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Lsi04G021650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G021650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:28706038..28709723
RNA-Seq ExpressionLsi04G021650
SyntenyLsi04G021650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60270.2 hypothetical protein Csa_001570 [Cucumis sativus]1.2e-0537.4Show/hide
Query:  LEKLADSDSLLCATVSYFNLSIFPINMGTDRRDYKEKLASNTIYLIEGVALQELWSKTHYAVMFGFASKLEGQGRVDCSVRLVEVRSKLLLSLKVSFFRA
        LEKLADSDSL C + S  NL + P       RDYKEKL SNT    +   L  + +  H   +   +++ E                   +   + F R+
Subjt:  LEKLADSDSLLCATVSYFNLSIFPINMGTDRRDYKEKLASNTIYLIEGVALQELWSKTHYAVMFGFASKLEGQGRVDCSVRLVEVRSKLLLSLKVSFFRA

Query:  LR-IVRETHCTVGATISKYMAVK
             R THCTVGATIS+YMAVK
Subjt:  LR-IVRETHCTVGATISKYMAVK
TrEMBL top hitse value%identityAlignment
A0A0A0LGQ8 Uncharacterized protein6.0e-1140.71Show/hide
Query:  PAVIYWPNPDMLSARP-LEKLADSDSLLCATVSYFNLSIFPINMGTDRRDYKEKLASNTIYLIEGVALQELWSKTHYAVMFGFASKLEGQGRVDCSVRLV
        PAV+  PNPDML A P LEKLADSDSL C + S  NL + P       RDYKEKL SNT    +   L  + +  H   +   +++ E            
Subjt:  PAVIYWPNPDMLSARP-LEKLADSDSLLCATVSYFNLSIFPINMGTDRRDYKEKLASNTIYLIEGVALQELWSKTHYAVMFGFASKLEGQGRVDCSVRLV

Query:  EVRSKLLLSLKVSFFRALR-IVRETHCTVGATISKYMAVK
               +   + F R+     R THCTVGATIS+YMAVK
Subjt:  EVRSKLLLSLKVSFFRALR-IVRETHCTVGATISKYMAVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCAAAAACTCCTTCGGAGTGTCCTTGTATGTAATATTCAGTTATTTGGACTTCTCAACGAAAAACCTCACGTACCTATAGCTGGAGTTTTGGTTAAGGAAAACAG
GCCGCAAGTGATTTACAAGGCCGCAAGTGATTTACAAGGCCGCAACTCACAAACAATTCCTGCTGTTATCTACTGGCCAAACCCCGATATGCTATCGGCTCGCCCACTTG
AGAAGCTTGCAGACAGTGACAGCTTATTGTGTGCCACAGTGAGCTATTTCAACCTCAGCATCTTCCCAATCAACATGGGAACTGATCGCCGAGATTATAAAGAAAAGCTT
GCATCAAATACTATTTATCTAATAGAAGGTGTAGCTCTTCAAGAGCTTTGGAGCAAAACACACTACGCAGTTATGTTTGGCTTTGCTTCCAAGCTTGAAGGGCAAGGTCG
GGTGGATTGTTCCGTGAGATTAGTCGAGGTGCGCTCAAAGTTACTGCTGTCACTTAAAGTTTCATTCTTCCGGGCACTACGGATCGTGAGGGAAACGCATTGCACTGTGG
GGGCTACCATTTCTAAGTACATGGCAGTTAAAATGACGCTGGATGTTAATGCATCCACGTTTCACTGTGCCAACTTCTTA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCAAAAACTCCTTCGGAGTGTCCTTGTATGTAATATTCAGTTATTTGGACTTCTCAACGAAAAACCTCACGTACCTATAGCTGGAGTTTTGGTTAAGGAAAACAG
GCCGCAAGTGATTTACAAGGCCGCAAGTGATTTACAAGGCCGCAACTCACAAACAATTCCTGCTGTTATCTACTGGCCAAACCCCGATATGCTATCGGCTCGCCCACTTG
AGAAGCTTGCAGACAGTGACAGCTTATTGTGTGCCACAGTGAGCTATTTCAACCTCAGCATCTTCCCAATCAACATGGGAACTGATCGCCGAGATTATAAAGAAAAGCTT
GCATCAAATACTATTTATCTAATAGAAGGTGTAGCTCTTCAAGAGCTTTGGAGCAAAACACACTACGCAGTTATGTTTGGCTTTGCTTCCAAGCTTGAAGGGCAAGGTCG
GGTGGATTGTTCCGTGAGATTAGTCGAGGTGCGCTCAAAGTTACTGCTGTCACTTAAAGTTTCATTCTTCCGGGCACTACGGATCGTGAGGGAAACGCATTGCACTGTGG
GGGCTACCATTTCTAAGTACATGGCAGTTAAAATGACGCTGGATGTTAATGCATCCACGTTTCACTGTGCCAACTTCTTA
Protein sequenceShow/hide protein sequence
MVQKLLRSVLVCNIQLFGLLNEKPHVPIAGVLVKENRPQVIYKAASDLQGRNSQTIPAVIYWPNPDMLSARPLEKLADSDSLLCATVSYFNLSIFPINMGTDRRDYKEKL
ASNTIYLIEGVALQELWSKTHYAVMFGFASKLEGQGRVDCSVRLVEVRSKLLLSLKVSFFRALRIVRETHCTVGATISKYMAVKMTLDVNASTFHCANFL