGFN+VEKVDESILMVAGS CLVNNGQP+FKSNP
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        ISFTYAWDNAF+FKPLFSQ+ACS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

TrEMBL top hitse value%identityAlignment
A0A067F358 Uncharacterized protein5.6e-3353.66Show/hide
Query:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVC-LVNNGQPIFKSNP
        +A+I+KFL  +  F +++KGNCQCTLD+I +SQS TGK V  KQEWR T+ N C+C+Q  +KL C GF TVE +D SI+ ++G  C +VNNG P +    
Subjt:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVC-LVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        +SF YAWD +F FKP+ SQI+CS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

A0A0A0LDN0 Uncharacterized protein2.4e-5282.93Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP
        MVAS I +  +LFFFCLLSKGNC+C++++I ISQSTTG+EVNGKQEWRATI N CVCSQYSVK DCNGFNTVEKVDESILMVAGSVCLVNNGQPIF S+P
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        ISFTYAWDNAF F PLFSQ+ACS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

A0A0A0LEA1 Uncharacterized protein1.3e-4575.61Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP
        MVAS IKF+CVLFFFCLLSKGNC+C L++I ISQ+TTG  V GKQ W+ATI NNC+C Q S+KLDCNGFNTV+ VD SIL V+GSVCLVN GQPIF+S P
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        ISFTYA DNAF FKPL SQI+CS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

A0A6J1CKK7 uncharacterized protein At1g05835-like4.7e-4067.48Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP
        MVAS IK LC LFFFCLLSKGNCQC+L +I+I Q  T K V G+QEW  T+ NNCVCSQY+VKLDC GF++ E VD S L   G+ CL+N G+PIFKS+P
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNP

Query:  ISFTYAWDNAFAFKPLFSQIACS
        ISFTYAWD  F FKPL SQ+ACS
Subjt:  ISFTYAWDNAFAFKPLFSQIACS

A0A7N2M2J3 Uncharacterized protein1.9e-3357.38Show/hide
Query:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNPI
        +A+ IKFLCVLF    + KGNCQCTL ++TI QS TG+ V  K  W  TI N C+CSQ  +KL CNGF TV+ VD S+L  +G+ CLVNNG P+  S+ +
Subjt:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNPI

Query:  SFTYAWDNAFAFKPLFSQIACS
        SFTYAWD +F+F+PL SQI CS
Subjt:  SFTYAWDNAFAFKPLFSQIACS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058354.0e-0428.4Show/hide
Query:  QEWRATIINNC-VCSQYSVKLDCNGF--NTVEKVDESILMVAGSVCLVNNGQPIFKSNPISFTYAWDNAFAFKPLFSQIAC
        +++R  ++N C +C   +++L C GF  + V+     +L  +   C+VN+G P+     +SF Y+  + FA +PL     C
Subjt:  QEWRATIINNC-VCSQYSVKLDCNGF--NTVEKVDESILMVAGSVCLVNNGQPIFKSNPISFTYAWDNAFAFKPLFSQIAC

Q1G3T1 TPD1 protein homolog 13.3e-0628.71Show/hide
Query:  CTLDEITISQSTTGKEVNGKQEWRATIINNCV--CSQYSVKLDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFKSNPISFTYAWDNAFAFKPLFSQIA
        C+ D+I + Q +T    +G   +   I N+CV  C+   + + C  F++V  V+  +   +    CLVN+GQP+     +SF YA  N+F++    + ++
Subjt:  CTLDEITISQSTTGKEVNGKQEWRATIINNCV--CSQYSVKLDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFKSNPISFTYAWDNAFAFKPLFSQIA

Query:  C
        C
Subjt:  C

Arabidopsis top hitse value%identityAlignment
AT1G32583.1 FUNCTIONS IN: molecular_function unknown2.3e-0728.71Show/hide
Query:  CTLDEITISQSTTGKEVNGKQEWRATIINNCV--CSQYSVKLDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFKSNPISFTYAWDNAFAFKPLFSQIA
        C+ D+I + Q +T    +G   +   I N+CV  C+   + + C  F++V  V+  +   +    CLVN+GQP+     +SF YA  N+F++    + ++
Subjt:  CTLDEITISQSTTGKEVNGKQEWRATIINNCV--CSQYSVKLDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFKSNPISFTYAWDNAFAFKPLFSQIA

