; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G021520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G021520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:28606380..28610578
RNA-Seq ExpressionLsi04G021520
SyntenyLsi04G021520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038795.1 uncharacterized protein E6C27_scaffold92G003500 [Cucumis melo var. makuwa]2.2e-5778.98Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVD-YSRRRV-KISRWSDK-RIC
        MAL INCSSSSVFLLPQ P  NSFDS KTA+L +KED GSWRSRSVCALGLASLIFAIE+G+VF+ASESLALES PQLVD YSRRR+ KI RWSD+ R C
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVD-YSRRRV-KISRWSDK-RIC

Query:  APWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDV-KNAPGIQVISSKISSNYCFSL
        APWRA S EIIVPENLPRPS RRK EA++Y F+D+ KNAPG+QVISS+ISS+YCFSL
Subjt:  APWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDV-KNAPGIQVISSKISSNYCFSL

XP_004136339.1 uncharacterized protein LOC101204764 [Cucumis sativus]2.4e-5174.23Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRS-RSVCALGLASLIFAIELGEVFVASESLALESPPQ-LVDY---SRRRVKISRWSDK-
        MALRINCSSSS+ LLPQAP SNSF S K+++LS+KEDE SWRS RSVCALGLASLIFAIE+ +VF+ASESLA+ESPPQ LVDY    RR  KISRWSDK 
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRS-RSVCALGLASLIFAIELGEVFVASESLALESPPQ-LVDY---SRRRVKISRWSDK-

Query:  RICAPWRANSFEIIVPENLPRPSHRRKWEAVSY-AFMDVKN--APGIQVISSKISS-NYCFSL
        R CAPWRANS EIIVPENLPR S RRKWE ++Y  F+DVK    PGIQV +S+ISS NYCFSL
Subjt:  RICAPWRANSFEIIVPENLPRPSHRRKWEAVSY-AFMDVKN--APGIQVISSKISS-NYCFSL

XP_022138217.1 uncharacterized protein LOC111009442 isoform X1 [Momordica charantia]4.5e-5072.9Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALES--PPQLVDYSRRRVKISRWSDKRICA
        MALR+NC S+SVFLLP+APDSNSFD++K ARLS+KE EGSWRSR  CALGLASLI AIE G  FVA E  ALES  PPQLVD   RR+KISRWSDKR CA
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALES--PPQLVDYSRRRVKISRWSDKRICA

Query:  PWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL
        PWRANS E IVPENLPRPS RRKWE V++      NAP IQVISS+ +S YCFSL
Subjt:  PWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL

XP_023524416.1 uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo]1.3e-5275.16Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRWSDKRICAPW
        M L INC SSSV LLP+APDSNSFDS+K ARLS K+D+G+WR RS CALGLASLI AIE G+V VA E+ ALESPPQ+VD   RRVKISRWSDKR CA W
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRWSDKRICAPW

Query:  RANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL
        RANS EIIVPENLPRPS RRKWEA+  AF DV+NAP +QVISSK  S YCFSL
Subjt:  RANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL

XP_038899075.1 uncharacterized protein LOC120086473 [Benincasa hispida]1.4e-7088.89Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRWSDKRICAPW
        MALRI+CSSSSVFLLPQAPDSNSFDS KTARLSVKEDEGSWRSRSVC LGLASLIFAIE+ ++FVASESLALESPPQLVDYSR+RVKISRWSDKR CAPW
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRWSDKRICAPW

Query:  RANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL
        RANS E IVPENLPRPSHRRKWEA++Y  MDVKNAPGI+VISSK SSNYCFSL
Subjt:  RANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL

TrEMBL top hitse value%identityAlignment
A0A0A0LDQ8 Uncharacterized protein1.2e-5174.23Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRS-RSVCALGLASLIFAIELGEVFVASESLALESPPQ-LVDY---SRRRVKISRWSDK-
        MALRINCSSSS+ LLPQAP SNSF S K+++LS+KEDE SWRS RSVCALGLASLIFAIE+ +VF+ASESLA+ESPPQ LVDY    RR  KISRWSDK 
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRS-RSVCALGLASLIFAIELGEVFVASESLALESPPQ-LVDY---SRRRVKISRWSDK-

Query:  RICAPWRANSFEIIVPENLPRPSHRRKWEAVSY-AFMDVKN--APGIQVISSKISS-NYCFSL
        R CAPWRANS EIIVPENLPR S RRKWE ++Y  F+DVK    PGIQV +S+ISS NYCFSL
Subjt:  RICAPWRANSFEIIVPENLPRPSHRRKWEAVSY-AFMDVKN--APGIQVISSKISS-NYCFSL

A0A5A7TBN7 Uncharacterized protein1.1e-5778.98Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVD-YSRRRV-KISRWSDK-RIC
        MAL INCSSSSVFLLPQ P  NSFDS KTA+L +KED GSWRSRSVCALGLASLIFAIE+G+VF+ASESLALES PQLVD YSRRR+ KI RWSD+ R C
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVD-YSRRRV-KISRWSDK-RIC

Query:  APWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDV-KNAPGIQVISSKISSNYCFSL
        APWRA S EIIVPENLPRPS RRK EA++Y F+D+ KNAPG+QVISS+ISS+YCFSL
Subjt:  APWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDV-KNAPGIQVISSKISSNYCFSL

A0A6J1CAG3 uncharacterized protein LOC111009442 isoform X12.2e-5072.9Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALES--PPQLVDYSRRRVKISRWSDKRICA
        MALR+NC S+SVFLLP+APDSNSFD++K ARLS+KE EGSWRSR  CALGLASLI AIE G  FVA E  ALES  PPQLVD   RR+KISRWSDKR CA
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALES--PPQLVDYSRRRVKISRWSDKRICA

Query:  PWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL
        PWRANS E IVPENLPRPS RRKWE V++      NAP IQVISS+ +S YCFSL
Subjt:  PWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL

A0A6J1CAH3 uncharacterized protein LOC111009442 isoform X21.4e-4473.05Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALES--PPQLVDYSRRRVKISRWSDKRICA
        MALR+NC S+SVFLLP+APDSNSFD++K ARLS+KE EGSWRSR  CALGLASLI AIE G  FVA E  ALES  PPQLVD   RR+KISRWSDKR CA
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALES--PPQLVDYSRRRVKISRWSDKRICA

Query:  PWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQ
        PWRANS E IVPENLPRPS RRKWE V++      NAP IQ
Subjt:  PWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQ

A0A6J1J2V8 uncharacterized protein LOC1114807835.6e-4673.38Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRWSDKRICAPW
        M L INC SSSV LLP+APDSNSFDS+K ARLS K+D G+WR RS CALGLASLI AIE G++ VA E+ ALESPPQ+VD   RRVKISRWSDKR CA W
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRWSDKRICAPW

Query:  RANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQ
        RANS EIIVPENLPRPS RRKWE +  AF DV+NAP +Q
Subjt:  RANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein3.6e-1336.2Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDS-----AKTARLSVKEDEGSWRSR-SVCA--LGLAS--LIFAIELGEVFVASESLALESPPQLVDYSRRRVKISR
        MA RI+C  +    LP   DSNS  S       T+++S +  E     R + C+  LG+A+  +I  I++ +V  + E+  ++SP +  + +   V   R
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDS-----AKTARLSVKEDEGSWRSR-SVCA--LGLAS--LIFAIELGEVFVASESLALESPPQLVDYSRRRVKISR

Query:  WSDKRICAPWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL
        WSDKR C PW  NS E IVPENLPRPS  R+ E    A  D   AP + V+ ++++   CFS+
Subjt:  WSDKRICAPWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL

AT2G25625.2 unknown protein3.6e-1335.19Show/hide
Query:  MALRINCSSSSVFLLPQAPDSNSFDS-----AKTARLSVKEDEGSWRSRSVCA--LGLAS--LIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRW
        MA RI+C  +    LP   DSNS  S       T+++S + +  +   ++ C+  LG+A+  +I  I++ +V  + E+  ++SP +  + +   V   RW
Subjt:  MALRINCSSSSVFLLPQAPDSNSFDS-----AKTARLSVKEDEGSWRSRSVCA--LGLAS--LIFAIELGEVFVASESLALESPPQLVDYSRRRVKISRW

Query:  SDKRICAPWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL
        SDKR C PW  NS E IVPENLPRPS  R+ E    A  D   AP + V+ ++++   CFS+
Subjt:  SDKRICAPWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGGAATGAATACCAGGCGGCTCCGAGGACAGAGACGCCGATGGCTATGGCAATGCCCACGGCGGAGAAGGTAATTAAAAAATATTGCTTAATCCACGTGTTCAA
TTCTTCCGTGACAGTCACTGTAACTTTAACGTCTGCCCAGGAAATGGCTTTAAGAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAAGCTCCCGATTCAAATT
CCTTCGACTCTGCAAAAACCGCTCGATTATCTGTGAAGGAAGATGAAGGATCATGGAGAAGCCGAAGCGTCTGCGCTTTAGGTTTAGCGAGCTTGATTTTCGCAATCGAA
CTCGGCGAGGTCTTCGTCGCTAGTGAATCTCTGGCTCTGGAATCGCCGCCGCAACTTGTGGATTATTCGAGGAGGCGTGTGAAGATCTCAAGATGGAGCGACAAAAGAAT
ATGCGCTCCATGGCGAGCCAATTCGTTCGAGATCATCGTACCTGAGAACCTCCCCAGGCCGTCGCATCGCCGGAAGTGGGAGGCAGTTTCATATGCATTCATGGATGTGA
AGAACGCTCCGGGAATTCAAGTAATTTCTTCTAAAATTAGCTCCAATTACTGTTTTTCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGGAATGAATACCAGGCGGCTCCGAGGACAGAGACGCCGATGGCTATGGCAATGCCCACGGCGGAGAAGGTAATTAAAAAATATTGCTTAATCCACGTGTTCAA
TTCTTCCGTGACAGTCACTGTAACTTTAACGTCTGCCCAGGAAATGGCTTTAAGAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAAGCTCCCGATTCAAATT
CCTTCGACTCTGCAAAAACCGCTCGATTATCTGTGAAGGAAGATGAAGGATCATGGAGAAGCCGAAGCGTCTGCGCTTTAGGTTTAGCGAGCTTGATTTTCGCAATCGAA
CTCGGCGAGGTCTTCGTCGCTAGTGAATCTCTGGCTCTGGAATCGCCGCCGCAACTTGTGGATTATTCGAGGAGGCGTGTGAAGATCTCAAGATGGAGCGACAAAAGAAT
ATGCGCTCCATGGCGAGCCAATTCGTTCGAGATCATCGTACCTGAGAACCTCCCCAGGCCGTCGCATCGCCGGAAGTGGGAGGCAGTTTCATATGCATTCATGGATGTGA
AGAACGCTCCGGGAATTCAAGTAATTTCTTCTAAAATTAGCTCCAATTACTGTTTTTCTCTGTAAATATCTATGACTTTTGTTTTGTAAGTCGTGTTATCAATCACTTCA
ATGGCGATCCAACGTGAATAATTTTCGATATAGGCAAAATTAAAGAAAAAAAAAATATAGTTGAATTGAAATGTAACGCAGTACAGATTGGAATTATTCAGGTTCAAGAG
GCATTTTTGTGTAGTACATGCAGTACAGGCTATGTGTATCAGAAAAGTTTGGTGATCTTTCATCTTGATGGTTTGTTCACGCCATACATTCAGTCATGGGCGGCCCAATA
ATATTTGGGCCGCTGCTCTAAATTACAAGAGCCCAATTAAATTGTCATCTTTGCTCGATAA
Protein sequenceShow/hide protein sequence
MKWNEYQAAPRTETPMAMAMPTAEKVIKKYCLIHVFNSSVTVTVTLTSAQEMALRINCSSSSVFLLPQAPDSNSFDSAKTARLSVKEDEGSWRSRSVCALGLASLIFAIE
LGEVFVASESLALESPPQLVDYSRRRVKISRWSDKRICAPWRANSFEIIVPENLPRPSHRRKWEAVSYAFMDVKNAPGIQVISSKISSNYCFSL