CuGenDBv2

Gene ID	Lsi04G021690
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Polyamine-modulated factor 1-binding protein
Genome location	chr04:28746838..28761096
RNA-Seq Expression	Lsi04G021690
Synteny	Lsi04G021690
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591596.1 hypothetical protein SDJN03_13942, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-26

94.29

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

KAG7024488.1 hypothetical protein SDJN02_13304 [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-26

94.29

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

XP_022937053.1 uncharacterized protein LOC111443468 [Cucurbita moschata]

2.0e-26

94.29

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

XP_022976221.1 uncharacterized protein LOC111476676 [Cucurbita maxima]

2.0e-26

94.29

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

XP_023535872.1 uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo]

2.0e-26

94.29

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJE0 Uncharacterized protein

4.8e-26

95.59

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG
        +ISQQAQ AMENMLRMISEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGG
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG

A0A1S3CR82 uncharacterized protein LOC103503784

1.1e-25

94.37

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN-GGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN GGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN-GGGTL

A0A5A7TBQ0 Uncharacterized protein

1.1e-25

94.37

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN-GGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN GGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN-GGGTL

A0A6J1FEZ1 uncharacterized protein LOC111443468

9.6e-27

94.29

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

A0A6J1IGC1 uncharacterized protein LOC111476676

9.6e-27

94.29

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Query:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
        +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL
Subjt:  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G25570.1 unknown protein

4.0e-17

61.19

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Query:  ISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG
        +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LDML+N  G
Subjt:  ISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG

AT5G25570.2 unknown protein

4.0e-17

61.19

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Query:  ISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG
        +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LDML+N  G
Subjt:  ISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG

AT5G25570.3 unknown protein

1.4e-17

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Query:  MANISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG
        +A +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LDML+N  G
Subjt:  MANISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG

Sequences

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CDS sequence

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mRNA sequence

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ATGGCCAATATATCACAACAGGCTCAATCGGCTATGGAGAACATGCTTAGAATGATCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAG
GGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTGCG
AGTATCCATCGTTCACAATTGTTCCAAACGCCGGCAAGAGGCTGCTGGAAACCGACGTTAAGTTCTTTATTTCGCCACTTGAGTGCCGCCGGAACAGCAAAGGTATCGGC
GACCTTGTTTCGGACACTGGTGTCGACATTGACTTCAACAGGGAAAAAAAGGAAAATGTTGCGTTGGGATTGGTGCGGTATAAAGATCTGGAGAAAAGGCAAATATCTTT
TACCATCCAACGATAATTAATATACGGTTCAGCTTTGTGATCTTATCCCCATACATCTTCCATTGCTGAAACTGAATAGCCTCACCCTGGAGCACGAAAAAATGTCCAAA
AATATGATTACATGTACACAAAATATCGGGATAATTGCGAACTCCTGGAACGATTTAACCGGTATTCCCAATTGATTAAGCGAATTGACTTTTCTTCAAAGTCACCTCAA
GCAGTATCCCAAGCAAAAACAAGCTCGGTCCTGCTGGAACTACCAAAGCAATTGACGTTGAACCAAGTAAATGATGGAAGGGAAGTTGCCAGAGACTATGTAGGTAGAAG
ACTGAACGGCAAAATCTGTTCGATTGAGGTGATTACATGTATTGAGCCAACCACTGCTTACACATATCGAGCACGGGCAGGGCGTTCGCGTGCAGTGCCTAAAAGAGAAA
TGTACCGCACAACCTGAGTTATTGTTTCTAAATCAAGCATCAAAAGCACAATAATCTTCACATTGATCAACATTTACATTAACATCAGAAGGG

Protein sequence

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MANISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTLCEYPSFTIVPNAGKRLLETDVKFFISPLECRRNSKGIG
DLVSDTGVDIDFNREKKENVALGLVRYKDLEKRQISFTIQR

Lsi04G021690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome