CuGenDBv2

Gene ID	Lsi04G023860
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Usp domain-containing protein
Genome location	chr04:31011933..31012172
RNA-Seq Expression	Lsi04G023860
Synteny	Lsi04G023860
Gene Ontology terms	NA
InterPro domains	IPR006016 - UspA IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142622.1 uncharacterized protein LOC101217745 [Cucumis sativus]

6.9e-31

92.68

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD--SSSSFLANSLGYLCKASRPEV
        MEGFERYGKKRVMVVVDHTS SKHAMLWALT+VANKGDL TLLHIVSHS NRLSEMPSD  SSSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD--SSSSFLANSLGYLCKASRPEV

XP_008444147.1 PREDICTED: uncharacterized protein LOC103487581 [Cucumis melo]

1.5e-30

92.59

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD-SSSSFLANSLGYLCKASRPEV
        MEGFERYGKKRVMVVVDHTS SKHAMLWALT+VANKGDL TLLHIVSHS NRLSEMPS+ SSSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD-SSSSFLANSLGYLCKASRPEV

XP_022940999.1 uncharacterized protein LOC111446414 [Cucurbita moschata]

4.5e-30

89.87

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
        MEGFER+GKKRVMVVVDH+SQSKHAMLWALT+VANKGDLFTLLHIVSHSN+LSE P   SSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

XP_023523706.1 uncharacterized protein LOC111787863 [Cucurbita pepo subsp. pepo]

1.5e-30

91.14

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
        MEGFERYGKKRVMVVVDH+SQSKHAMLWALT+VANKGDLFTLLHIVSHSN+LSE P   SSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

XP_038898922.1 uncharacterized protein LOC120086377 [Benincasa hispida]

5.1e-34

96.2

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
        ME FERYGKKRVMVVVDHTSQSKHAM+WALT+VANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYK7 Usp domain-containing protein

3.4e-31

92.68

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD--SSSSFLANSLGYLCKASRPEV
        MEGFERYGKKRVMVVVDHTS SKHAMLWALT+VANKGDL TLLHIVSHS NRLSEMPSD  SSSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD--SSSSFLANSLGYLCKASRPEV

A0A1S3B978 uncharacterized protein LOC103487581

7.5e-31

92.59

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD-SSSSFLANSLGYLCKASRPEV
        MEGFERYGKKRVMVVVDHTS SKHAMLWALT+VANKGDL TLLHIVSHS NRLSEMPS+ SSSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD-SSSSFLANSLGYLCKASRPEV

A0A5A7TPE6 UspA

7.5e-31

92.59

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD-SSSSFLANSLGYLCKASRPEV
        MEGFERYGKKRVMVVVDHTS SKHAMLWALT+VANKGDL TLLHIVSHS NRLSEMPS+ SSSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHS-NRLSEMPSD-SSSSFLANSLGYLCKASRPEV

A0A6J1FLX8 uncharacterized protein LOC111446414

2.2e-30

89.87

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
        MEGFER+GKKRVMVVVDH+SQSKHAMLWALT+VANKGDLFTLLHIVSHSN+LSE P   SSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

A0A6J1IYE7 uncharacterized protein LOC111480323

8.3e-30

89.87

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Query:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
        MEGFER GKKRVMVVVDH+SQSKHAMLWALT+VANKGDLFTLLHIVSHSN+LSE P   SSSFLANSLGYLCKASRPEV
Subjt:  MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G44760.1 Adenine nucleotide alpha hydrolases-like superfamily protein

6.1e-17

61.43

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Query:  KRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
        KRVMVVVD +S+SKHAM+WALT++ NKGDL TLLH+VS        P D ++  LA SLG LCKA +PEV
Subjt:  KRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

AT1G69080.1 Adenine nucleotide alpha hydrolases-like superfamily protein

9.1e-05

32.14

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Query:  KRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIV----SHSNRLS----------EMPSDSSSSFLANSLGYLCKASRPEV
        +R++VVVD  S++K+A+LW L++ A   D   LLH +    S S  L+          + P+ S +    ++L  +C+  RPEV
Subjt:  KRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIV----SHSNRLS----------EMPSDSSSSFLANSLGYLCKASRPEV

AT2G03720.1 Adenine nucleotide alpha hydrolases-like superfamily protein

9.1e-05

36.62

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Query:  MVVVDHTSQSKHAMLWALTNVANKGDLFTLLHI----VSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV
        MVVVD TSQ+K+A+ WALT+     D  TLLH+    V  +   ++   +S +  L + L   C+  +P V
Subjt:  MVVVDHTSQSKHAMLWALTNVANKGDLFTLLHI----VSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

Sequences

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CDS sequence

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ATGGAAGGGTTTGAGAGGTACGGTAAGAAGAGGGTGATGGTGGTGGTGGATCATACATCGCAGTCCAAGCATGCTATGTTGTGGGCTCTTACTAATGTGGCCAATAAGGG
TGATTTGTTCACTCTTCTTCATATTGTTTCTCACTCAAACAGGCTCTCTGAAATGCCTTCTGATTCTTCTTCCTCATTTCTTGCTAACTCTCTTGGCTACCTCTGCAAAG
CTTCTAGACCTGAGGTATAA

mRNA sequence

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Protein sequence

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MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV

Lsi04G023860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome