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Lsi04G022570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G022570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncircumsporozoite protein-like
Genome locationchr04:29621008..29621553
RNA-Seq ExpressionLsi04G022570
SyntenyLsi04G022570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5444827.1 hypothetical protein F2P56_033926 [Juglans regia]7.4e-0452.17Show/hide
Query:  DPETAILFTEAPLPGVEVGVGACAGGVEIEEVGP-GVITGDSEGA--VGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEA
        DP   ILFT APLP  E  VG   GG+ IE VG  G + G   G   V GAGGE+AGA AG  V V   GA  +   D  G E  GV   GGG   GEEA
Subjt:  DPETAILFTEAPLPGVEVGVGACAGGVEIEEVGP-GVITGDSEGA--VGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEA

Query:  GGDLVGEEAGAAPGA
        GGDLV    GAAPGA
Subjt:  GGDLVGEEAGAAPGA

KGN60236.1 hypothetical protein Csa_001434 [Cucumis sativus]2.5e-4478.38Show/hide
Query:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDPETAILFT+APLPGV+VG GA AGG E+EE G GVI G+SEGAVGGAGGE AGA AGGEV V+G GA PDGAR ED    GGVATVGGGAD GEEAG
Subjt:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK
         DLVGEEAGAAPGAWPRE  IKAKRT KTKAEEEA+VV KN K RE++
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK

XP_022136125.1 circumsporozoite protein-like [Momordica charantia]9.3e-3969.48Show/hide
Query:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDP  A LF  APLPGVE G GAC GG  IE  G GV  G+SEGAVGGAGGE AGA+AGGEVPVEG G  P GA DEDGV+AGGVAT  GGA FG++AG
Subjt:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG
        G LVGEEAGAAPGAWP+EP  KA  TK TKA EEA+ VKNA+ RE    R+ EG
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG

XP_023520820.1 uncharacterized protein LOC111784314 [Cucurbita pepo subsp. pepo]4.7e-0651.14Show/hide
Query:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVAT
        MID ET+ILFT  PLPGVE G                      +GAV  A GE+ GA A GEVP++ EG  P GARD+DGVEAG VAT
Subjt:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVAT

TrEMBL top hitse value%identityAlignment
A0A0A0LJM1 Uncharacterized protein1.2e-4478.38Show/hide
Query:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDPETAILFT+APLPGV+VG GA AGG E+EE G GVI G+SEGAVGGAGGE AGA AGGEV V+G GA PDGAR ED    GGVATVGGGAD GEEAG
Subjt:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK
         DLVGEEAGAAPGAWPRE  IKAKRT KTKAEEEA+VV KN K RE++
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK

A0A6J1C301 circumsporozoite protein-like4.5e-3969.48Show/hide
Query:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDP  A LF  APLPGVE G GAC GG  IE  G GV  G+SEGAVGGAGGE AGA+AGGEVPVEG G  P GA DEDGV+AGGVAT  GGA FG++AG
Subjt:  MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG
        G LVGEEAGAAPGAWP+EP  KA  TK TKA EEA+ VKNA+ RE    R+ EG
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTTGAGGTCGGCGTAGGAGCCTGTGCTGGAGGAGTTGAGATCGAAGAAGTTGGACCTGG
AGTGATCACTGGTGACTCCGAAGGAGCAGTAGGTGGAGCCGGTGGAGAAGTAGCCGGCGCCAAAGCTGGTGGTGAAGTTCCGGTGGAAGGAGAGGGAGCCGCGCCCGATG
GAGCAAGGGATGAAGACGGAGTGGAAGCCGGAGGAGTCGCCACTGTGGGTGGAGGAGCCGATTTCGGCGAGGAGGCTGGCGGCGACTTGGTTGGAGAAGAGGCCGGTGCG
GCGCCCGGAGCTTGGCCAAGAGAGCCGACGATCAAAGCTAAGAGGACGAAGAAGACAAAGGCGGAGGAGGAAGCCATAGTGGTGAAGAATGCGAAGAGCAGAGAGAGGAA
GATGGAAGGGAAGTTTGAGTTGCAGAGGTTGAAGATGAGAGAAAAGGAGGGTTCTACAATGGCTTATACTTATATACTTATAAATATATATTTATATATAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTTGAGGTCGGCGTAGGAGCCTGTGCTGGAGGAGTTGAGATCGAAGAAGTTGGACCTGG
AGTGATCACTGGTGACTCCGAAGGAGCAGTAGGTGGAGCCGGTGGAGAAGTAGCCGGCGCCAAAGCTGGTGGTGAAGTTCCGGTGGAAGGAGAGGGAGCCGCGCCCGATG
GAGCAAGGGATGAAGACGGAGTGGAAGCCGGAGGAGTCGCCACTGTGGGTGGAGGAGCCGATTTCGGCGAGGAGGCTGGCGGCGACTTGGTTGGAGAAGAGGCCGGTGCG
GCGCCCGGAGCTTGGCCAAGAGAGCCGACGATCAAAGCTAAGAGGACGAAGAAGACAAAGGCGGAGGAGGAAGCCATAGTGGTGAAGAATGCGAAGAGCAGAGAGAGGAA
GATGGAAGGGAAGTTTGAGTTGCAGAGGTTGAAGATGAGAGAAAAGGAGGGTTCTACAATGGCTTATACTTATATACTTATAAATATATATTTATATATAATATAA
Protein sequenceShow/hide protein sequence
MIDPETAILFTEAPLPGVEVGVGACAGGVEIEEVGPGVITGDSEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAGGDLVGEEAGA
APGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRERKMEGKFELQRLKMREKEGSTMAYTYILINIYLYII