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Lsi04G023010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G023010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHydroxyproline-rich glycoprotein
Genome locationchr04:30180832..30182671
RNA-Seq ExpressionLsi04G023010
SyntenyLsi04G023010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037699 - Uncharacterized protein At5g65660-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591711.1 hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5684.5Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH  H HP IPP+T  FSPPDK SPIHT IWKENRP+SL+VLMPGDEVPR
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR

Query:  FIAMACPPCAAAALVEIVLQKPSQSIPDS
        FIAMACPPC AA LVEIV+QKPSQSI ++
Subjt:  FIAMACPPCAAAALVEIVLQKPSQSIPDS

XP_008466113.1 PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]3.2e-6088.89Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPP--QTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEV
        MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDHLHHHHPPIPP    A  SPPDK SPIHT IWKENRPQS+SVLMPGDEV
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPP--QTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEV

Query:  PRFIAMACPPC--AAAALVEIVLQKPSQSIPDSSL
        PRFIA+ACPPC  AAAALVEIV+QKPSQSI DSSL
Subjt:  PRFIAMACPPC--AAAALVEIVLQKPSQSIPDSSL

XP_022936981.1 uncharacterized protein At5g65660-like [Cucurbita moschata]2.2e-5686.51Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH  H HP IPP+T  FSPPDK SPIHT IWKENRP+SL+VLMPGDEVPR
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR

Query:  FIAMACPPCAAAALVEIVLQKPSQSI
        FIAMACPPC AA LVEIV+QKPSQSI
Subjt:  FIAMACPPCAAAALVEIVLQKPSQSI

XP_023536259.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]4.8e-5686.51Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH  H HP IPP+T  FSPPDK SPIHT IWKENRP SL+VLMPGDEVPR
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR

Query:  FIAMACPPCAAAALVEIVLQKPSQSI
        FIAMACPPC AA LVEIV+QKPSQSI
Subjt:  FIAMACPPCAAAALVEIVLQKPSQSI

XP_038899315.1 uncharacterized protein At5g65660-like [Benincasa hispida]5.0e-6996.95Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR
        MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTA FSPPDKISPIHTKIW+ENRPQSLSVLMPGDEVPR
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR

Query:  FIAMACPPCAAAALVEIVLQKPSQSIPDSSL
        FIAMACPPCAAAALVEIV+QKPSQS PDSSL
Subjt:  FIAMACPPCAAAALVEIVLQKPSQSIPDSSL

TrEMBL top hitse value%identityAlignment
A0A1S3CQS4 uncharacterized protein At5g65660-like1.6e-6088.89Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPP--QTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEV
        MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDHLHHHHPPIPP    A  SPPDK SPIHT IWKENRPQS+SVLMPGDEV
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPP--QTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEV

Query:  PRFIAMACPPC--AAAALVEIVLQKPSQSIPDSSL
        PRFIA+ACPPC  AAAALVEIV+QKPSQSI DSSL
Subjt:  PRFIAMACPPC--AAAALVEIVLQKPSQSIPDSSL

A0A5D3E545 Uncharacterized protein1.6e-6088.89Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPP--QTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEV
        MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDHLHHHHPPIPP    A  SPPDK SPIHT IWKENRPQS+SVLMPGDEV
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPP--QTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEV

Query:  PRFIAMACPPC--AAAALVEIVLQKPSQSIPDSSL
        PRFIA+ACPPC  AAAALVEIV+QKPSQSI DSSL
Subjt:  PRFIAMACPPC--AAAALVEIVLQKPSQSIPDSSL

A0A6J1CGJ4 uncharacterized protein At5g65660-like3.4e-4773.13Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR
        M+YD+REAQDPASLSFPVGLVLLLTF FCMCCFFSCCLHW+KLRSFLGCPD  H H PPIPP+ A  SPPDKI P+HT     N+ QSL V+MPGDE PR
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR

Query:  FIAMACPPCAAAA----LVEIVLQKPSQSIPDSS
        FIAMACPPCAAA      V++++QKP QS PDSS
Subjt:  FIAMACPPCAAAA----LVEIVLQKPSQSIPDSS

A0A6J1F906 uncharacterized protein At5g65660-like1.0e-5686.51Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH  H HP IPP+T  FSPPDK SPIHT IWKENRP+SL+VLMPGDEVPR
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR

Query:  FIAMACPPCAAAALVEIVLQKPSQSI
        FIAMACPPC AA LVEIV+QKPSQSI
Subjt:  FIAMACPPCAAAALVEIVLQKPSQSI

A0A6J1IEI5 uncharacterized protein At5g65660-like3.0e-5686.51Show/hide
Query:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH  H HP IPP+T  FSPPDK SPIHT IWKENRP+SL+VLMPGDEVPR
Subjt:  MEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPR

Query:  FIAMACPPCAAAALVEIVLQKPSQSI
        FIAMACPPC AA LVEIV+QKPSQSI
Subjt:  FIAMACPPCAAAALVEIVLQKPSQSI

SwissProt top hitse value%identityAlignment
Q9LSK9 Uncharacterized protein At5g656603.9e-0836.97Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPPCA
        SL FP+G  LLL  +F +   FSCC HW+K RS       L +  P    ++  + P      +        +PQ+LS  VLMPGD  P+FIA+ C PCA
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPPCA

Query:  --AAALVEIVLQKPSQSIP
              + + +Q P QS P
Subjt:  --AAALVEIVLQKPSQSIP

Arabidopsis top hitse value%identityAlignment
AT5G65660.1 hydroxyproline-rich glycoprotein family protein2.8e-0936.97Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPPCA
        SL FP+G  LLL  +F +   FSCC HW+K RS       L +  P    ++  + P      +        +PQ+LS  VLMPGD  P+FIA+ C PCA
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPPCA

Query:  --AAALVEIVLQKPSQSIP
              + + +Q P QS P
Subjt:  --AAALVEIVLQKPSQSIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATACAAAAATGGAGTATGATAATCGCGAAGCACAGGATCCGGCCTCTCTAAGCTTTCCAGTTGGTTTGGTTCTTTTGTTGACATTTTTGTTCTGCATGTGTTG
TTTTTTTTCTTGTTGCCTTCACTGGGAAAAGCTCCGATCATTTCTTGGTTGTCCCGATCATCTCCACCACCACCATCCTCCTATTCCGCCGCAAACTGCCGACTTCTCGC
CGCCCGATAAAATTTCGCCAATCCATACGAAGATATGGAAGGAGAACCGGCCGCAAAGCCTGTCGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCA
TGTCCGCCGTGTGCGGCGGCGGCGTTGGTGGAAATTGTACTACAGAAACCTTCACAGAGTATTCCGGATTCTTCTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATAACCCATTACCCATGTCGAATAAAAGAAATAATATAATAATAATAATAAAGTTTGTAGGGAAAATAAAAAAAATAAAAATACGTTTAATATTTTGTCCATAAATTTAA
ATTGTTGCCACTCGCCATCAACAAATTCTGGAGAAGTTGATGAGAGATACAAAAATGGAGTATGATAATCGCGAAGCACAGGATCCGGCCTCTCTAAGCTTTCCAGTTGG
TTTGGTTCTTTTGTTGACATTTTTGTTCTGCATGTGTTGTTTTTTTTCTTGTTGCCTTCACTGGGAAAAGCTCCGATCATTTCTTGGTTGTCCCGATCATCTCCACCACC
ACCATCCTCCTATTCCGCCGCAAACTGCCGACTTCTCGCCGCCCGATAAAATTTCGCCAATCCATACGAAGATATGGAAGGAGAACCGGCCGCAAAGCCTGTCGGTGTTG
ATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCATGTCCGCCGTGTGCGGCGGCGGCGTTGGTGGAAATTGTACTACAGAAACCTTCACAGAGTATTCCGGATTC
TTCTCTGTAGCTCTCTATAATTAATTAATGCCTTTTTTTTTGTAAGCTTTTTGTGCGTATATAATTATATTTTATACATATGCATTTGAATATTCCAATATTCCTTTGGA
ATTTCTAGCAATGTTCAAATGTTTGTCTTTGTTTCGTGAGTTAGATATCGTCACTTTAATTTTATTCTTCTTAAATGACAAAACAACACTAATTAATTTTATTCCTTCC
Protein sequenceShow/hide protein sequence
MRDTKMEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHPPIPPQTADFSPPDKISPIHTKIWKENRPQSLSVLMPGDEVPRFIAMA
CPPCAAAALVEIVLQKPSQSIPDSSL