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Lsi04G023770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G023770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr04:30904875..30907450
RNA-Seq ExpressionLsi04G023770
SyntenyLsi04G023770
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142617.1 uncharacterized protein LOC101216487 [Cucumis sativus]1.3e-3994.74Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA EA LNDS S S
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

XP_008444129.1 PREDICTED: uncharacterized protein LOC103487570 isoform X2 [Cucumis melo]1.5e-4094.74Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA ++SLNDS SHS
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

XP_022138625.1 uncharacterized protein LOC111009737 [Momordica charantia]1.9e-3893.68Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGS ENVKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSAA+AS+ DSESHS
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

XP_023525801.1 uncharacterized protein LOC111789310 [Cucurbita pepo subsp. pepo]2.9e-3992.63Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQENVKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA E S+ +S+SHS
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

XP_038899123.1 uncharacterized protein LOC120086511 [Benincasa hispida]9.5e-43100Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

TrEMBL top hitse value%identityAlignment
A0A0A0L1X1 Uncharacterized protein6.2e-4094.74Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA EA LNDS S S
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

A0A1S3B9M1 uncharacterized protein LOC103487570 isoform X27.4e-4194.74Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA ++SLNDS SHS
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

A0A6J1C9Z5 uncharacterized protein LOC1110097379.0e-3993.68Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGS ENVKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSAA+AS+ DSESHS
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

A0A6J1FFR1 uncharacterized protein LOC1114435343.4e-3893.68Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSAAEAS+N+SES S
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

A0A6J1FMK1 uncharacterized protein LOC1114467691.2e-3891.58Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA E S+ +S SHS
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21930.1 unknown protein2.0e-3574.74Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS
        MGSQENVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE QMKLL+++QN+    +  ++E  S
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

AT3G42150.1 unknown protein3.0e-3473.12Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSES
        MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL+++QN+    +  ++E+
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSES

AT3G42150.2 unknown protein3.0e-3473.12Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSES
        MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL+++QN+    +  ++E+
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSES

AT3G42150.3 unknown protein3.0e-3473.12Show/hide
Query:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSES
        MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL+++QN+    +  ++E+
Subjt:  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCCAAGAAAATGTTAAACATATTGAGGAGTGCTCAGTTTCAAATGCGTTGGGCACTTGGGTATTCTCAGTAGCAGGAGCATTGCTAGCAATTCCAGTGGGCAT
AAAGAGGAAGTCACTTGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAGCATGCTGAGCGTCAAATGA
AGCTATTAGAAGAAGCTCAAAACTCTGCAGCCGAAGCTTCTCTTAACGATTCCGAATCCCATTCTTGA
mRNA sequenceShow/hide mRNA sequence
TCATATTGCATTGCAGTTCACAACTCGCCATAGATGGGAAACAAAGGGGCCGGGGCCGTCAATAATCCACAGCAACCGATTCTAGGGCTCATGATTCCAACGGGGAACCA
TAAAATCCACCGTCCCAGATCGTAGTTCTGTAAGTTCCTCGCCGGAGAAGCGTCATCTCCACCGTCAACCACTGTTTCGCCTGCCGTTTCTCATTAGTAATTGAGTTCAT
TTAATCGAGGAAGAGATATGGGAAGCCAAGAAAATGTTAAACATATTGAGGAGTGCTCAGTTTCAAATGCGTTGGGCACTTGGGTATTCTCAGTAGCAGGAGCATTGCTA
GCAATTCCAGTGGGCATAAAGAGGAAGTCACTTGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAGCA
TGCTGAGCGTCAAATGAAGCTATTAGAAGAAGCTCAAAACTCTGCAGCCGAAGCTTCTCTTAACGATTCCGAATCCCATTCTTGATATCATCCTTACAAGGTTTTATCAC
TCTCTCGTGTCGTGCCTAACGACCTTTTCTTCCTCAACTGTGTTAGATGATGAATACCTTTGTGGCATGGCCCTTGGCTGGGATTGTTCAGCCTTCTTTCAAACCACAGT
GACATTGCATGAGTTATGGTTTCACGTAATCAACTGCCTTGACTTTATTTATTTGCAATAAAATTATACTTGTAACCATGATTCTCATGTGCATTAAGCTTTTGTAGACA
ACTTTGAGAAAATAGTTTCATTATCCCCGTGAAGAATTCACAGTTTCAGAAGTAAATAAGTTCGAAATTCAATTAAATCTTTATACACAACGTTCTCCACTTCCC
Protein sequenceShow/hide protein sequence
MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS