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Lsi04G021660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G021660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1 isoform X2
Genome locationchr04:28718203..28721410
RNA-Seq ExpressionLsi04G021660
SyntenyLsi04G021660
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024485.1 putative E3 ubiquitin-protein ligase RZFP34, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-4743.75Show/hide
Query:  MATFETPRYRFRSLRNARCEASGNRTLAVAINTDPILTVPHTFRFLSFSWFFPSQIQRFSQLFRAPIFELVVLDCVLVPSATTIVENHGVYYLSTQDDVQ
        MAT ET +YR RSLRNA CEASGNR LA  INT           FL F +   S   R                         + ENH VYYLST+DDVQ
Subjt:  MATFETPRYRFRSLRNARCEASGNRTLAVAINTDPILTVPHTFRFLSFSWFFPSQIQRFSQLFRAPIFELVVLDCVLVPSATTIVENHGVYYLSTQDDVQ

Query:  NEATSCGFFYLDVLYQIIWISLNLVAGDTFLVGIESGV---FNKSSDH---------DVQLVTIQSWRLWS------PPVLRCSYYMVSYNSSFLDELNS
        NEA+  G +  D  + +    +     D   +  + G    F++ ++            Q++ I +W L+       P         VSYNSSFLDELNS
Subjt:  NEATSCGFFYLDVLYQIIWISLNLVAGDTFLVGIESGV---FNKSSDH---------DVQLVTIQSWRLWS------PPVLRCSYYMVSYNSSFLDELNS

Query:  PRGVMMIGAVQHFLDNLLLMCCGALSF---------YPDSTIVLHWRIL----FSMAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEK
        P GVMMIGAVQ  +D LLLMCCG   +         +  ST +     +     SMAEVATYS+PQQIGTE NQ MTCRGKE R   TEQFDSQALPFEK
Subjt:  PRGVMMIGAVQHFLDNLLLMCCGALSF---------YPDSTIVLHWRIL----FSMAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEK

Query:  SNDPQELLEREYMQHGTCHF
        SNDP EL+E  YMQ+G  H+
Subjt:  SNDPQELLEREYMQHGTCHF

XP_004136332.1 probable E3 ubiquitin-protein ligase RZFP34 [Cucumis sativus]7.9e-2589.23Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQ IGTEENQHMTCRGKEIRTVYTEQFDS ALPFEKSNDPQ++LEREYMQHG  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

XP_008466354.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1 isoform X1 [Cucumis melo]3.5e-2590.77Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQ IGTEENQHMTCRGKEIRTVYTEQFDS ALPFEKSNDPQE+LEREYMQHG  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

XP_008466355.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1 isoform X2 [Cucumis melo]3.5e-2590.77Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQ IGTEENQHMTCRGKEIRTVYTEQFDS ALPFEKSNDPQE+LEREYMQHG  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

XP_038898695.1 probable E3 ubiquitin-protein ligase RZFP34 [Benincasa hispida]7.1e-2690.77Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQQIGTEENQHMTCRGKE+RTVYTEQFDSQALPFEKSN+PQELLEREYM+HG  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

TrEMBL top hitse value%identityAlignment
A0A0A0LHD3 Uncharacterized protein3.8e-2589.23Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQ IGTEENQHMTCRGKEIRTVYTEQFDS ALPFEKSNDPQ++LEREYMQHG  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

A0A1S3CR85 E3 ubiquitin-protein ligase MIEL1 isoform X11.7e-2590.77Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQ IGTEENQHMTCRGKEIRTVYTEQFDS ALPFEKSNDPQE+LEREYMQHG  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

A0A1S3CSD5 E3 ubiquitin-protein ligase MIEL1 isoform X21.7e-2590.77Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQ IGTEENQHMTCRGKEIRTVYTEQFDS ALPFEKSNDPQE+LEREYMQHG  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

A0A6J1BQ41 probable E3 ubiquitin-protein ligase RZFP34 isoform X12.0e-2181.54Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQQIGTEENQHMTCRGKEIRT+YTEQ DSQ L FEKSNDP+ELLE  +MQ+G  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

