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Lsi04G022930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G022930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:30079941..30080385
RNA-Seq ExpressionLsi04G022930
SyntenyLsi04G022930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591706.1 hypothetical protein SDJN03_14052, partial [Cucurbita argyrosperma subsp. sororia]8.6e-0867.31Show/hide
Query:  QFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL
        QFD       +S RK+ LRSVW AL R EKKTEKGESPS+TVPLCLRIT  L
Subjt:  QFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL

KAG7024588.1 hypothetical protein SDJN02_13406, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1167.21Show/hide
Query:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL
        L S +FM+SQFD       +S RK+ LRSVW ALIR EKKTEKGESPS+TVPLCLRIT  L
Subjt:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL

XP_022975998.1 uncharacterized protein LOC111476529 isoform X1 [Cucurbita maxima]1.2e-0963.93Show/hide
Query:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL
        L S +FM SQFD       +S RK+ LRSVW ALIR EKKTE  ESPS+TVPLCLRIT  L
Subjt:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL

XP_022975999.1 uncharacterized protein LOC111476529 isoform X2 [Cucurbita maxima]1.2e-0964.41Show/hide
Query:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITN
        L S +FM SQFD       +S RK+ LRSVW ALIR EKKTE  ESPS+TVPLCLRIT+
Subjt:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITN

TrEMBL top hitse value%identityAlignment
A0A6J1IKU1 uncharacterized protein LOC111476529 isoform X15.8e-1063.93Show/hide
Query:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL
        L S +FM SQFD       +S RK+ LRSVW ALIR EKKTE  ESPS+TVPLCLRIT  L
Subjt:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHL

A0A6J1IM83 uncharacterized protein LOC111476529 isoform X25.8e-1064.41Show/hide
Query:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITN
        L S +FM SQFD       +S RK+ LRSVW ALIR EKKTE  ESPS+TVPLCLRIT+
Subjt:  LDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACATCAAATTACTCTGCCTCTTCGTAGCCTGATACCAGCGTTTTTGGTCTCCCCGCGCGAGGCATCGCAGACAATCCATTTCTCTGTTCCAGTTTCCCGCAATGA
TTTTACCTCAATACTCGATTCTGGTGTTTTTATGGCTTCGCAGTTCGATCGCCTTTCTCCTGGTCAGAAAATGTCGTCTCGGAAGCTATTTCTCAGATCCGTCTGGTCGG
CTTTAATCCGCGGGGAGAAGAAAACTGAAAAAGGCGAGAGTCCAAGCGCAACCGTTCCTCTGTGCCTGCGAATCACTAATCATCTTGTTTCTAGCGTTTTCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACATCAAATTACTCTGCCTCTTCGTAGCCTGATACCAGCGTTTTTGGTCTCCCCGCGCGAGGCATCGCAGACAATCCATTTCTCTGTTCCAGTTTCCCGCAATGA
TTTTACCTCAATACTCGATTCTGGTGTTTTTATGGCTTCGCAGTTCGATCGCCTTTCTCCTGGTCAGAAAATGTCGTCTCGGAAGCTATTTCTCAGATCCGTCTGGTCGG
CTTTAATCCGCGGGGAGAAGAAAACTGAAAAAGGCGAGAGTCCAAGCGCAACCGTTCCTCTGTGCCTGCGAATCACTAATCATCTTGTTTCTAGCGTTTTCTTATGA
Protein sequenceShow/hide protein sequence
MKHQITLPLRSLIPAFLVSPREASQTIHFSVPVSRNDFTSILDSGVFMASQFDRLSPGQKMSSRKLFLRSVWSALIRGEKKTEKGESPSATVPLCLRITNHLVSSVFL