; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G022210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G022210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr04:29259847..29262206
RNA-Seq ExpressionLsi04G022210
SyntenyLsi04G022210
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024539.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-12974.63Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+         LQ+ HY    RR       F S+DPS SI NPL+LRL+QEP+SSVKSVLDS +NAFL SSR S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKMSK NERDPDFYIDLIRLCGELQN PLAMRVFTAMEFQGVKPTVTAFNSLIE CISSHNMITAFS+FE+MKNSES KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
         DTF+YFISAFAK HD+NSM++WYSAK+AFEFS DLRTYEALIHGSVKSKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDK
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKS
        GWEINWNVVEKFIPIWFESGE EGMEEIL KL+++
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKS

XP_004136433.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial [Cucumis sativus]1.7e-13477.38Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VLALAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLNALV SLISSS  K
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LE MSK NERD DFYI+LI LCG+L+NS LAMRVF  MEFQGVKPTVTAFNSLIEACISS+NMITAFSIFEVMKNS+++KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
        TDTFYYFISAFAKLHD+NSMQ+WYSAKKAFEFSPDLRTYEALIHGSVKS CFDF VKCFEEM++SDIVPNTIILENMLEG  +RKN DEVKKFLNVVLD 
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSN
        GWEI+WNVVEKFIP+WFESGELEGM+EIL KL+K N
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSN

XP_008466249.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09060-like [Cucumis melo]1.6e-13777.35Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VL LAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLN LV SLISSS PK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKMSK NE DPD YI+LIRLCG+L++S LAMRVFT MEFQGVKPTVTAFNSLIEACISSHNMITAF IFEVMKNS+++KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
        TDTFYYFIS F+KL D+NSMQ+WYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+SDIVPN IILENMLEG  +RKN DEVKKFLNVVLD 
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD
        GWEINWNVVEKFIP+WFESGELEGM+EIL K++KSNSA D
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD

XP_022975914.1 pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima]6.9e-12873.73Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+         LQ+AHY    RR       F S+DPS SI NPL+LRL+QEP+SSVKSVLDS +N FL SSR S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKM+K NERDPDFYIDLIRLCGELQN PLAMRVFTAMEFQGVKPTVTAFNSLIE CISSHNMITAFS+FE+MKNSES+KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
         DTF+YFISAFAKL D+NSM++WYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDK
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKS
        GWEI WNVVEKFIPIWFESGE EGMEEIL KL+++
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKS

XP_038897030.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benincasa hispida]9.9e-14380.65Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MALTGK+VLALA S       +LQQAH+ L FRR       F S+DPS  ISNPLLLRLLQEPTSSVKSVLDSQ+NAFLCSSR S N LV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKMSK NERDPDFYIDL+RLCGELQNSPLAM VFT MEFQGVKPTVTAFNSLIEACISS NMITAFSIFEVMKNSESYKPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
        +DTFY+FI  FAKLHD+NSMQ+WYSAKKAF FSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+S IVPNTIILENMLEG  +RKNLDEVKKFLNVVLDK
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALDG
        GWEINWNVV KF PIWFESGELEGMEEIL K++KSNSA++G
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALDG

TrEMBL top hitse value%identityAlignment
A0A0A0LJI4 Uncharacterized protein8.2e-13577.38Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VLALAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLNALV SLISSS  K
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LE MSK NERD DFYI+LI LCG+L+NS LAMRVF  MEFQGVKPTVTAFNSLIEACISS+NMITAFSIFEVMKNS+++KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
        TDTFYYFISAFAKLHD+NSMQ+WYSAKKAFEFSPDLRTYEALIHGSVKS CFDF VKCFEEM++SDIVPNTIILENMLEG  +RKN DEVKKFLNVVLD 
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSN
        GWEI+WNVVEKFIP+WFESGELEGM+EIL KL+K N
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSN

A0A1S3CS56 pentatricopeptide repeat-containing protein At3g09060-like7.9e-13877.35Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VL LAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLN LV SLISSS PK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKMSK NE DPD YI+LIRLCG+L++S LAMRVFT MEFQGVKPTVTAFNSLIEACISSHNMITAF IFEVMKNS+++KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
        TDTFYYFIS F+KL D+NSMQ+WYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+SDIVPN IILENMLEG  +RKN DEVKKFLNVVLD 
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD
        GWEINWNVVEKFIP+WFESGELEGM+EIL K++KSNSA D
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD

A0A5D3E5Z9 Pentatricopeptide repeat-containing protein7.9e-13877.35Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VL LAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLN LV SLISSS PK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKMSK NE DPD YI+LIRLCG+L++S LAMRVFT MEFQGVKPTVTAFNSLIEACISSHNMITAF IFEVMKNS+++KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
        TDTFYYFIS F+KL D+NSMQ+WYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+SDIVPN IILENMLEG  +RKN DEVKKFLNVVLD 
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD
        GWEINWNVVEKFIP+WFESGELEGM+EIL K++KSNSA D
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD

A0A6J1FC94 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X11.6e-12272.64Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+         LQ+ HY    RR       F S+DPS SI NPL+LRL+QEP+SSVKSVLDS +NAFL SS  S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKMSK NERDPDFYIDLIRLCGELQN PLAMRVFTAMEFQGV+PTVTAFNSLIE CISSHNMITAFS+FE+MKNSES KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
         DTF+YFISAFAK HD+NSM++WYSA +AFEFS DLRTYEALIHGSVKSKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDK
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEIL
        GWEINWNVVEKFIPIWFESG  +G    L
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEIL

A0A6J1II25 pentatricopeptide repeat-containing protein At2g37230-like isoform X13.3e-12873.73Show/hide
Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+         LQ+AHY    RR       F S+DPS SI NPL+LRL+QEP+SSVKSVLDS +N FL SSR S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN
        KAQL  +       W   LEKM+K NERDPDFYIDLIRLCGELQN PLAMRVFTAMEFQGVKPTVTAFNSLIE CISSHNMITAFS+FE+MKNSES+KPN
Subjt:  KAQLGKKSYGFCEFWNGNLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPN

Query:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK
         DTF+YFISAFAKL D+NSM++WYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDK
Subjt:  TDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDK

Query:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKS
        GWEI WNVVEKFIPIWFESGE EGMEEIL KL+++
Subjt:  GWEINWNVVEKFIPIWFESGELEGMEEILAKLDKS

SwissProt top hitse value%identityAlignment
Q9CAN0 Pentatricopeptide repeat-containing protein At1g63130, mitochondrial3.2e-1125.54Show/hide
Query:  AMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVK
        A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +   +  Y         PD+ TY +LI+G   
Subjt:  AMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVK

Query:  SKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL
            D A   FE M+  D  PN +    +++GF + K +DE  +    +  +G   N       I  +F++ E +  + +  ++
Subjt:  SKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic6.9e-1426.51Show/hide
Query:  LEKMSKVN-ERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDI
        L+KM K   E D   Y  +I      +N   A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +
Subjt:  LEKMSKVN-ERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDI

Query:  NSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWF
           +  Y         PD+ TY +LI+G       D A   FE M+  D  PN +    +++GF + K ++E  +    +  +G   N       I   F
Subjt:  NSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWF

Query:  ESGELEGMEEILAKL
        ++G+ +  ++I  K+
Subjt:  ESGELEGMEEILAKL

Q9M302 Pentatricopeptide repeat-containing protein At3g488106.4e-1220.97Show/hide
Query:  DPSISISNPLLLRLLQ-EPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPKKAQLGKKSY------------GFCE--FWNGNLEKMSKVNER--
        +P++   N LL  L +       K +L    N   C    S   +++S+      K+ +   + +            G C+   + G  E M ++ E+  
Subjt:  DPSISISNPLLLRLLQ-EPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPKKAQLGKKSY------------GFCE--FWNGNLEKMSKVNER--

Query:  DPDF--YIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSA
         P+   Y  LI +        LA    T M  +G  P +   +SL++ C        A  ++  M      +PN   +   +  F    +I    S +S 
Subjt:  DPDF--YIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSA

Query:  KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGME
         +    SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  NM+E   R     E +  + ++  +    +      FI    ++G L+  E
Subjt:  KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGME

Query:  EILAKLDKSN
        ++  ++++ +
Subjt:  EILAKLDKSN

Q9SV46 Pentatricopeptide repeat-containing protein At3g54980, mitochondrial2.1e-1027.39Show/hide
Query:  NSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIH
        N   A  +F+ +  +G+ P+   +NSLI    +  NM+ A  +++ M   +  + +  T+   I    K  ++      Y+  +A    PD   Y  +++
Subjt:  NSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIH

Query:  GSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKG
        G  K   F   VK FEEM  +++ PN +I   ++ G +R  NLDE  +  + +LDKG
Subjt:  GSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKG

Q9ZUA2 Pentatricopeptide repeat-containing protein At2g017401.9e-1125.4Show/hide
Query:  VFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKC
        V+  +  +   P V  +++ I+    S  +  A   F  MK  ++  PN  TF   I  + K  D+    S Y   +    S ++ TY ALI G  K   
Subjt:  VFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKC

Query:  FDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD
           A + +  M+   + PN+++   +++GFF+R + D   KFL  +L++G  ++       I     +G+L+   EI+  ++KS+   D
Subjt:  FDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD

Arabidopsis top hitse value%identityAlignment
AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.9e-1526.51Show/hide
Query:  LEKMSKVN-ERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDI
        L+KM K   E D   Y  +I      +N   A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +
Subjt:  LEKMSKVN-ERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDI

Query:  NSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWF
           +  Y         PD+ TY +LI+G       D A   FE M+  D  PN +    +++GF + K ++E  +    +  +G   N       I   F
Subjt:  NSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWF

Query:  ESGELEGMEEILAKL
        ++G+ +  ++I  K+
Subjt:  ESGELEGMEEILAKL

AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-1225.54Show/hide
Query:  AMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVK
        A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +   +  Y         PD+ TY +LI+G   
Subjt:  AMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVK

Query:  SKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL
            D A   FE M+  D  PN +    +++GF + K +DE  +    +  +G   N       I  +F++ E +  + +  ++
Subjt:  SKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL

AT2G01740.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-1225.4Show/hide
Query:  VFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKC
        V+  +  +   P V  +++ I+    S  +  A   F  MK  ++  PN  TF   I  + K  D+    S Y   +    S ++ TY ALI G  K   
Subjt:  VFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIHGSVKSKC

Query:  FDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD
           A + +  M+   + PN+++   +++GFF+R + D   KFL  +L++G  ++       I     +G+L+   EI+  ++KS+   D
Subjt:  FDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNSALD

AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein4.6e-1320.97Show/hide
Query:  DPSISISNPLLLRLLQ-EPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPKKAQLGKKSY------------GFCE--FWNGNLEKMSKVNER--
        +P++   N LL  L +       K +L    N   C    S   +++S+      K+ +   + +            G C+   + G  E M ++ E+  
Subjt:  DPSISISNPLLLRLLQ-EPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPKKAQLGKKSY------------GFCE--FWNGNLEKMSKVNER--

Query:  DPDF--YIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSA
         P+   Y  LI +        LA    T M  +G  P +   +SL++ C        A  ++  M      +PN   +   +  F    +I    S +S 
Subjt:  DPDF--YIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSA

Query:  KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGME
         +    SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  NM+E   R     E +  + ++  +    +      FI    ++G L+  E
Subjt:  KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGME

Query:  EILAKLDKSN
        ++  ++++ +
Subjt:  EILAKLDKSN

AT3G54980.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-1127.39Show/hide
Query:  NSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIH
        N   A  +F+ +  +G+ P+   +NSLI    +  NM+ A  +++ M   +  + +  T+   I    K  ++      Y+  +A    PD   Y  +++
Subjt:  NSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAKKAFEFSPDLRTYEALIH

Query:  GSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKG
        G  K   F   VK FEEM  +++ PN +I   ++ G +R  NLDE  +  + +LDKG
Subjt:  GSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTAACTGGAAAAAAGGTTTTGGCATTGGCCAGAAGCGAGTTACAGCAAGCTCATTATGGACTTAGTTTCCGGAGATTCTTTTCATTCTTTCCTTCCTTCTTTTC
CTCTGATCCCTCGATTTCTATTTCGAATCCTCTGCTTCTCAGGTTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGAAAAATGCTTTTCTCTGTA
GTTCCCGTTTTTCCTTGAATGCCCTCGTTGCGTCTCTTATATCTTCTTCGTCGCCTAAGAAGGCTCAGCTGGGAAAGAAAAGCTATGGATTCTGTGAGTTTTGGAATGGA
AATTTGGAGAAAATGAGCAAAGTAAATGAGAGGGATCCTGATTTTTACATCGACCTGATACGTCTATGCGGAGAGCTTCAAAATTCCCCTCTTGCAATGCGTGTCTTCAC
TGCTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTCATAGAGGCTTGTATATCTTCCCATAATATGATAACTGCCTTTAGCATATTTGAAGTAA
TGAAGAACTCTGAAAGTTATAAACCCAATACTGACACTTTTTATTATTTCATTTCCGCGTTCGCCAAATTGCATGATATCAATTCTATGCAATCATGGTATTCAGCCAAA
AAGGCGTTTGAATTCTCTCCTGACCTTCGAACTTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAATGCTTTGACTTTGCTGTTAAATGTTTTGAGGAAATGATGAT
ATCTGACATTGTGCCCAACACAATCATATTGGAGAATATGCTTGAAGGGTTCTTTAGGAGGAAAAATTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGCTTGACAAAG
GATGGGAGATCAATTGGAATGTGGTAGAGAAATTCATTCCAATATGGTTTGAATCTGGGGAGTTGGAAGGGATGGAGGAGATCCTTGCCAAGCTAGATAAATCGAATTCG
GCTCTCGATGGCAGATCGACATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAACAAAGCCACGGCCCAAGACGGATACTCTGGCGAGTGTCACGTATAAGCTTGAACGGTCATTGCGCCGCATCTCGAACTCCGAGTAAACTATGGCGTTAACT
GGAAAAAAGGTTTTGGCATTGGCCAGAAGCGAGTTACAGCAAGCTCATTATGGACTTAGTTTCCGGAGATTCTTTTCATTCTTTCCTTCCTTCTTTTCCTCTGATCCCTC
GATTTCTATTTCGAATCCTCTGCTTCTCAGGTTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGAAAAATGCTTTTCTCTGTAGTTCCCGTTTTT
CCTTGAATGCCCTCGTTGCGTCTCTTATATCTTCTTCGTCGCCTAAGAAGGCTCAGCTGGGAAAGAAAAGCTATGGATTCTGTGAGTTTTGGAATGGAAATTTGGAGAAA
ATGAGCAAAGTAAATGAGAGGGATCCTGATTTTTACATCGACCTGATACGTCTATGCGGAGAGCTTCAAAATTCCCCTCTTGCAATGCGTGTCTTCACTGCTATGGAATT
TCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTCATAGAGGCTTGTATATCTTCCCATAATATGATAACTGCCTTTAGCATATTTGAAGTAATGAAGAACTCTG
AAAGTTATAAACCCAATACTGACACTTTTTATTATTTCATTTCCGCGTTCGCCAAATTGCATGATATCAATTCTATGCAATCATGGTATTCAGCCAAAAAGGCGTTTGAA
TTCTCTCCTGACCTTCGAACTTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAATGCTTTGACTTTGCTGTTAAATGTTTTGAGGAAATGATGATATCTGACATTGT
GCCCAACACAATCATATTGGAGAATATGCTTGAAGGGTTCTTTAGGAGGAAAAATTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGCTTGACAAAGGATGGGAGATCA
ATTGGAATGTGGTAGAGAAATTCATTCCAATATGGTTTGAATCTGGGGAGTTGGAAGGGATGGAGGAGATCCTTGCCAAGCTAGATAAATCGAATTCGGCTCTCGATGGC
AGATCGACATAAACATACTGTTGAATGATAACACTGTATGTGCCATGTCCAAAAGACTGGATGAAGTACAATATGTTGTTGAAAGAGCCCTTTAAAAATGGTTTAGCATT
TGAATGGGCAGATAAGGTCATCAAGGTAACTTATGCCTTATGGGTGAAGCTTATAATAGACCAAACTCATTTGTTGACTGTACAGAAGGCAATTATTTGCACACAAAATC
AACGTTTAGTGTTAAAGAATCTGATATTAGCTGGGGTTTCATATGTATCCTGTTTGGCTGTGCAAGCAAGTCGTGCTTCTTTTGATATGCTTTTCGGATTTCGTGATTTA
TCAGGTATATGATTGGAATGTTGTTAGGGATATGTTAGTAATTAGTTAAGGAAGTTGTAAAGAGATTTTGTTATAAATATAGAGTAGAGATGGAAAAGGAAAGACATTAT
TTTGATAAGTGAATTAAGACTTGAAGGTAAATCTCAAGAAATGATGTACAAGTATCTCGAAATACCTGTTACTTGACACCCAAATATTGTAGGGTCAGGCGTATTTTGAC
CATAAATCAAACAATTAGAAAAATGGCTTTTTAT
Protein sequenceShow/hide protein sequence
MALTGKKVLALARSELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPKKAQLGKKSYGFCEFWNG
NLEKMSKVNERDPDFYIDLIRLCGELQNSPLAMRVFTAMEFQGVKPTVTAFNSLIEACISSHNMITAFSIFEVMKNSESYKPNTDTFYYFISAFAKLHDINSMQSWYSAK
KAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNS
ALDGRST