A0A6J1BTA4 probable E3 ubiquitin-protein ligase RZFP34 isoform X22.0e-2181.54Show/hide
Query:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF
        MAEVATYSKPQQIGTEENQHMTCRGKEIRT+YTEQ DSQ L FEKSNDP+ELLE  +MQ+G  H+
Subjt:  MAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACATTCGAAACTCCACGGTATCGCTTTCGTTCATTGAGAAACGCGCGTTGCGAAGCCTCTGGAAACCGCACCCTCGCCGTTGCTATAAATACCGATCCGATTCT
AACTGTACCTCACACATTCAGATTCTTGTCTTTCTCTTGGTTTTTTCCCTCTCAAATTCAGCGATTTTCTCAGCTGTTCAGAGCTCCGATTTTTGAGTTAGTGGTTCTCG
ATTGTGTTCTTGTTCCCTCTGCAACTACAATTGTGGAGAATCATGGGGTCTACTACTTGAGTACACAAGATGATGTCCAAAACGAAGCAACAAGTTGTGGTTTTTTCTAT
TTGGATGTTCTTTACCAAATTATTTGGATCTCTCTTAACTTGGTCGCTGGTGATACCTTTTTAGTGGGAATTGAATCCGGAGTCTTCAACAAATCAAGTGATCATGATGT
GCAATTGGTCACTATTCAAAGCTGGAGGCTCTGGAGTCCCCCAGTGCTGCGTTGTAGTTATTATATGGTCTCCTATAACTCTTCTTTTTTGGATGAACTGAACTCTCCTC
GTGGAGTTATGATGATTGGAGCTGTACAACATTTCTTGGATAATTTGTTGCTGATGTGCTGTGGTGCTTTAAGCTTCTATCCAGATTCAACCATTGTCCTGCATTGGAGG
ATATTATTTTCCATGGCAGAGGTTGCAACTTACTCCAAGCCTCAACAAATTGGGACAGAGGAAAATCAACATATGACATGCAGAGGAAAGGAGATAAGAACTGTGTACAC
TGAGCAGTTTGATTCTCAGGCCTTGCCCTTTGAAAAATCAAATGATCCCCAAGAGTTGTTGGAGAGGGAATACATGCAACATGGAACTTGTCATTTTGCAGATGTGCACA
TTATAGGCGAAGGTGCCGTATCAGAGCTCCCTGTTGTAATGAAATCTTTGATTGCCGGCATTGCCATAATGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACATTCGAAACTCCACGGTATCGCTTTCGTTCATTGAGAAACGCGCGTTGCGAAGCCTCTGGAAACCGCACCCTCGCCGTTGCTATAAATACCGATCCGATTCT
AACTGTACCTCACACATTCAGATTCTTGTCTTTCTCTTGGTTTTTTCCCTCTCAAATTCAGCGATTTTCTCAGCTGTTCAGAGCTCCGATTTTTGAGTTAGTGGTTCTCG
ATTGTGTTCTTGTTCCCTCTGCAACTACAATTGTGGAGAATCATGGGGTCTACTACTTGAGTACACAAGATGATGTCCAAAACGAAGCAACAAGTTGTGGTTTTTTCTAT
TTGGATGTTCTTTACCAAATTATTTGGATCTCTCTTAACTTGGTCGCTGGTGATACCTTTTTAGTGGGAATTGAATCCGGAGTCTTCAACAAATCAAGTGATCATGATGT
GCAATTGGTCACTATTCAAAGCTGGAGGCTCTGGAGTCCCCCAGTGCTGCGTTGTAGTTATTATATGGTCTCCTATAACTCTTCTTTTTTGGATGAACTGAACTCTCCTC
GTGGAGTTATGATGATTGGAGCTGTACAACATTTCTTGGATAATTTGTTGCTGATGTGCTGTGGTGCTTTAAGCTTCTATCCAGATTCAACCATTGTCCTGCATTGGAGG
ATATTATTTTCCATGGCAGAGGTTGCAACTTACTCCAAGCCTCAACAAATTGGGACAGAGGAAAATCAACATATGACATGCAGAGGAAAGGAGATAAGAACTGTGTACAC
TGAGCAGTTTGATTCTCAGGCCTTGCCCTTTGAAAAATCAAATGATCCCCAAGAGTTGTTGGAGAGGGAATACATGCAACATGGAACTTGTCATTTTGCAGATGTGCACA
TTATAGGCGAAGGTGCCGTATCAGAGCTCCCTGTTGTAATGAAATCTTTGATTGCCGGCATTGCCATAATGAAATAA
Protein sequenceShow/hide protein sequence
MATFETPRYRFRSLRNARCEASGNRTLAVAINTDPILTVPHTFRFLSFSWFFPSQIQRFSQLFRAPIFELVVLDCVLVPSATTIVENHGVYYLSTQDDVQNEATSCGFFY
LDVLYQIIWISLNLVAGDTFLVGIESGVFNKSSDHDVQLVTIQSWRLWSPPVLRCSYYMVSYNSSFLDELNSPRGVMMIGAVQHFLDNLLLMCCGALSFYPDSTIVLHWR
ILFSMAEVATYSKPQQIGTEENQHMTCRGKEIRTVYTEQFDSQALPFEKSNDPQELLEREYMQHGTCHFADVHIIGEGAVSELPVVMKSLIAGIAIMK