; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G022020 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G022020
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionserine/arginine-rich splicing factor RSZ22A-like
Genome locationchr04:29060901..29065179
RNA-Seq ExpressionLsi04G022020
SyntenyLsi04G022020
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024518.1 Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyrosperma]2.1e-7064.8Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDD RDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS--GVTVLVEDLQDAAACHLVDVALADHLHTVVERSYL
        GGGRGRS GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S  G +     L      +                 Y 
Subjt:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS--GVTVLVEDLQDAAACHLVDVALADHLHTVVERSYL

Query:  MPTGFLVWVLTENLFAILYCVIFLLCFPKWRKRPASEQELRTTDFSTCLS
                 +      IL  VIF +   KW K  +SEQELRTTDFSTCLS
Subjt:  MPTGFLVWVLTENLFAILYCVIFLLCFPKWRKRPASEQELRTTDFSTCLS

KAG7037569.1 Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyrosperma]2.5e-6382.93Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSR-GGGGG
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDDPRDARDAIHELDG  KNGWRVELSHNSR GGGGG
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSR-GGGGG

Query:  RGGGRGRSGGSDLKCYECGEPGHFARECRLR-GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
        RGGGRGRSGGSDLKCYECGEPGHFARECR R GGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  RGGGRGRSGGSDLKCYECGEPGHFARECRLR-GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

XP_004136307.1 serine/arginine-rich splicing factor RSZ22 [Cucumis sativus]1.1e-6382.04Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDDPRDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  -GGGRGRSGGSDLKCYECGEPGHFARECRLR----GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
         GGGRGRSGGSDLKCYECGEPGHFARECRLR    GGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  -GGGRGRSGGSDLKCYECGEPGHFARECRLR----GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

XP_022133130.1 serine/arginine-rich splicing factor RSZ22-like [Momordica charantia]2.1e-6584.05Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDDPRDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  -GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
         GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  -GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

XP_022936894.1 serine/arginine-rich splicing factor RSZ22A-like [Cucurbita moschata]1.8e-6483.44Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDD RDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
        GGGRGRS GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

TrEMBL top hitse value%identityAlignment
A0A0A0LEI3 Uncharacterized protein5.5e-6482.04Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDDPRDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  -GGGRGRSGGSDLKCYECGEPGHFARECRLR----GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
         GGGRGRSGGSDLKCYECGEPGHFARECRLR    GGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  -GGGRGRSGGSDLKCYECGEPGHFARECRLR----GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

A0A6J1BUF4 serine/arginine-rich splicing factor RSZ22-like1.0e-6584.05Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDDPRDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  -GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
         GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  -GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

A0A6J1FF03 serine/arginine-rich splicing factor RSZ22A-like8.5e-6583.44Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDD RDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
        GGGRGRS GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

A0A6J1FS77 serine/arginine-rich splicing factor RSZ22-like1.2e-6382.93Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSR-GGGGG
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDDPRDARDAIHELDG  KNGWRVELSHNSR GGGGG
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSR-GGGGG

Query:  RGGGRGRSGGSDLKCYECGEPGHFARECRLR-GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
        RGGGRGRSGGSDLKCYECGEPGHFARECR R GGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  RGGGRGRSGGSDLKCYECGEPGHFARECRLR-GGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

A0A6J1IEF6 serine/arginine-rich splicing factor RSZ22A-like8.5e-6583.44Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRVSERELEDEFRVFGVIR                    VWVARRPPGYAFIDFDD RDARDAIHELDG  KNGWRVELSHNSRGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS
        GGGRGRS GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGR  +S
Subjt:  GGGRGRS-GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFS

SwissProt top hitse value%identityAlignment
O81126 Serine/arginine-rich splicing factor RSZ221.3e-4965.14Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHN--SRGGG-
        MSRVYVGNLDPRV+ERELEDEFR FGV+R                    VWVARRPPGYAF+DF+DPRDARDAI  LDG  KNGWRVE SHN   RGGG 
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHN--SRGGG-

Query:  -----GGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYGRSFFS
             GG GGGRG  GGSDLKCYECGE GHFARECR R       GG GRRRS+S     PRYRRSPSYGR  +S
Subjt:  -----GGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYGRSFFS

Q69KL9 Serine/arginine-rich splicing factor RSZ21A3.2e-4562.65Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        M+RVYVGNLDPRV+ RELEDEFRVFGV+R                    VWVAR+PPG+AFIDFDD RDA+DAI ++DG  KNGWRVELS N+  G    
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG----AGRRRSRSPRYRRSPSYGRSFFS
         GGR R G S+ KCYECGE GHFARECRLR G GG G G      R RSRSPRYRRSPSYGR  +S
Subjt:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG----AGRRRSRSPRYRRSPSYGRSFFS

Q6K4N0 Serine/arginine-rich splicing factor RSZ218.0e-4460.24Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        M+R+YVGNLDPRV+  ELEDEFRVFGV+R                    VWVAR+PPG+AFIDFDD RDA DA+ +LDG  KNGWRVELS NS       
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG----AGRRRSRSPRYRRSPSYGRSFFS
         GGR R GGS++KCYECGE GHFARECRLR G GG G G      R RSRSP+YR+SP+YGR  +S
Subjt:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG----AGRRRSRSPRYRRSPSYGRSFFS

Q6K9C3 Serine/arginine-rich splicing factor RSZ234.5e-4762.79Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        M+RVYVGNLDPRV+ RE+EDEFRVFGV+R                    VWVAR+PPG+AFIDFDD RDA DAI +LDG  KNGWRVELS  +     G 
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG-------------AGRRRSRSPRYRRSPSYGRS
        G GR RSGGSD+KCYECGEPGHFARECRLR G GG G G              GR RSRSPRYRRSPSYGRS
Subjt:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG-------------AGRRRSRSPRYRRSPSYGRS

Q9SJA6 Serine/arginine-rich splicing factor RSZ22A3.7e-4967.26Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRV+ERELEDEFR FGVIR                    VWVARRPPGYAF+DF+D RDARDAI E+DG  KNGWRVE SHN RGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRS------GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYG
        GGGRG        GGSDLKCYECGE GHFARECR RGG G      GRRRSRS     PRYR+SP+YG
Subjt:  GGGRGRS------GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYG

Arabidopsis top hitse value%identityAlignment
AT1G23860.1 RS-containing zinc finger protein 211.3e-4161.78Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        M+RVYVGNLDPRV+ERELEDEF+ FGV+R                    VWVARRPPGYAF++FDD RDA DAI  LD   KNGWRVELSH  +GG GG 
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYG
        GG RG  G  D KCYECGE GHFARECR        G G+ RRRS SPR RRSP YG
Subjt:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYG

AT1G23860.2 RS-containing zinc finger protein 211.3e-4161.78Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        M+RVYVGNLDPRV+ERELEDEF+ FGV+R                    VWVARRPPGYAF++FDD RDA DAI  LD   KNGWRVELSH  +GG GG 
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYG
        GG RG  G  D KCYECGE GHFARECR        G G+ RRRS SPR RRSP YG
Subjt:  GGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYG

AT2G24590.1 RNA recognition motif and CCHC-type zinc finger domains containing protein2.6e-5067.26Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR
        MSRVYVGNLDPRV+ERELEDEFR FGVIR                    VWVARRPPGYAF+DF+D RDARDAI E+DG  KNGWRVE SHN RGGGGGR
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGR

Query:  GGGRGRS------GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYG
        GGGRG        GGSDLKCYECGE GHFARECR RGG G      GRRRSRS     PRYR+SP+YG
Subjt:  GGGRGRS------GGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYG

AT4G31580.1 serine/arginine-rich 229.0e-5165.14Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHN--SRGGG-
        MSRVYVGNLDPRV+ERELEDEFR FGV+R                    VWVARRPPGYAF+DF+DPRDARDAI  LDG  KNGWRVE SHN   RGGG 
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHN--SRGGG-

Query:  -----GGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYGRSFFS
             GG GGGRG  GGSDLKCYECGE GHFARECR R       GG GRRRS+S     PRYRRSPSYGR  +S
Subjt:  -----GGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYGRSFFS

AT4G31580.2 serine/arginine-rich 229.0e-5165.14Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHN--SRGGG-
        MSRVYVGNLDPRV+ERELEDEFR FGV+R                    VWVARRPPGYAF+DF+DPRDARDAI  LDG  KNGWRVE SHN   RGGG 
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHN--SRGGG-

Query:  -----GGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYGRSFFS
             GG GGGRG  GGSDLKCYECGE GHFARECR R       GG GRRRS+S     PRYRRSPSYGR  +S
Subjt:  -----GGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRS-----PRYRRSPSYGRSFFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGTGTATATGTTGGGAATTTGGATCCGAGGGTTTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTGTTTGGAGTTATTCGAAGGTGTGGTATAATTAACCTTGT
GGTCAACCTTTATGATCATAACCTCATAGGAATGTGTGTATGGGTTGCACGAAGACCCCCAGGTTATGCCTTTATAGATTTTGATGACCCCAGAGATGCACGGGATGCGA
TCCATGAATTAGATGGTATGTGGAAGAATGGCTGGAGAGTTGAACTTTCCCACAATTCTAGAGGCGGTGGAGGTGGCCGTGGAGGGGGTCGTGGTCGTTCTGGTGGTTCT
GATTTGAAATGCTATGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAATGCCGTTTACGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGCTGGAAGAAGACGTAGCCGCAG
TCCTCGATACCGGCGGAGTCCAAGTTATGGTCGCAGTTTCTTTTCAGGAGTTACAGTCCTCGTGGAAGATCTCCAAGACGCCGCAGCTTGTCACCTCGTGGACGTAGCTT
TAGCAGATCACCTCCATACCGTGGTAGAGAGGAGCTACCTTATGCCAACGGGATTTTTGGTGTGGGTTTTAACTGAGAATTTGTTTGCTATACTGTATTGTGTTATTTTT
CTTCTTTGTTTCCCTAAATGGCGTAAAAGACCGGCGTCGGAGCAGGAGCTGAGGACCACCGACTTCTCAACCTGCCTTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGTGTATATGTTGGGAATTTGGATCCGAGGGTTTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTGTTTGGAGTTATTCGAAGGTGTGGTATAATTAACCTTGT
GGTCAACCTTTATGATCATAACCTCATAGGAATGTGTGTATGGGTTGCACGAAGACCCCCAGGTTATGCCTTTATAGATTTTGATGACCCCAGAGATGCACGGGATGCGA
TCCATGAATTAGATGGTATGTGGAAGAATGGCTGGAGAGTTGAACTTTCCCACAATTCTAGAGGCGGTGGAGGTGGCCGTGGAGGGGGTCGTGGTCGTTCTGGTGGTTCT
GATTTGAAATGCTATGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAATGCCGTTTACGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGCTGGAAGAAGACGTAGCCGCAG
TCCTCGATACCGGCGGAGTCCAAGTTATGGTCGCAGTTTCTTTTCAGGAGTTACAGTCCTCGTGGAAGATCTCCAAGACGCCGCAGCTTGTCACCTCGTGGACGTAGCTT
TAGCAGATCACCTCCATACCGTGGTAGAGAGGAGCTACCTTATGCCAACGGGATTTTTGGTGTGGGTTTTAACTGAGAATTTGTTTGCTATACTGTATTGTGTTATTTTT
CTTCTTTGTTTCCCTAAATGGCGTAAAAGACCGGCGTCGGAGCAGGAGCTGAGGACCACCGACTTCTCAACCTGCCTTAGTTAACACAGGATGTTTAGAGGATTACTTCG
GTTCTATATGTTTTTAGTGCTTGGACTTCGTAACGGACCTTTTTAAAATCGGGCGACGCCCTCAGCCTCTACTTTTGAGTTTGGATAAGTCCTTTCTATCTTCTGTTTGA
ATTGTTTTTCTTTTCGTCAATCAGTATAGTTGTAGGAATCTATATACTAAAATATCATTAGTTCATATTTATTTTGATAATGTTATTAAGCAAATGTCTTGAAGGGCACT
GCTAAAGATGTATGTTTTTTTTTTTTCCTTGTTGAGGTGTCGTCTCGTTCTGCTTCACTGCTTTTCTGCTTCTAGTCGTCTGCTTCTGCTTCACTGCTTTTCTGCTTCTG
CCCTATCCTGGGATTTCGTTCCACACTGCCCAGCTCTGGGATCTTCAATTTGAAACGTTGTAGGTCCCAGCCGGCTATTGATTGAATCTCTGCAGTTGTGTTGCACGCTC
TCATAATGTTTATGGGATTCCTTTTTAATTAACTTGAGGCATGAGGAACGACATCAAATGCTTCTGGCAGTGAATTGTCTCAAGATGAGCAACCTCTTCCCAACTGAATG
CTAGTGGGAGTTCTCTTCTGTGCCATTCGACTACCCATTCCCATGATTCTTTAGATTATCGCGTTCGTGTTCAGGTTCTGCACCTCTAGCAGAGACTATTTGGTTCGTCT
CTCAACTGCTTGAAAGTTCCTATTTCTCAAAGAGAAACATAAATACCTGTGGGTTGTCATCAGAAGTCGTCGTGCCCGCCAATTTGTCTTCATCTTAGTATGCGGCTGCT
AGGTCCTTCTGCCTACATAATTGTCTGCACGGTCTATGTAATTAAGATTTGTAATTTGCCTTTGTTTTTTCTTTTCCGACTGTGTTTTATATTTTATGCCAGGCTGGATC
ATTTGAATTTACAGCTTTGTTAGAAATATTTGAATTAGCCATAGCTGGAAATGCTAACCTCGCCTTTGCCTGCCAATTGAGGATTCCTTTTAAAAACCGTATTTTTTTTA
TATATTTTTTTTTTAATTTGGACTTATGGATTTAAAGGGTTTGGTGGAAAATACTTGTGAATATTGATTTTGATATAATGCGACATGTTGATACTGAAATTTATTATTAT
TATTATTATTTA
Protein sequenceShow/hide protein sequence
MSRVYVGNLDPRVSERELEDEFRVFGVIRRCGIINLVVNLYDHNLIGMCVWVARRPPGYAFIDFDDPRDARDAIHELDGMWKNGWRVELSHNSRGGGGGRGGGRGRSGGS
DLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRSFFSGVTVLVEDLQDAAACHLVDVALADHLHTVVERSYLMPTGFLVWVLTENLFAILYCVIF
LLCFPKWRKRPASEQELRTTDFSTCLS