Query:  C
        C
Subjt:  C

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein5.2e-1533.61Show/hide
Query:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNPI
        +A  +K   V+    ++S G C CT  +I I    TG+E+ G+ EW+ T+IN C C Q  V L C GF   + V   +L   G+ CL+  G  +      
Subjt:  VASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNPI

Query:  SFTYAWDNAFAFKPLFSQI
         FTYA    + F+P+ S++
Subjt:  SFTYAWDNAFAFKPLFSQI

AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein8.0e-1633.6Show/hide
Query:  MVASIIKFLCVLFFFCLLSK--GNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKS
        M  +  KFLC++  F  +++  G+   +L+ +++ QS TG  V  K EW   ++N+  C      L C  F +V  +D  +L  +G  CL+ NG  I   
Subjt:  MVASIIKFLCVLFFFCLLSK--GNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKS

Query:  NPISFTYAWDNAFAFKPLFSQIACS
        + ISF Y WD +F  K +   IACS
Subjt:  NPISFTYAWDNAFAFKPLFSQIACS

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein3.3e-1735.77Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNC-VCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSN
        M ++  K LC++ F   +++G   C L+ +++ QS TGK V  K EW   + N C  C     KL C GF +V  V  S+L  +G +CL+N G  IF   
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNC-VCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSN

Query:  PISFTYAWDNAFAFKPLFSQIAC
           F Y WD +F  K +   I C
Subjt:  PISFTYAWDNAFAFKPLFSQIAC

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.7e-1835.77Show/hide
Query:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNC-VCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSN
        M ++  K LC++ F   +++G   C+L+ +++ QS TGK V  K EW   + N C  C   + +L C GFN+V  +D S+L+ +G  CLVN G+ I    
Subjt:  MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNC-VCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSN

Query:  PISFTYAWDNAFAFKPLFSQIAC
         I F Y WD +F  K +   + C
Subjt:  PISFTYAWDNAFAFKPLFSQIAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCCTCCATCATCAAGTTTCTATGTGTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGCAATTGCCAATGCACATTGGATGAGATAACAATCAGTCAAAGTACAAC
TGGAAAAGAAGTGAATGGGAAGCAAGAATGGAGAGCCACAATCATAAACAATTGTGTTTGTTCACAATATAGTGTGAAATTGGACTGCAATGGATTTAACACAGTTGAGA
AGGTTGATGAATCAATCTTAATGGTTGCTGGCTCAGTGTGTTTGGTTAACAATGGTCAGCCAATCTTTAAATCAAATCCCATTTCCTTCACTTATGCTTGGGATAATGCC
TTTGCTTTTAAGCCCCTCTTCTCTCAAATTGCTTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCATATTGAATTGAAAAAGAAAATCACAAATTAAAAGTATGGTTGCCTCCATCATCAAGTTTCTATGTGTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGCAATTGCCAA
TGCACATTGGATGAGATAACAATCAGTCAAAGTACAACTGGAAAAGAAGTGAATGGGAAGCAAGAATGGAGAGCCACAATCATAAACAATTGTGTTTGTTCACAATATAG
TGTGAAATTGGACTGCAATGGATTTAACACAGTTGAGAAGGTTGATGAATCAATCTTAATGGTTGCTGGCTCAGTGTGTTTGGTTAACAATGGTCAGCCAATCTTTAAAT
CAAATCCCATTTCCTTCACTTATGCTTGGGATAATGCCTTTGCTTTTAAGCCCCTCTTCTCTCAAATTGCTTGTTCTTAACTTCTCTTTCCTTATTTATTTACCAACAAT
AATGGGCAAAGTTTGTATTGGCCTTTAATTATATGAATTTTATTTCAATTTTCTTTAGTATCAATAATAGTGAACTCTTTTTTTA
Protein sequenceShow/hide protein sequence
MVASIIKFLCVLFFFCLLSKGNCQCTLDEITISQSTTGKEVNGKQEWRATIINNCVCSQYSVKLDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFKSNPISFTYAWDNA
FAFKPLFSQIACS