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Lsi04G022680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G022680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGRAM domain-containing protein
Genome locationchr04:29700977..29705969
RNA-Seq ExpressionLsi04G022680
SyntenyLsi04G022680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591689.1 hypothetical protein SDJN03_14035, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0852.5Show/hide
Query:  SVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTAANDWRLNVCLQLLASYANTISSSAKLALCGGDKPLLYEDGE
        SVAN AVRRI G AEVLTN GC K F+                           Y NT SSSAKLALCGGDK LLYE+GE
Subjt:  SVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTAANDWRLNVCLQLLASYANTISSSAKLALCGGDKPLLYEDGE

KAG7024570.1 hypothetical protein SDJN02_13388, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-0948.42Show/hide
Query:  ESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQ---ESGDLRECIKTAANDWRLNVCLQLLASYANTISSSAKLALCGGDKPLLYEDGE
        E+ L F  +   SVAN AVRRI G AEVL N GC K F+   E+   ++ +  +  D            Y NT SSSAKLALCGGDK LLYE+GE
Subjt:  ESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQ---ESGDLRECIKTAANDWRLNVCLQLLASYANTISSSAKLALCGGDKPLLYEDGE

XP_018447195.1 PREDICTED: GEM-like protein 1 [Raphanus sativus]2.9e-0429.34Show/hide
Query:  PTSVGVAASAPPPEFNPHVCPS--------------SSTSRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC
        P S   AA+  PPEFNP+V PS                  ++  + T+ A +    +   +   PSVA+AAV RIA   ++L   G EK+F+++    EC
Subjt:  PTSVGVAASAPPPEFNPHVCPS--------------SSTSRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC

Query:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
                      QL  +YA  +S+SA            KLA C  D PL Y++G+L    ++ ++
Subjt:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII

TrEMBL top hitse value%identityAlignment
A0A0D3BIK4 GRAM domain-containing protein9.2e-0431.29Show/hide
Query:  GVAASAPPPEFNPHVCPS--------SSTSRVKREYTQIASETESPLGFSVIWW------PSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTA
        G AA+  PPEFNP+V PS        S    + R     A  T+     S   W      PSVA+AAV RIA   ++L   G EK+F+++    EC    
Subjt:  GVAASAPPPEFNPHVCPS--------SSTSRVKREYTQIASETESPLGFSVIWW------PSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTA

Query:  ANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
                  QL  +YA  +S+SA            KLA C  D PL Y++G+     ++ ++
Subjt:  ANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII

A0A565ATW3 GRAM domain-containing protein5.4e-0430.87Show/hide
Query:  GVAASAPPPEFNPHVCPSSSTSRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTAANDWRLNVCLQLLA
        G  A+  PPE NP+V PS      K + T+ A +    +   +   PSVA+AAV RIA   +++   G EK+F+++ D   C+             QL  
Subjt:  GVAASAPPPEFNPHVCPSSSTSRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTAANDWRLNVCLQLLA

Query:  SYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
        SYA  +S+SA            KLA C  D PL Y++G+     ++ ++
Subjt:  SYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII

A0A6D2HIL3 GRAM domain-containing protein7.0e-0428.83Show/hide
Query:  GVAASAPPPEFNPHVCPSSST--------------SRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTA
        G AA+  PPE+NP+V PS +                ++  E T+ A +    +   +   PSVA+AAV RIA   ++L   G EK+F+++ D   C+   
Subjt:  GVAASAPPPEFNPHVCPSSST--------------SRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTA

Query:  ANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
                  QL  +YA  +S+SA            KLA C  D PL Y++G+     ++ ++
Subjt:  ANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII

A0A6J0KH19 GEM-like protein 11.4e-0429.34Show/hide
Query:  PTSVGVAASAPPPEFNPHVCPS--------------SSTSRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC
        P S   AA+  PPEFNP+V PS                  ++  + T+ A +    +   +   PSVA+AAV RIA   ++L   G EK+F+++    EC
Subjt:  PTSVGVAASAPPPEFNPHVCPS--------------SSTSRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC

Query:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
                      QL  +YA  +S+SA            KLA C  D PL Y++G+L    ++ ++
Subjt:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII

V4K8V0 GRAM domain-containing protein5.4e-0428.83Show/hide
Query:  GVAASAPPPEFNPHVCPSSST--------------SRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTA
        G AA+  PPEFNP+V PS +                ++  + T+ A +    +   +   PSVA+AAV RIA   ++L   G EK+F+++ D   C+   
Subjt:  GVAASAPPPEFNPHVCPSSST--------------SRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLRECIKTA

Query:  ANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
                  QL  ++A  +S+SA            KLA C  DKPL Y++G+     ++ ++
Subjt:  ANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII

SwissProt top hitse value%identityAlignment
Q9SE96 GEM-like protein 11.6e-0528.74Show/hide
Query:  PTSVGVAASAPPPEFNPHVCPS-------SSTSRVKREYTQIASE-TESPLGFSVIWW------PSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC
        P   G AA+  P E NP+V PS        S      ++ ++A++ T+     +  +W      PSVA+AAV RIA   ++L   G EK+F+++ D   C
Subjt:  PTSVGVAASAPPPEFNPHVCPS-------SSTSRVKREYTQIASE-TESPLGFSVIWW------PSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC

Query:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
        +             +LL +YA  +S+SA            KLA    D PL Y++GE  +  ++ ++
Subjt:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII

Arabidopsis top hitse value%identityAlignment
AT1G28200.1 FH interacting protein 11.1e-0628.74Show/hide
Query:  PTSVGVAASAPPPEFNPHVCPS-------SSTSRVKREYTQIASE-TESPLGFSVIWW------PSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC
        P   G AA+  P E NP+V PS        S      ++ ++A++ T+     +  +W      PSVA+AAV RIA   ++L   G EK+F+++ D   C
Subjt:  PTSVGVAASAPPPEFNPHVCPS-------SSTSRVKREYTQIASE-TESPLGFSVIWW------PSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC

Query:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII
        +             +LL +YA  +S+SA            KLA    D PL Y++GE  +  ++ ++
Subjt:  IKTAANDWRLNVCLQLLASYANTISSSA------------KLALCGGDKPLLYEDGELRIRGFWSII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAACTACCAAGGTTGGCGCTCTCCGGTCACTGGATCGTCATCTCCGACTTCATCCTGGCTTTTACTCCGACCTCCGTTGGAGTTGCTGCTTCAGCACCGCCTCC
TGAGTTCAATCCACATGTCTGTCCATCCAGCTCTACTTCCCGCGTCAAGCGCGAGTATACTCAAATCGCCTCTGAAACTGAATCTCCTCTAGGATTTAGCGTAATTTGGT
GGCCTAGTGTTGCTAATGCTGCCGTGCGAAGAATTGCAGGAGAAGCCGAAGTTCTCACTAACGTTGGTTGCGAGAAAATGTTCCAGGAGTCGGGAGACTTACGAGAATGT
ATCAAAACAGCAGCTAATGATTGGCGTCTAAACGTCTGTTTACAGCTGCTAGCCAGTTATGCGAACACAATATCGTCATCTGCAAAACTTGCACTGTGTGGCGGTGATAA
GCCTCTTCTGTATGAAGATGGCGAGCTTCGTATTCGAGGTTTTTGGAGCATCATAAATGGAAGGTGCCAGTGTTGTCTACCAGTTGATTATCGGTCAGGATTTTATGCTC
TGTCAAGAGCACAGAAAGGGTCCCAGGCCAATGAAGCATTGTGCAGAATGGACGATTATACTGAAGTTATTGTCGCAATGCAAAGGGGAGTTGGAAGCATACTGAAAGTT
AAGTATACCTCTGCCTTGGAAACAACATTGGAGGACTCCTTCCCGCTTTCGATTTGCAGGACCCAGTGGCTCACACTCTTGAATCTTGATCAAGGCGAATGTGTCATACG
CACTGCCGTAAGTTGTTACTTGTTAGACGCAGGGCATGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAACTACCAAGGTTGGCGCTCTCCGGTCACTGGATCGTCATCTCCGACTTCATCCTGGCTTTTACTCCGACCTCCGTTGGAGTTGCTGCTTCAGCACCGCCTCC
TGAGTTCAATCCACATGTCTGTCCATCCAGCTCTACTTCCCGCGTCAAGCGCGAGTATACTCAAATCGCCTCTGAAACTGAATCTCCTCTAGGATTTAGCGTAATTTGGT
GGCCTAGTGTTGCTAATGCTGCCGTGCGAAGAATTGCAGGAGAAGCCGAAGTTCTCACTAACGTTGGTTGCGAGAAAATGTTCCAGGAGTCGGGAGACTTACGAGAATGT
ATCAAAACAGCAGCTAATGATTGGCGTCTAAACGTCTGTTTACAGCTGCTAGCCAGTTATGCGAACACAATATCGTCATCTGCAAAACTTGCACTGTGTGGCGGTGATAA
GCCTCTTCTGTATGAAGATGGCGAGCTTCGTATTCGAGGTTTTTGGAGCATCATAAATGGAAGGTGCCAGTGTTGTCTACCAGTTGATTATCGGTCAGGATTTTATGCTC
TGTCAAGAGCACAGAAAGGGTCCCAGGCCAATGAAGCATTGTGCAGAATGGACGATTATACTGAAGTTATTGTCGCAATGCAAAGGGGAGTTGGAAGCATACTGAAAGTT
AAGTATACCTCTGCCTTGGAAACAACATTGGAGGACTCCTTCCCGCTTTCGATTTGCAGGACCCAGTGGCTCACACTCTTGAATCTTGATCAAGGCGAATGTGTCATACG
CACTGCCGTAAGTTGTTACTTGTTAGACGCAGGGCATGAAGATTGA
Protein sequenceShow/hide protein sequence
MSKLPRLALSGHWIVISDFILAFTPTSVGVAASAPPPEFNPHVCPSSSTSRVKREYTQIASETESPLGFSVIWWPSVANAAVRRIAGEAEVLTNVGCEKMFQESGDLREC
IKTAANDWRLNVCLQLLASYANTISSSAKLALCGGDKPLLYEDGELRIRGFWSIINGRCQCCLPVDYRSGFYALSRAQKGSQANEALCRMDDYTEVIVAMQRGVGSILKV
KYTSALETTLEDSFPLSICRTQWLTLLNLDQGECVIRTAVSCYLLDAGHED