CuGenDBv2

Gene ID	Lsi04G021740
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1218)
Genome location	chr04:28822208..28825142
RNA-Seq Expression	Lsi04G021740
Synteny	Lsi04G021740
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136329.1 uncharacterized protein LOC101222863 [Cucumis sativus]

9.9e-92

94.18

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K MSLIVAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSVAFLLASS AGY SLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K +NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

XP_008466341.1 PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo]

1.9e-90

92.59

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K MSL VAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSVAFLLASS+AGY SLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        ALFTTGLAITLLVWPTVTEQLHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

XP_022143268.1 uncharacterized protein LOC111013177 [Momordica charantia]

9.6e-87

88.36

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K+M+LIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YP DPTV LGYLSV FLLASSIAGYFSLFYPYQGKSVPRGAMF+SSSFSVFFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        A+FTTGLAITLLVWPTVTEQLHLTRNVHHN+ET CPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYF+EI +K  NSEALKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

XP_022143291.1 uncharacterized protein LOC111013196 [Momordica charantia]

1.3e-86

87.3

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K+MSLIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YPGDPTV LGYLSV FLLASSIAGYFSLFYPYQGKSVPRGA+F+SSSFS+FFN+
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        A+FTTGLAITLLVWPTVTEQLHL RNVHHN+ET CPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYF+EI +K +N EALKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

XP_038896871.1 uncharacterized protein LOC120085090 [Benincasa hispida]

1.3e-91

93.65

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MA S+K MSLIVAALGV SFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        ALFTTGLAITLL+WPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHD9 Uncharacterized protein

4.8e-92

94.18

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K MSLIVAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSVAFLLASS AGY SLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K +NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

A0A1S3CR11 uncharacterized protein LOC103503778

9.0e-91

92.59

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K MSL VAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSVAFLLASS+AGY SLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        ALFTTGLAITLLVWPTVTEQLHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

A0A5D3E6F5 Uncharacterized protein

9.0e-91

92.59

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K MSL VAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSVAFLLASS+AGY SLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        ALFTTGLAITLLVWPTVTEQLHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

A0A6J1CPU8 uncharacterized protein LOC111013196

6.1e-87

87.3

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K+MSLIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YPGDPTV LGYLSV FLLASSIAGYFSLFYPYQGKSVPRGA+F+SSSFS+FFN+
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        A+FTTGLAITLLVWPTVTEQLHL RNVHHN+ET CPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYF+EI +K +N EALKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

A0A6J1CQA7 uncharacterized protein LOC111013177

4.6e-87

88.36

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K+M+LIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YP DPTV LGYLSV FLLASSIAGYFSLFYPYQGKSVPRGAMF+SSSFSVFFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA
        A+FTTGLAITLLVWPTVTEQLHLTRNVHHN+ET CPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYF+EI +K  NSEALKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31130.1 Protein of unknown function (DUF1218)

1.2e-74

75.84

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Query:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K MSL+V+ALGV SF+ GV+AENKKPASGTPI GKG+VIC+YP DPTV LGYLS AFLLA ++AGY SLF  Y+GKSVP   +FKS+SFSVFFNI
Subjt:  MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADK
        AL T+GLA++LL+WPT+TEQLHLTRNVH N+ET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+  +
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGTGTCTATCAAGACTATGTCTCTTATTGTTGCAGCTTTAGGTGTGACATCCTTTATATTTGGAGTCGTTGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCAT
CCCAGGCAAAGGCATCGTTATCTGTCGGTATCCGGGCGACCCAACTGTGGTCCTGGGATATCTTTCGGTTGCATTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTT
TGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTGTTTTCTTCAACATTGCCCTCTTCACAACTGGACTGGCTATAACT
TTGCTTGTATGGCCGACGGTCACCGAGCAACTTCACTTGACGCGCAATGTTCATCACAACATCGAGACAGCATGCCCAACCGCTAAGACCGGTCTTCTGGGTGGTGGTGC
ATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGTGAGGACTACTTTGATGAAATAGCCGATAAAGTAGCCAATTCTGAAG
CTCTTAAGAGCAGCGCATGA

mRNA sequence

Show/hide mRNA sequence

CTGGCGCCAACTCAGACTTATTACCAATTTTATTTCTTAATAAACTCTTTTTCCTTCTGGATTTCTAAATCGGCACAATTCCTAAGTTAAAAAAAAAAAGGAAAAAAAGA
AAACAGTTAAATTCCATATTTTAGATACGCCTCCCGAAATTTGATAGATTCCAGGATATACATTGGCCTATACAGAGCACTATAAATATCGAAACCATTGACCCATCCCT
TCAGTCTTCACCTAAAATCCGGAGTGGGAGTGGGAACGGGAGAGAAATCAATTTTCATTTCCTTTCGCTCTCCTCTTTCTTCCTTCCTTCCTTCCTTCGTTAATTTCTTC
AGGTGGTGTCATTTATCTGCAGAACAATGGCCGTGTCTATCAAGACTATGTCTCTTATTGTTGCAGCTTTAGGTGTGACATCCTTTATATTTGGAGTCGTTGCTGAGAAC
AAGAAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATCGTTATCTGTCGGTATCCGGGCGACCCAACTGTGGTCCTGGGATATCTTTCGGTTGCATTTCTTCTTGC
TTCTTCAATTGCAGGATACTTCTCTTTGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTGTTTTCTTCAACATTGCCC
TCTTCACAACTGGACTGGCTATAACTTTGCTTGTATGGCCGACGGTCACCGAGCAACTTCACTTGACGCGCAATGTTCATCACAACATCGAGACAGCATGCCCAACCGCT
AAGACCGGTCTTCTGGGTGGTGGTGCATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGTGAGGACTACTTTGATGAAAT
AGCCGATAAAGTAGCCAATTCTGAAGCTCTTAAGAGCAGCGCATGAAAAAACCTCTCTGTTTAGTGAAATAATAATTCAGTTTCATTTTACTTTGGAATTTTACTTGTCA
TTAACTATTAAGTAGAGATTTATGTGTGAATATGGTATTCTTCTTTATAGTCTTACTGTTGAACATTTCTTGTGGTGTGCTAAATCCTACACCAAACTCAATTCACAGTC
AACTAATAACATATTGGTACTAAGTTTAAATATATTCTGGCCTTCTACTTTATT

Protein sequence

Show/hide protein sequence

MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAIT
LLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

Lsi04G021740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome