; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G022510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G022510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSKI/DACH domain-containing protein 1
Genome locationchr04:29546706..29547170
RNA-Seq ExpressionLsi04G022510
SyntenyLsi04G022510
Gene Ontology termsNA
InterPro domainsIPR008004 - Protein OCTOPUS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024556.1 hypothetical protein SDJN02_13373, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4674.84Show/hide
Query:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF
        MANFH+SKSDYD RR   CKRHP H QSPGVCSLCL EKLS+++S  SSRK SDSLSSS +SSYYSSASS SSCSSP   Y YNTDRRK AF FSASSIF
Subjt:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF

Query:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        KKS+SMA   PRL+  T+S+SGK N LGFWS+ L RPRRK MEF+EVLMHSRTVV
Subjt:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV

XP_011652564.1 uncharacterized protein LOC105435032 [Cucumis sativus]2.1e-3969.01Show/hide
Query:  MANFHKSKSDYDHR-----RNHCCKRHPNHRQSPGVCSLCLTEKLSRVLS-AASSR-KTSDSLSSSNTSSYYSSAS--SSSSCSSPYLYD-YNTD----R
        MANFH SKSD DHR     R+H C+RHPNH QSPGVCSLCLTEKLSR+++ AASSR K S+SLSSS++SSYYSS S  SSSS SSP LY  YN+D    R
Subjt:  MANFHKSKSDYDHR-----RNHCCKRHPNHRQSPGVCSLCLTEKLSRVLS-AASSR-KTSDSLSSSNTSSYYSSAS--SSSSCSSPYLYD-YNTD----R

Query:  RKTAFAFSASSIFKKSKSMASIVPRLKGRTDSESGKKNK---LGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        RKTAF FSASSIFKKSK+MA +  R    T+S+ GKK+    LGFWSRFLNR R KRMEFQEVLM SRTVV
Subjt:  RKTAFAFSASSIFKKSKSMASIVPRLKGRTDSESGKKNK---LGFWSRFLNRPRRKRMEFQEVLMHSRTVV

XP_022936383.1 uncharacterized protein LOC111443018 [Cucurbita moschata]3.0e-4674.19Show/hide
Query:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF
        MANFH+SKSDYD RR   CKRHP H QSPGVCSLCL EKLS+++S  SSRK SDSLSSS ++SYYSSASS SSCSSP   Y YNTDRRK AF FSASSIF
Subjt:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF

Query:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        KKS+SMA   PRL+  T+S+SGK N LGFWS+ L RPRRK MEF+EVLMHSRTVV
Subjt:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV

XP_022975755.1 uncharacterized protein LOC111476165 [Cucurbita maxima]1.4e-4877.42Show/hide
Query:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF
        MANFHKSKSDYD RR   CKRHP H QSPGVCSLCL EKLS+++SA SSRK SDSLSSS +SSYYSSASS SSCSSP   Y YNTDRRK AF FSASSIF
Subjt:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF

Query:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        KKS+SMA   PRLK  T+S+SGK + LGFWSRFL RPRRK MEF+EVLMHSRTVV
Subjt:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV

XP_038899400.1 uncharacterized protein LOC120086706 [Benincasa hispida]4.6e-6386.25Show/hide
Query:  MANFHKSKSDYDH--RRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAA----SSRKTSDSLSSSNTSSYYSSASSSSSCSSPYLYDYNTDRRKTAFAFS
        MANFHKSKSDYDH  RRNHCCKRHP H QSPGVCSLCLTEKLSR+LSAA    SSRKTSDSLSSS +SSYYSSASSSSSCSSP LY YNTDRRKTAF FS
Subjt:  MANFHKSKSDYDH--RRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAA----SSRKTSDSLSSSNTSSYYSSASSSSSCSSPYLYDYNTDRRKTAFAFS

Query:  ASSIFKKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        ASSIFKKSKSMA+IVPRL+GRT+SES KK+ LGFWSRFLNRPRRKRMEFQ+VLMHSRT+V
Subjt:  ASSIFKKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV

TrEMBL top hitse value%identityAlignment
A0A0A0LJL6 Uncharacterized protein1.0e-3969.01Show/hide
Query:  MANFHKSKSDYDHR-----RNHCCKRHPNHRQSPGVCSLCLTEKLSRVLS-AASSR-KTSDSLSSSNTSSYYSSAS--SSSSCSSPYLYD-YNTD----R
        MANFH SKSD DHR     R+H C+RHPNH QSPGVCSLCLTEKLSR+++ AASSR K S+SLSSS++SSYYSS S  SSSS SSP LY  YN+D    R
Subjt:  MANFHKSKSDYDHR-----RNHCCKRHPNHRQSPGVCSLCLTEKLSRVLS-AASSR-KTSDSLSSSNTSSYYSSAS--SSSSCSSPYLYD-YNTD----R

Query:  RKTAFAFSASSIFKKSKSMASIVPRLKGRTDSESGKKNK---LGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        RKTAF FSASSIFKKSK+MA +  R    T+S+ GKK+    LGFWSRFLNR R KRMEFQEVLM SRTVV
Subjt:  RKTAFAFSASSIFKKSKSMASIVPRLKGRTDSESGKKNK---LGFWSRFLNRPRRKRMEFQEVLMHSRTVV

A0A1S3CQP1 SKI/DACH domain-containing protein 15.0e-3968.93Show/hide
Query:  MANFHKSKSDYD--------HRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASS--RKTSDSLSSSNTSSYYSS-ASSSSSCSS---PYLYDYNTD-
        MANFH SKSDYD        HR +H CK HPNH QSPGVCSLCLTEKLSR+LS A S   K S SLSSS +SSYYSS +SSSSSCSS   PY Y YN+D 
Subjt:  MANFHKSKSDYD--------HRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASS--RKTSDSLSSSNTSSYYSS-ASSSSSCSS---PYLYDYNTD-

Query:  --RRKTAFA-FSASSIFKKSKSMASIVPRLKGRTDSES--GKK---NKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV
          RRK AF  FSASSIFKKSKSMA    RLK  T +ES  GKK   N LGFWSRFLNRPR KRMEFQ+VLM SRTVV
Subjt:  --RRKTAFA-FSASSIFKKSKSMASIVPRLKGRTDSES--GKK---NKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV

A0A6J1FD38 uncharacterized protein LOC1114430181.5e-4674.19Show/hide
Query:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF
        MANFH+SKSDYD RR   CKRHP H QSPGVCSLCL EKLS+++S  SSRK SDSLSSS ++SYYSSASS SSCSSP   Y YNTDRRK AF FSASSIF
Subjt:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF

Query:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        KKS+SMA   PRL+  T+S+SGK N LGFWS+ L RPRRK MEF+EVLMHSRTVV
Subjt:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV

A0A6J1FKF2 uncharacterized protein LOC1114460763.2e-3867.5Show/hide
Query:  MANFHKSKSDYD----HRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSA-ASSRKTSDSLSSSNTS--SYYSSASSSSSCSSPYL-YDYNTDRRKTAFA
        MAN HKSKSDYD    HRR  CCKRHP HRQSPGVCSLCLTEKLS++LSA  SSRK SDSLSSS++   SYYSS SS SSCSSP   YD  T        
Subjt:  MANFHKSKSDYD----HRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSA-ASSRKTSDSLSSSNTS--SYYSSASSSSSCSSPYL-YDYNTDRRKTAFA

Query:  FSASSIFKKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRT
          ASSI+KKS+SMA    R +  TDS+SGKK+ LGFWSRFLNRPRRKRME +E LMHSR+
Subjt:  FSASSIFKKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRT

A0A6J1IHL9 uncharacterized protein LOC1114761657.0e-4977.42Show/hide
Query:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF
        MANFHKSKSDYD RR   CKRHP H QSPGVCSLCL EKLS+++SA SSRK SDSLSSS +SSYYSSASS SSCSSP   Y YNTDRRK AF FSASSIF
Subjt:  MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPY-LYDYNTDRRKTAFAFSASSIF

Query:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV
        KKS+SMA   PRLK  T+S+SGK + LGFWSRFL RPRRK MEF+EVLMHSRTVV
Subjt:  KKSKSMASIVPRLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22470.1 unknown protein3.8e-0740.2Show/hide
Query:  NFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRV----------LSAASSRKTSDSLSSSNT-----------SSYYSSASSSSSCSSPYLYD
        N    +SD     N+ CK+HP HRQSPG+CSLCL E LS++          +S++S  KT  S SS+++           SSYYSS    SSC SP  + 
Subjt:  NFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRV----------LSAASSRKTSDSLSSSNT-----------SSYYSSASSSSSCSSPYLYD

Query:  YN
        Y+
Subjt:  YN

AT1G35210.1 unknown protein9.1e-0941.27Show/hide
Query:  HKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSD----SLSSSNTSSYYSSASSS-SSCSSPYLYDYNTDRRKTAFAFSASSIF
        +K+K++   +    CK+HP HRQSPGVCSLCL E+LS  + AASSR+       S SSS TSS  S  SSS SSC SP +     DRR+       S   
Subjt:  HKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSD----SLSSSNTSSYYSSASSS-SSCSSPYLYDYNTDRRKTAFAFSASSIF

Query:  KKSKSMASIVPRLKGRTDSESGKKNK
        +K  S  +    +  + D E  +K K
Subjt:  KKSKSMASIVPRLKGRTDSESGKKNK

AT1G72240.1 unknown protein3.5e-0843.14Show/hide
Query:  KSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRV-----------LSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPYLYDY---NTDRRKTAF
        +S S+ +   N  CK+H  HRQSPG+CSLCLTE+LS++           +  A+   ++ + SSS+ SS YSS SS SSCSSP  Y Y     D +K +F
Subjt:  KSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRV-----------LSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPYLYDY---NTDRRKTAF

Query:  AF
         F
Subjt:  AF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACTTTCACAAATCCAAATCCGATTACGACCACCGCCGTAACCACTGCTGCAAACGGCATCCGAACCACCGCCAATCTCCCGGCGTTTGCTCCCTTTGTTTGAC
TGAAAAGCTCTCACGAGTCCTCTCCGCCGCTTCATCGCGTAAAACCTCCGATTCTCTTTCTTCTTCTAATACCTCTTCTTATTACTCCTCTGCTTCATCTTCTTCTTCCT
GTTCTTCTCCCTACCTTTACGATTACAATACGGATCGTCGTAAGACGGCTTTCGCGTTTTCTGCGTCTTCGATCTTTAAGAAGAGTAAATCGATGGCGTCGATTGTGCCG
AGATTGAAAGGAAGAACAGACAGTGAGAGTGGAAAGAAGAATAAGTTAGGGTTTTGGTCGAGGTTTTTGAATCGGCCGAGAAGGAAGAGGATGGAATTTCAGGAGGTTTT
GATGCACTCGAGAACTGTCGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACTTTCACAAATCCAAATCCGATTACGACCACCGCCGTAACCACTGCTGCAAACGGCATCCGAACCACCGCCAATCTCCCGGCGTTTGCTCCCTTTGTTTGAC
TGAAAAGCTCTCACGAGTCCTCTCCGCCGCTTCATCGCGTAAAACCTCCGATTCTCTTTCTTCTTCTAATACCTCTTCTTATTACTCCTCTGCTTCATCTTCTTCTTCCT
GTTCTTCTCCCTACCTTTACGATTACAATACGGATCGTCGTAAGACGGCTTTCGCGTTTTCTGCGTCTTCGATCTTTAAGAAGAGTAAATCGATGGCGTCGATTGTGCCG
AGATTGAAAGGAAGAACAGACAGTGAGAGTGGAAAGAAGAATAAGTTAGGGTTTTGGTCGAGGTTTTTGAATCGGCCGAGAAGGAAGAGGATGGAATTTCAGGAGGTTTT
GATGCACTCGAGAACTGTCGTATAG
Protein sequenceShow/hide protein sequence
MANFHKSKSDYDHRRNHCCKRHPNHRQSPGVCSLCLTEKLSRVLSAASSRKTSDSLSSSNTSSYYSSASSSSSCSSPYLYDYNTDRRKTAFAFSASSIFKKSKSMASIVP
RLKGRTDSESGKKNKLGFWSRFLNRPRRKRMEFQEVLMHSRTVV