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Lsi04G023430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G023430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRetrotransposon-derived protein PEG10, putative
Genome locationchr04:30619886..30620730
RNA-Seq ExpressionLsi04G023430
SyntenyLsi04G023430
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038606.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]1.5e-3385.71Show/hide
Query:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV
        ME VEAES+DEAMR SKT +RCAKAAFLLSSLKSSQNR LRAT  EQAKE++MLRK VGDLKI+LARE LRNKRIKLCGLMEFVLQLLLVISLSS  LFV
Subjt:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV

Query:  AFKFV
        AFKFV
Subjt:  AFKFV

KAG7031715.1 hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-3382.69Show/hide
Query:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA
        ME VEAESRDEAMRSKT  RCAKAAFL+SS KS QNR+LRA+VDE+AKEKE LRK VGDLKIELA E  RN+RIKLCGLMEFVLQLLLVISLSSFFLF+A
Subjt:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA

Query:  FKFV
        FK +
Subjt:  FKFV

XP_011652624.1 uncharacterized protein LOC105435036 [Cucumis sativus]7.0e-3182.35Show/hide
Query:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV
        ME VEAE+++EAMR SKT +RCAKAAFLLSSLKSSQNR LRATV EQAKEK+ML K VGDLKI+LARE +RNKRIKLCGLMEFVLQLLLV+SLSS FLF 
Subjt:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV

Query:  AF
        AF
Subjt:  AF

XP_022138206.1 uncharacterized protein LOC111009432 [Momordica charantia]7.5e-3382.35Show/hide
Query:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA
        MEKVEAESRDEAMRS+T  RCAKAAF+LSSLKSSQN +LRATV E  KEKE LRK +GDLK+ELARE LRNKRIKLCGLMEFVLQ+LLVI+LSSFF F+A
Subjt:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA

Query:  FK
        FK
Subjt:  FK

XP_022940284.1 uncharacterized protein LOC111445952 [Cucurbita moschata]1.2e-3384.62Show/hide
Query:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA
        ME VEAESRDEAMRSKT  RCAKAAFL+SS KS QNR+LRA+VDEQAKEKE LRK VGDLKIELA E  RNKRIKLCGLMEFVLQLLLVISLSSFFLF+A
Subjt:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA

Query:  FKFV
        FK +
Subjt:  FKFV

TrEMBL top hitse value%identityAlignment
A0A0A0LJY1 Uncharacterized protein3.4e-3182.35Show/hide
Query:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV
        ME VEAE+++EAMR SKT +RCAKAAFLLSSLKSSQNR LRATV EQAKEK+ML K VGDLKI+LARE +RNKRIKLCGLMEFVLQLLLV+SLSS FLF 
Subjt:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV

Query:  AF
        AF
Subjt:  AF

A0A5D3E7E0 Putative Retrotransposon-derived protein PEG107.3e-3485.71Show/hide
Query:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV
        ME VEAES+DEAMR SKT +RCAKAAFLLSSLKSSQNR LRAT  EQAKE++MLRK VGDLKI+LARE LRNKRIKLCGLMEFVLQLLLVISLSS  LFV
Subjt:  MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFV

Query:  AFKFV
        AFKFV
Subjt:  AFKFV

A0A5N6R7K9 Uncharacterized protein2.3e-1955.21Show/hide
Query:  EAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA
        + E+ D+A++SK  VRCAKAAFLLS+LKSS NR++ +T ++Q +E E++R+ +G+LK+ELARE L+N+RIKLCGLME VL++ +V+ +S+FFL ++
Subjt:  EAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA

A0A6J1C920 uncharacterized protein LOC1110094323.6e-3382.35Show/hide
Query:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA
        MEKVEAESRDEAMRS+T  RCAKAAF+LSSLKSSQN +LRATV E  KEKE LRK +GDLK+ELARE LRNKRIKLCGLMEFVLQ+LLVI+LSSFF F+A
Subjt:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA

Query:  FK
        FK
Subjt:  FK

A0A6J1FJM5 uncharacterized protein LOC1114459525.6e-3484.62Show/hide
Query:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA
        ME VEAESRDEAMRSKT  RCAKAAFL+SS KS QNR+LRA+VDEQAKEKE LRK VGDLKIELA E  RNKRIKLCGLMEFVLQLLLVISLSSFFLF+A
Subjt:  MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA

Query:  FKFV
        FK +
Subjt:  FKFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78172.1 unknown protein3.6e-0943.48Show/hide
Query:  SRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDE--QAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFL
        S+DE  R  T +RCA+A  LL SL SS+      T+D   + +EK   R+ + DL+ +L    ++  RIKLCGLME +L + LV+ LS+FFL
Subjt:  SRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDE--QAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCG
CCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAGGAATAAGAGGA
TCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
CCCAACTTTTCAAATAACTCAACACTAAAAATCACTGGTTGCGTTCTTCTCAAGTACGAGTATTGTTACAAGAAATTACCTTCATTTCGGGCTCCAATCAGCGTACAGTT
GTAGCAGGATCATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCC
TCCCAAAATCGCCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAG
GAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGAAATC
TGATGGAATCAATAGTAGGACCATGGAGTTTGCTTGTGGAGCAACCTTAACCAGTTCACAAAGTACATTACTGGATTTATCGGCTTCCATTCTCAATTTGTAGTTGTAGT
GCAGGTTTGAATGTGTGGATTTCTTGGACAAGCTATGTAGAGTTCTTAAATTTGAAAGGCTTCAGAGAACTTCCTTAATTACTTCGTTCCATTGAAATCGGCCCTTTCCA
GGACCAGAGAAACTTCAATATATTGTGGAGGTGAAATGCTTCAAACGAATTGTTATATTATTCCAAGTTTTTGATATTTC
Protein sequenceShow/hide protein sequence
MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV