CuGenDBv2

Gene ID	Lsi04G021360
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	chaperone protein DnaJ-like
Genome location	chr04:28488121..28489022
RNA-Seq Expression	Lsi04G021360
Synteny	Lsi04G021360
Gene Ontology terms	GO:0061077 - chaperone-mediated protein folding (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0101031 - chaperone complex (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038807.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa]

1.7e-48

91.51

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Query:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSFS SANCFSS TT+SAIR CSNQKLNLI+N FHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCG
        SCWLCG
Subjt:  SCWLCG

XP_004136477.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X2 [Cucumis sativus]

9.3e-47

89.72

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Query:  MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG
        MASSSFS SANCFSS TT+SA IR CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAV+CSQCKG GVNAVDFFNGQFKAG
Subjt:  MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG

Query:  ASCWLCG
         SCWLCG
Subjt:  ASCWLCG

XP_008466412.1 PREDICTED: chaperone protein DnaJ-like [Cucumis melo]

5.8e-49

91.51

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Query:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSFS SANCFSS TT+SA+R CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCG
        SCWLCG
Subjt:  SCWLCG

XP_031737825.1 uncharacterized protein LOC101218754 isoform X1 [Cucumis sativus]

9.3e-47

89.72

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Query:  MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG
        MASSSFS SANCFSS TT+SA IR CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAV+CSQCKG GVNAVDFFNGQFKAG
Subjt:  MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG

Query:  ASCWLCG
         SCWLCG
Subjt:  ASCWLCG

XP_038899028.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]

2.8e-51

94.34

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Query:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSFSASANCFSS TT+SAIRG SNQKLNL+NNGF+DYSSPARFPHLN+KAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
Subjt:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCG
        SCWLCG
Subjt:  SCWLCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDP8 Uncharacterized protein

4.5e-47

89.72

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Query:  MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG
        MASSSFS SANCFSS TT+SA IR CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAV+CSQCKG GVNAVDFFNGQFKAG
Subjt:  MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG

Query:  ASCWLCG
         SCWLCG
Subjt:  ASCWLCG

A0A1S3CSH4 chaperone protein DnaJ-like

2.8e-49

91.51

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Query:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSFS SANCFSS TT+SA+R CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCG
        SCWLCG
Subjt:  SCWLCG

A0A5A7TB44 Chaperone protein DnaJ-like

8.2e-49

91.51

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Query:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSFS SANCFSS TT+SAIR CSNQKLNLI+N FHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCG
        SCWLCG
Subjt:  SCWLCG

A0A5D3E725 Chaperone protein DnaJ-like

2.8e-49

91.51

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Query:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSFS SANCFSS TT+SA+R CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCG
        SCWLCG
Subjt:  SCWLCG

A0A6J1D4M9 uncharacterized protein LOC111016947

1.5e-39

81.13

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Query:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA
        MA S+FSASA CF+S TTV AI GCSN KLNLI+NG H YS  ARFPHLN KAAKNDRNTKPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG 
Subjt:  MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCG
        SCWLCG
Subjt:  SCWLCG

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

1.6e-17

61.9

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Query:  ARFPHLNVKAAKND-RNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLC
        +R     VKAA N+ + TKPNS++C +C+G G V CSQCKG GVN +D FNGQFKAGA CWLC
Subjt:  ARFPHLNVKAAKND-RNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLC

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

2.6e-15

52.46

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Query:  LNVKAAKNDRNTKPN----SVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLC
        +  KA +ND++ K +    S++C DC+GNGA++C++C+GNGVN+VD+F G+FKAG+ CWLC
Subjt:  LNVKAAKNDRNTKPN----SVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLC

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.1e-18

61.9

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Query:  ARFPHLNVKAAKND-RNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLC
        +R     VKAA N+ + TKPNS++C +C+G G V CSQCKG GVN +D FNGQFKAGA CWLC
Subjt:  ARFPHLNVKAAKND-RNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLC

Sequences

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CDS sequence

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ATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGCAATTAGAGGTTGTAGTAATCAAAAGCTCAACCTAATTAACAATGGCTT
CCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCGTGATTTGTGGCGATTGCGATGGAAATG
GTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCCTGTTGGCTGTGCGGGTAA

mRNA sequence

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TATTATCATCCATATATAATCGCCTTTACCAAATCAACAATTTGTTTTCTTTCCTTAAAATATAAAAATAAAATAAAATAAAATCTATCCGCGCCAACTTGAGCCTAAAT
CAACCAATTAGAGGATATATGCATTTTGTCTTTAAAATTTTAAAATATCCAAAAATGAAAAACATTAATATATATATATATATTAACAGATATTTTTCGTAGTATAATCC
ATTAACAGCCAACCGTTCGGAATTTCAATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGCAATTAGAGGTTGTAGTAATCA
AAAGCTCAACCTAATTAACAATGGCTTCCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCG
TGATTTGTGGCGATTGCGATGGAAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCC
TGTTGGCTGTGCGGGTAA

Protein sequence

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MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCG

Lsi04G021360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome